RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 UHRF1BP1LA0JNW5 1464 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 TMF1P82094 1093 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 TERF2Q15554 542 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 CC2D1BQ5T0F9 858 aaKnown RBP10.23□□□□□ -0.77
SMCO1-202ENST00000452776 MCTP1Q6DN14 999 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 TSPY26PQ9H489 355 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 DDX41Q9UJV9 622 aaKnown RBP10.23□□□□□ -0.77
SMCO1-202ENST00000452776 ABCC2Q92887 1545 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 PIK3C2GO75747 1445 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 DAPK1P53355 1430 aa10.23□□□□□ -0.77
SMCO1-202ENST00000452776 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
SMCO1-202ENST00000452776 GABBR2O75899 941 aa10.22□□□□□ -0.77
SMCO1-202ENST00000452776 CT47B1P0C2W7 299 aaPredicted RBP10.22□□□□□ -0.77
SMCO1-202ENST00000452776 SSFA2P28290 1259 aa10.22□□□□□ -0.77
SMCO1-202ENST00000452776 SECISBP2LQ93073 1101 aaKnown RBP10.22□□□□□ -0.77
SMCO1-202ENST00000452776 ZNF622Q969S3 477 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMCO1-202ENST00000452776 PCDHB15Q9Y5E8 787 aa10.22□□□□□ -0.77
SMCO1-202ENST00000452776 PZPP20742 1482 aa10.22□□□□□ -0.77
SMCO1-202ENST00000452776 GOLGA6L6A8MZA4 724 aa10.21□□□□□ -0.77
SMCO1-202ENST00000452776 PPP2R1AP30153 589 aa10.21□□□□□ -0.77
SMCO1-202ENST00000452776 TNNT3P45378 269 aaPredicted RBP10.21□□□□□ -0.77
SMCO1-202ENST00000452776 KRT222Q8N1A0 295 aa10.21□□□□□ -0.77
SMCO1-202ENST00000452776 KNSTRNQ9Y448 316 aa10.21□□□□□ -0.77
SMCO1-202ENST00000452776 KIF21AQ7Z4S6 1674 aa10.21□□□□□ -0.77
SMCO1-202ENST00000452776 C19orf67A6NJJ6 358 aa10.21□□□□□ -0.78
SMCO1-202ENST00000452776 RABEP1Q15276 862 aa10.21□□□□□ -0.78
SMCO1-202ENST00000452776 PANK1Q8TE04 598 aa10.21□□□□□ -0.78
SMCO1-202ENST00000452776 CYP2E1P05181 493 aaPredicted RBP10.2□□□□□ -0.78
SMCO1-202ENST00000452776 U2AF2P26368 475 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMCO1-202ENST00000452776 CTNNA3Q9UI47 895 aa10.2□□□□□ -0.78
SMCO1-202ENST00000452776 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
SMCO1-202ENST00000452776 COL17A1Q9UMD9 1497 aaPredicted RBP10.19□□□□□ -0.78
SMCO1-202ENST00000452776 RARSP54136 660 aaKnown RBP10.19□□□□□ -0.78
SMCO1-202ENST00000452776 PKD2Q13563 968 aa10.19□□□□□ -0.78
SMCO1-202ENST00000452776 BMP2KLQ5H9B9 411 aa10.19□□□□□ -0.78
SMCO1-202ENST00000452776 GPRASP1Q5JY77 1395 aa10.19□□□□□ -0.78
SMCO1-202ENST00000452776 MVPQ14764 893 aaKnown RBP10.19□□□□□ -0.78
SMCO1-202ENST00000452776 RNF20Q5VTR2 975 aa10.19□□□□□ -0.78
SMCO1-202ENST00000452776 WDR63Q8IWG1 891 aa10.19□□□□□ -0.78
SMCO1-202ENST00000452776 ABCC5O15440 1437 aa10.18□□□□□ -0.78
SMCO1-202ENST00000452776 CUL7Q14999 1698 aa10.18□□□□□ -0.78
SMCO1-202ENST00000452776 LAMC1P11047 1609 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 DNMT1P26358 1616 aaKnown RBP10.17□□□□□ -0.78
SMCO1-202ENST00000452776 SMTNL1A8MU46 457 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 PRPF40AO75400 957 aaKnown RBP10.17□□□□□ -0.78
SMCO1-202ENST00000452776 APPP05067 770 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 OSCARQ8IYS5 282 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 BRMS1Q9HCU9 246 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
SMCO1-202ENST00000452776 FBXO3Q9UK99 471 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 DDX19BQ9UMR2 479 aa10.17□□□□□ -0.78
SMCO1-202ENST00000452776 KANK1Q14678 1352 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 APAF1O14727 1248 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 ZKSCAN2Q63HK3 967 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 C14orf37Q86TY3 774 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 KIAA1524Q8TCG1 905 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 TRIM34Q9BYJ4 488 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 HDAC5Q9UQL6 1122 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 KDM5DQ9BY66 1539 aa10.16□□□□□ -0.78
SMCO1-202ENST00000452776 ERBINQ96RT1 1412 aa10.15□□□□□ -0.78
SMCO1-202ENST00000452776 SYCE3A1L190 88 aa10.15□□□□□ -0.78
SMCO1-202ENST00000452776 TEX35Q5T0J7 233 aa10.15□□□□□ -0.78
SMCO1-202ENST00000452776 GAS2L2Q8NHY3 880 aa10.15□□□□□ -0.78
SMCO1-202ENST00000452776 KIF18AQ8NI77 898 aa10.15□□□□□ -0.78
SMCO1-202ENST00000452776 KIF2CQ99661 725 aa10.15□□□□□ -0.78
SMCO1-202ENST00000452776 GRIN2AQ12879 1464 aa10.15□□□□□ -0.79
SMCO1-202ENST00000452776 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.79
SMCO1-202ENST00000452776 ST18O60284 1047 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 REC8O95072 547 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 NUCB1Q02818 461 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 DZIP1LQ8IYY4 767 aaKnown RBP10.14□□□□□ -0.79
SMCO1-202ENST00000452776 GOLGA6L1Q8N7Z2 621 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 ZNF397Q8NF99 534 aaPredicted RBP10.14□□□□□ -0.79
SMCO1-202ENST00000452776 GPT2Q8TD30 523 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 FAM53CQ9NYF3 392 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 RAD50Q92878 1312 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 HTATSF1O43719 755 aaKnown RBP10.14□□□□□ -0.79
SMCO1-202ENST00000452776 SLFNL1Q499Z3 407 aa10.14□□□□□ -0.79
SMCO1-202ENST00000452776 CWC15Q9P013 229 aaKnown RBP10.14□□□□□ -0.79
SMCO1-202ENST00000452776 FEZ2Q9UHY8 353 aaPredicted RBP10.14□□□□□ -0.79
SMCO1-202ENST00000452776 REREQ9P2R6 1566 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 MCM2P49736 904 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 CCDC27Q2M243 656 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 WWC1Q8IX03 1113 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 TXLNBQ8N3L3 684 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 SLC26A8Q96RN1 970 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 RASSF4Q9H2L5 321 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 TMEM63CQ9P1W3 806 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 SHROOM2Q13796 1616 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 ADGRL2O95490 1459 aa10.13□□□□□ -0.79
SMCO1-202ENST00000452776 CAPN2P17655 700 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
SMCO1-202ENST00000452776 NCBP1Q09161 790 aaKnown RBP10.12□□□□□ -0.79
SMCO1-202ENST00000452776 BMS1Q14692 1282 aaKnown RBP10.12□□□□□ -0.79
SMCO1-202ENST00000452776 CEP120Q8N960 986 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 TSC1Q92574 1164 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms