RNA–Protein interactions for RNA: ENST00000451497.1

HMGB1P5-202, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 985 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-202ENST00000451497 RFX1P22670 979 aa8.69□□□□□ -1.02
HMGB1P5-202ENST00000451497 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
HMGB1P5-202ENST00000451497 GJD4Q96KN9 370 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P5-202ENST00000451497 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
HMGB1P5-202ENST00000451497 PCDHGC3Q9UN70 934 aa8.68□□□□□ -1.02
HMGB1P5-202ENST00000451497 SLC10A3P09131 477 aa8.67□□□□□ -1.02
HMGB1P5-202ENST00000451497 IRF5Q13568 498 aa8.67□□□□□ -1.02
HMGB1P5-202ENST00000451497 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
HMGB1P5-202ENST00000451497 PBXIP1Q96AQ6 731 aa8.67□□□□□ -1.02
HMGB1P5-202ENST00000451497 C11orf95C9JLR9 678 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 PRR20EP86478 221 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 PRR20CP86479 221 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 PRR20DP86480 221 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 PRR20BP86481 221 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 PRR20AP86496 221 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 VAC14Q08AM6 782 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 HLA-CQ95604 372 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 DACH1Q9UI36 760 aa8.66□□□□□ -1.02
HMGB1P5-202ENST00000451497 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
HMGB1P5-202ENST00000451497 GGCXP38435 758 aa8.65□□□□□ -1.02
HMGB1P5-202ENST00000451497 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
HMGB1P5-202ENST00000451497 PRR14Q9BWN1 585 aa8.65□□□□□ -1.02
HMGB1P5-202ENST00000451497 GMPR2Q9P2T1 348 aaKnown RBP8.65□□□□□ -1.02
HMGB1P5-202ENST00000451497 PATL2C9JE40 543 aaKnown RBP8.64□□□□□ -1.03
HMGB1P5-202ENST00000451497 SLC19A1P41440 591 aa8.64□□□□□ -1.03
HMGB1P5-202ENST00000451497 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
HMGB1P5-202ENST00000451497 GZF1Q9H116 711 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P5-202ENST00000451497 FUT2Q10981 343 aa8.63□□□□□ -1.03
HMGB1P5-202ENST00000451497 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
HMGB1P5-202ENST00000451497 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
HMGB1P5-202ENST00000451497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P5-202ENST00000451497 CFAP99D6REC4 459 aa8.62□□□□□ -1.03
HMGB1P5-202ENST00000451497 CFHP08603 1231 aa8.62□□□□□ -1.03
HMGB1P5-202ENST00000451497 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
HMGB1P5-202ENST00000451497 TNFRSF10AO00220 468 aa8.61□□□□□ -1.03
HMGB1P5-202ENST00000451497 SOX11P35716 441 aa8.61□□□□□ -1.03
HMGB1P5-202ENST00000451497 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
HMGB1P5-202ENST00000451497 KMT5BQ4FZB7 885 aa8.61□□□□□ -1.03
HMGB1P5-202ENST00000451497 ADAMTS19Q8TE59 1207 aa8.61□□□□□ -1.03
HMGB1P5-202ENST00000451497 LMOD1P29536 600 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P5-202ENST00000451497 SEMA3FQ13275 785 aa8.6□□□□□ -1.03
HMGB1P5-202ENST00000451497 PRR7Q8TB68 274 aa8.6□□□□□ -1.03
HMGB1P5-202ENST00000451497 EMID1Q96A84 441 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P5-202ENST00000451497 USTQ9Y2C2 406 aa8.6□□□□□ -1.03
HMGB1P5-202ENST00000451497 ZPR1O75312 459 aa8.59□□□□□ -1.03
HMGB1P5-202ENST00000451497 COPS2P61201 443 aa8.59□□□□□ -1.03
HMGB1P5-202ENST00000451497 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
HMGB1P5-202ENST00000451497 SPRYD7Q5W111 196 aa8.59□□□□□ -1.03
HMGB1P5-202ENST00000451497 ALG2Q9H553 416 aa8.59□□□□□ -1.03
HMGB1P5-202ENST00000451497 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
HMGB1P5-202ENST00000451497 PALM3A6NDB9 673 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P5-202ENST00000451497 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
HMGB1P5-202ENST00000451497 NR6A1Q15406 480 aa8.58□□□□□ -1.04
HMGB1P5-202ENST00000451497 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
HMGB1P5-202ENST00000451497 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
HMGB1P5-202ENST00000451497 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
HMGB1P5-202ENST00000451497 BRD1O95696 1058 aa8.57□□□□□ -1.04
HMGB1P5-202ENST00000451497 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
HMGB1P5-202ENST00000451497 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
HMGB1P5-202ENST00000451497 TERTO14746 1132 aaKnown RBP8.56□□□□□ -1.04
HMGB1P5-202ENST00000451497 MFAP1P55081 439 aaKnown RBP8.56□□□□□ -1.04
HMGB1P5-202ENST00000451497 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGB1P5-202ENST00000451497 KCNA1Q09470 495 aa8.56□□□□□ -1.04
HMGB1P5-202ENST00000451497 RETREG3Q86VR2 466 aa8.56□□□□□ -1.04
HMGB1P5-202ENST00000451497 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
HMGB1P5-202ENST00000451497 GPR37L1O60883 481 aa8.55□□□□□ -1.04
HMGB1P5-202ENST00000451497 Q3C1V9 767 aa8.55□□□□□ -1.04
HMGB1P5-202ENST00000451497 XP32Q5T750 250 aa8.55□□□□□ -1.04
HMGB1P5-202ENST00000451497 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
HMGB1P5-202ENST00000451497 GDF9O60383 454 aa8.54□□□□□ -1.04
HMGB1P5-202ENST00000451497 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
HMGB1P5-202ENST00000451497 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
HMGB1P5-202ENST00000451497 ZNF697Q5TEC3 545 aa8.54□□□□□ -1.04
HMGB1P5-202ENST00000451497 PER1O15534 1290 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P5-202ENST00000451497 SRPK2P78362 688 aaKnown RBP8.51□□□□□ -1.05
HMGB1P5-202ENST00000451497 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
HMGB1P5-202ENST00000451497 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
HMGB1P5-202ENST00000451497 CRIPAKQ8N1N5 446 aa8.51□□□□□ -1.05
HMGB1P5-202ENST00000451497 UCN2Q96RP3 112 aa8.51□□□□□ -1.05
HMGB1P5-202ENST00000451497 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
HMGB1P5-202ENST00000451497 NR1I2O75469 434 aa8.5□□□□□ -1.05
HMGB1P5-202ENST00000451497 ATG7O95352 703 aa8.5□□□□□ -1.05
HMGB1P5-202ENST00000451497 NR1H3Q13133 447 aa8.5□□□□□ -1.05
HMGB1P5-202ENST00000451497 MORN1Q5T089 497 aa8.5□□□□□ -1.05
HMGB1P5-202ENST00000451497 VRTNQ9H8Y1 702 aa8.5□□□□□ -1.05
HMGB1P5-202ENST00000451497 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
HMGB1P5-202ENST00000451497 MAFBQ9Y5Q3 323 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P5-202ENST00000451497 RNF223E7ERA6 249 aa8.49□□□□□ -1.05
HMGB1P5-202ENST00000451497 ATP9BO43861 1147 aa8.49□□□□□ -1.05
HMGB1P5-202ENST00000451497 TBC1D9Q6ZT07 1266 aa8.49□□□□□ -1.05
HMGB1P5-202ENST00000451497 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
HMGB1P5-202ENST00000451497 CARNS1A5YM72 827 aa8.48□□□□□ -1.05
HMGB1P5-202ENST00000451497 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P5-202ENST00000451497 TLL1O43897 1013 aa8.48□□□□□ -1.05
HMGB1P5-202ENST00000451497 LYPD8Q6UX82 237 aa8.48□□□□□ -1.05
HMGB1P5-202ENST00000451497 ZBBXA8MT70 800 aa8.47□□□□□ -1.05
HMGB1P5-202ENST00000451497 AXIN1O15169 862 aa8.47□□□□□ -1.05
HMGB1P5-202ENST00000451497 ADH1BP00325 375 aa8.47□□□□□ -1.05
HMGB1P5-202ENST00000451497 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms