RNA–Protein interactions for RNA: ENST00000449581.1

LINC01428-201, Transcript of long intergenic non-protein coding RNA 1428, humanhuman

TSL 1 (best) BASIC

Gene LINC01428, Length 874 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01428-201ENST00000449581 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
LINC01428-201ENST00000449581 DDX11L8A8MPP1 907 aa16.31■□□□□ 0.2
LINC01428-201ENST00000449581 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
LINC01428-201ENST00000449581 CHMP5Q9NZZ3 219 aa16.31■□□□□ 0.2
LINC01428-201ENST00000449581 MTHFSP49914 203 aa16.29■□□□□ 0.2
LINC01428-201ENST00000449581 ANTXR1Q9H6X2 564 aa16.29■□□□□ 0.2
LINC01428-201ENST00000449581 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
LINC01428-201ENST00000449581 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
LINC01428-201ENST00000449581 FRAT2O75474 233 aaPredicted RBP16.28■□□□□ 0.2
LINC01428-201ENST00000449581 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
LINC01428-201ENST00000449581 PANK1Q8TE04 598 aa16.28■□□□□ 0.2
LINC01428-201ENST00000449581 DLC1Q96QB1 1528 aa16.28■□□□□ 0.2
LINC01428-201ENST00000449581 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.2
LINC01428-201ENST00000449581 KIF20BQ96Q89 1820 aa16.27■□□□□ 0.2
LINC01428-201ENST00000449581 SMC5Q8IY18 1101 aa16.27■□□□□ 0.2
LINC01428-201ENST00000449581 SNX21Q969T3 373 aa16.27■□□□□ 0.2
LINC01428-201ENST00000449581 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
LINC01428-201ENST00000449581 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
LINC01428-201ENST00000449581 CD109Q6YHK3 1445 aa16.26■□□□□ 0.19
LINC01428-201ENST00000449581 DIP2BQ9P265 1576 aa16.26■□□□□ 0.19
LINC01428-201ENST00000449581 PNPLA6Q8IY17 1366 aa16.26■□□□□ 0.19
LINC01428-201ENST00000449581 ATP7BP35670 1465 aa16.25■□□□□ 0.19
LINC01428-201ENST00000449581 SKOR2Q2VWA4 1001 aaPredicted RBP16.25■□□□□ 0.19
LINC01428-201ENST00000449581 ATF7IPQ6VMQ6 1270 aa16.25■□□□□ 0.19
LINC01428-201ENST00000449581 HSCBQ8IWL3 235 aa16.25■□□□□ 0.19
LINC01428-201ENST00000449581 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
LINC01428-201ENST00000449581 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC01428-201ENST00000449581 NCOA3Q9Y6Q9 1424 aa16.23■□□□□ 0.19
LINC01428-201ENST00000449581 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
LINC01428-201ENST00000449581 SMC4Q9NTJ3 1288 aa16.23■□□□□ 0.19
LINC01428-201ENST00000449581 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
LINC01428-201ENST00000449581 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
LINC01428-201ENST00000449581 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
LINC01428-201ENST00000449581 DIP2CQ9Y2E4 1556 aa16.22■□□□□ 0.19
LINC01428-201ENST00000449581 FCHSD2O94868 740 aa16.22■□□□□ 0.19
LINC01428-201ENST00000449581 RBM25P49756 843 aaKnown RBP16.22■□□□□ 0.19
LINC01428-201ENST00000449581 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
LINC01428-201ENST00000449581 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
LINC01428-201ENST00000449581 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
LINC01428-201ENST00000449581 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
LINC01428-201ENST00000449581 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
LINC01428-201ENST00000449581 TMPOP42166 694 aaKnown RBP16.21■□□□□ 0.19
LINC01428-201ENST00000449581 SLC4A3P48751 1232 aa16.21■□□□□ 0.19
LINC01428-201ENST00000449581 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
LINC01428-201ENST00000449581 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
LINC01428-201ENST00000449581 MCM4P33991 863 aa16.2■□□□□ 0.18
LINC01428-201ENST00000449581 MRE11P49959 708 aa16.2■□□□□ 0.18
LINC01428-201ENST00000449581 GBP4Q96PP9 640 aa16.2■□□□□ 0.18
LINC01428-201ENST00000449581 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
LINC01428-201ENST00000449581 PREX1Q8TCU6 1659 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 PTPRMP28827 1452 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 A0A1W2PP64 1363 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 BMP2KLQ5H9B9 411 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 SKAP1Q86WV1 359 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 TMEM131LA2VDJ0 1609 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
LINC01428-201ENST00000449581 FSD2A1L4K1 749 aa16.18■□□□□ 0.18
LINC01428-201ENST00000449581 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
LINC01428-201ENST00000449581 YEATS2Q9ULM3 1422 aa16.18■□□□□ 0.18
LINC01428-201ENST00000449581 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
LINC01428-201ENST00000449581 RLBP1P12271 317 aa16.17■□□□□ 0.18
LINC01428-201ENST00000449581 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
LINC01428-201ENST00000449581 NUCB1Q02818 461 aa16.16■□□□□ 0.18
LINC01428-201ENST00000449581 ZBTB40Q9NUA8 1239 aa16.16■□□□□ 0.18
LINC01428-201ENST00000449581 FAM135BQ49AJ0 1406 aa16.16■□□□□ 0.18
LINC01428-201ENST00000449581 RICTORQ6R327 1708 aa16.16■□□□□ 0.18
LINC01428-201ENST00000449581 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
LINC01428-201ENST00000449581 TRIM27P14373 513 aa16.15■□□□□ 0.18
LINC01428-201ENST00000449581 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
LINC01428-201ENST00000449581 CDK12Q9NYV4 1490 aaPredicted RBP16.15■□□□□ 0.18
LINC01428-201ENST00000449581 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
LINC01428-201ENST00000449581 GOLGA6L22H0YM25 854 aa16.14■□□□□ 0.17
LINC01428-201ENST00000449581 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
LINC01428-201ENST00000449581 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
LINC01428-201ENST00000449581 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
LINC01428-201ENST00000449581 GNAI1P63096 354 aa16.13■□□□□ 0.17
LINC01428-201ENST00000449581 EXOSC9Q06265 439 aaKnown RBP16.13■□□□□ 0.17
LINC01428-201ENST00000449581 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
LINC01428-201ENST00000449581 SEC24BO95487 1268 aa16.12■□□□□ 0.17
LINC01428-201ENST00000449581 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
LINC01428-201ENST00000449581 SLKQ9H2G2 1235 aaPredicted RBP16.12■□□□□ 0.17
LINC01428-201ENST00000449581 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
LINC01428-201ENST00000449581 AGLP35573 1532 aa16.12■□□□□ 0.17
LINC01428-201ENST00000449581 LRRC7Q96NW7 1537 aa16.11■□□□□ 0.17
LINC01428-201ENST00000449581 CLEC17AQ6ZS10 378 aa16.11■□□□□ 0.17
LINC01428-201ENST00000449581 SSH1Q8WYL5 1049 aa16.11■□□□□ 0.17
LINC01428-201ENST00000449581 IFT57Q9NWB7 429 aa16.11■□□□□ 0.17
LINC01428-201ENST00000449581 RRP7AQ9Y3A4 280 aaKnown RBP16.11■□□□□ 0.17
LINC01428-201ENST00000449581 CPSF1Q10570 1443 aaKnown RBP16.11■□□□□ 0.17
LINC01428-201ENST00000449581 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
LINC01428-201ENST00000449581 CD163L1Q9NR16 1453 aa16.1■□□□□ 0.17
LINC01428-201ENST00000449581 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
LINC01428-201ENST00000449581 CHD1LQ86WJ1 897 aa16.1■□□□□ 0.17
LINC01428-201ENST00000449581 ALKQ9UM73 1620 aa16.09■□□□□ 0.17
LINC01428-201ENST00000449581 KNDC1Q76NI1 1749 aa16.09■□□□□ 0.17
LINC01428-201ENST00000449581 CLCN1P35523 988 aa16.09■□□□□ 0.17
LINC01428-201ENST00000449581 RIPK4P57078 832 aa16.09■□□□□ 0.17
LINC01428-201ENST00000449581 POGKQ9P215 609 aa16.09■□□□□ 0.17
LINC01428-201ENST00000449581 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms