RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 RXRBP28702 533 aa25.43■■□□□ 1.66
RFTN1-205ENST00000449415 NUTM2GQ5VZR2 741 aa25.42■■□□□ 1.66
RFTN1-205ENST00000449415 FNBP4Q8N3X1 1017 aaPredicted RBP25.42■■□□□ 1.66
RFTN1-205ENST00000449415 TIMELESSQ9UNS1 1208 aa25.4■■□□□ 1.66
RFTN1-205ENST00000449415 SBNO2Q9Y2G9 1366 aa25.4■■□□□ 1.66
RFTN1-205ENST00000449415 CRYBG1Q9Y4K1 1723 aa25.39■■□□□ 1.65
RFTN1-205ENST00000449415 ST20-MTHFSA0A0A6YYL1 179 aa25.38■■□□□ 1.65
RFTN1-205ENST00000449415 PLCH1Q4KWH8 1693 aa25.36■■□□□ 1.65
RFTN1-205ENST00000449415 BCL9LQ86UU0 1499 aa25.36■■□□□ 1.65
RFTN1-205ENST00000449415 TRPC5Q9UL62 973 aaPredicted RBP25.36■■□□□ 1.65
RFTN1-205ENST00000449415 ATAD2Q6PL18 1390 aa25.35■■□□□ 1.65
RFTN1-205ENST00000449415 RBM6P78332 1123 aaKnown RBP25.35■■□□□ 1.65
RFTN1-205ENST00000449415 ABTB2Q8N961 1025 aa25.35■■□□□ 1.65
RFTN1-205ENST00000449415 PHRF1Q9P1Y6 1649 aaKnown RBP25.34■■□□□ 1.65
RFTN1-205ENST00000449415 AKAP12Q02952 1782 aa25.34■■□□□ 1.65
RFTN1-205ENST00000449415 SLIT2O94813 1529 aa25.34■■□□□ 1.65
RFTN1-205ENST00000449415 ATRNO75882 1429 aa25.33■■□□□ 1.65
RFTN1-205ENST00000449415 USP6P35125 1406 aa25.33■■□□□ 1.65
RFTN1-205ENST00000449415 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.33■■□□□ 1.65
RFTN1-205ENST00000449415 USP47Q96K76 1375 aa25.32■■□□□ 1.64
RFTN1-205ENST00000449415 FAM83GA6ND36 823 aa25.32■■□□□ 1.64
RFTN1-205ENST00000449415 UNC5CLQ8IV45 518 aa25.31■■□□□ 1.64
RFTN1-205ENST00000449415 TESK2Q96S53 571 aa25.31■■□□□ 1.64
RFTN1-205ENST00000449415 NWD2Q9ULI1 1742 aa25.3■■□□□ 1.64
RFTN1-205ENST00000449415 TMC1Q8TDI8 760 aa25.3■■□□□ 1.64
RFTN1-205ENST00000449415 RGS12O14924 1447 aa25.29■■□□□ 1.64
RFTN1-205ENST00000449415 COL14A1Q05707 1796 aaKnown RBP25.28■■□□□ 1.64
RFTN1-205ENST00000449415 CDK12Q9NYV4 1490 aaPredicted RBP25.28■■□□□ 1.64
RFTN1-205ENST00000449415 ZC3H6P61129 1189 aaKnown RBP25.27■■□□□ 1.64
RFTN1-205ENST00000449415 ZNF692Q9BU19 519 aaPredicted RBP25.27■■□□□ 1.64
RFTN1-205ENST00000449415 BRD4O60885 1362 aaPredicted RBP25.27■■□□□ 1.64
RFTN1-205ENST00000449415 NLRP13Q86W25 1043 aa25.26■■□□□ 1.63
RFTN1-205ENST00000449415 PRDM11Q9NQV5 511 aa25.26■■□□□ 1.63
RFTN1-205ENST00000449415 PIK3C2AO00443 1686 aa25.26■■□□□ 1.63
RFTN1-205ENST00000449415 GJD4Q96KN9 370 aaPredicted RBP25.25■■□□□ 1.63
RFTN1-205ENST00000449415 SLC12A5Q9H2X9 1139 aa25.25■■□□□ 1.63
RFTN1-205ENST00000449415 BTG4Q9NY30 223 aa25.25■■□□□ 1.63
RFTN1-205ENST00000449415 KTN1Q86UP2 1357 aaKnown RBP25.25■■□□□ 1.63
RFTN1-205ENST00000449415 KIAA0232Q92628 1395 aa25.25■■□□□ 1.63
RFTN1-205ENST00000449415 CPSF1Q10570 1443 aaKnown RBP25.25■■□□□ 1.63
RFTN1-205ENST00000449415 SSH2Q76I76 1423 aa25.25■■□□□ 1.63
RFTN1-205ENST00000449415 NRKQ7Z2Y5 1582 aa25.25■■□□□ 1.63
RFTN1-205ENST00000449415 MON2Q7Z3U7 1717 aa25.25■■□□□ 1.63
RFTN1-205ENST00000449415 NRAPQ86VF7 1730 aa25.25■■□□□ 1.63
RFTN1-205ENST00000449415 NLRP6P59044 892 aa25.24■■□□□ 1.63
RFTN1-205ENST00000449415 CHRNA2Q15822 529 aa25.24■■□□□ 1.63
RFTN1-205ENST00000449415 CCDC9Q9Y3X0 531 aaKnown RBP25.24■■□□□ 1.63
RFTN1-205ENST00000449415 USP19O94966 1318 aa25.23■■□□□ 1.63
RFTN1-205ENST00000449415 TTC21BQ7Z4L5 1316 aa25.23■■□□□ 1.63
RFTN1-205ENST00000449415 GLI3P10071 1580 aa25.22■■□□□ 1.63
RFTN1-205ENST00000449415 CD163L1Q9NR16 1453 aa25.21■■□□□ 1.63
RFTN1-205ENST00000449415 SLC24A1O60721 1099 aa25.2■■□□□ 1.62
RFTN1-205ENST00000449415 TMF1P82094 1093 aa25.2■■□□□ 1.62
RFTN1-205ENST00000449415 VPS72Q15906 364 aa25.2■■□□□ 1.62
RFTN1-205ENST00000449415 HDGFL2Q7Z4V5 671 aaPredicted RBP25.2■■□□□ 1.62
RFTN1-205ENST00000449415 PUS7Q96PZ0 661 aaKnown RBP25.2■■□□□ 1.62
RFTN1-205ENST00000449415 ZBTB7CA1YPR0 619 aa25.19■■□□□ 1.62
RFTN1-205ENST00000449415 GCP02774 474 aa25.19■■□□□ 1.62
RFTN1-205ENST00000449415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.19■■□□□ 1.62
RFTN1-205ENST00000449415 TTC21AQ8NDW8 1320 aa25.17■■□□□ 1.62
RFTN1-205ENST00000449415 TERF2IPQ9NYB0 399 aa25.16■■□□□ 1.62
RFTN1-205ENST00000449415 SLIT3O75094 1523 aa25.16■■□□□ 1.62
RFTN1-205ENST00000449415 SOX12O15370 315 aa25.15■■□□□ 1.62
RFTN1-205ENST00000449415 STRN4Q9NRL3 753 aa25.15■■□□□ 1.62
RFTN1-205ENST00000449415 A0A1W2PP64 1363 aa25.15■■□□□ 1.62
RFTN1-205ENST00000449415 ZRANB1Q9UGI0 708 aa25.14■■□□□ 1.62
RFTN1-205ENST00000449415 CPDO75976 1380 aa25.13■■□□□ 1.61
RFTN1-205ENST00000449415 BRWD3Q6RI45 1802 aa25.12■■□□□ 1.61
RFTN1-205ENST00000449415 NME9Q86XW9 330 aa25.12■■□□□ 1.61
RFTN1-205ENST00000449415 LMO7Q8WWI1 1683 aa25.11■■□□□ 1.61
RFTN1-205ENST00000449415 NINLQ9Y2I6 1382 aa25.11■■□□□ 1.61
RFTN1-205ENST00000449415 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
RFTN1-205ENST00000449415 CAMTA1Q9Y6Y1 1673 aa25.1■■□□□ 1.61
RFTN1-205ENST00000449415 EVA1CP58658 441 aa25.1■■□□□ 1.61
RFTN1-205ENST00000449415 UPF1Q92900 1129 aaKnown RBP eCLIP25.1■■□□□ 1.61
RFTN1-205ENST00000449415 A0A0G2JS52 829 aa25.09■■□□□ 1.61
RFTN1-205ENST00000449415 MYT1Q01538 1121 aa25.09■■□□□ 1.61
RFTN1-205ENST00000449415 SEPT12Q8IYM1 358 aa25.09■■□□□ 1.61
RFTN1-205ENST00000449415 HSPA5P11021 654 aaKnown RBP25.08■■□□□ 1.61
RFTN1-205ENST00000449415 EIF4G2P78344 907 aaKnown RBP eCLIP25.08■■□□□ 1.61
RFTN1-205ENST00000449415 FAM98CQ17RN3 349 aaKnown RBP25.08■■□□□ 1.61
RFTN1-205ENST00000449415 CDCA8Q53HL2 280 aa25.08■■□□□ 1.61
RFTN1-205ENST00000449415 SPATA31A5Q5VU36 1347 aa25.08■■□□□ 1.6
RFTN1-205ENST00000449415 SPATA31A7Q8IWB4 1347 aa25.08■■□□□ 1.6
RFTN1-205ENST00000449415 KCNH5Q8NCM2 988 aa25.06■■□□□ 1.6
RFTN1-205ENST00000449415 RGPD5Q99666 1765 aa25.05■■□□□ 1.6
RFTN1-205ENST00000449415 USP54Q70EL1 1684 aa25.05■■□□□ 1.6
RFTN1-205ENST00000449415 POLR3GLQ9BT43 218 aa25.05■■□□□ 1.6
RFTN1-205ENST00000449415 USP35Q9P2H5 1018 aa25.05■■□□□ 1.6
RFTN1-205ENST00000449415 USP31Q70CQ4 1352 aa25.05■■□□□ 1.6
RFTN1-205ENST00000449415 ANKRD36BQ8N2N9 1353 aa25.05■■□□□ 1.6
RFTN1-205ENST00000449415 MYOM1P52179 1685 aa25.04■■□□□ 1.6
RFTN1-205ENST00000449415 COL18A1P39060 1754 aa25.04■■□□□ 1.6
RFTN1-205ENST00000449415 LARP1Q6PKG0 1096 aaKnown RBP25.04■■□□□ 1.6
RFTN1-205ENST00000449415 NFAT5O94916 1531 aa25.03■■□□□ 1.6
RFTN1-205ENST00000449415 ONECUT3O60422 494 aaPredicted RBP25.03■■□□□ 1.6
RFTN1-205ENST00000449415 SPATA31A1Q5TZJ5 1347 aa25.03■■□□□ 1.6
RFTN1-205ENST00000449415 ARHGEF25Q86VW2 580 aa25.02■■□□□ 1.6
RFTN1-205ENST00000449415 AATKQ6ZMQ8 1374 aa25.02■■□□□ 1.6
RFTN1-205ENST00000449415 COL5A2P05997 1499 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms