RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
LINC00954-202ENST00000449086 EVC2Q86UK5 1308 aa10.63□□□□□ -0.71
LINC00954-202ENST00000449086 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
LINC00954-202ENST00000449086 WASLO00401 505 aaPredicted RBP10.62□□□□□ -0.71
LINC00954-202ENST00000449086 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
LINC00954-202ENST00000449086 TOPAZ1Q8N9V7 1692 aa10.62□□□□□ -0.71
LINC00954-202ENST00000449086 MST1RQ04912 1400 aa10.62□□□□□ -0.71
LINC00954-202ENST00000449086 ATF3P18847 181 aa10.62□□□□□ -0.71
LINC00954-202ENST00000449086 KIF1AQ12756 1690 aa10.62□□□□□ -0.71
LINC00954-202ENST00000449086 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
LINC00954-202ENST00000449086 PNISRQ8TF01 805 aaKnown RBP10.62□□□□□ -0.71
LINC00954-202ENST00000449086 DDRGK1Q96HY6 314 aa10.61□□□□□ -0.71
LINC00954-202ENST00000449086 MINK1Q8N4C8 1332 aaPredicted RBP10.61□□□□□ -0.71
LINC00954-202ENST00000449086 ATAD2Q6PL18 1390 aa10.61□□□□□ -0.71
LINC00954-202ENST00000449086 NINLQ9Y2I6 1382 aa10.61□□□□□ -0.71
LINC00954-202ENST00000449086 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
LINC00954-202ENST00000449086 TOM1O60784 492 aa10.6□□□□□ -0.71
LINC00954-202ENST00000449086 TMF1P82094 1093 aa10.6□□□□□ -0.71
LINC00954-202ENST00000449086 ATP7BP35670 1465 aa10.6□□□□□ -0.71
LINC00954-202ENST00000449086 C1orf167Q5SNV9 1468 aa10.6□□□□□ -0.71
LINC00954-202ENST00000449086 ARXQ96QS3 562 aa10.59□□□□□ -0.71
LINC00954-202ENST00000449086 MAPK8IP2Q13387 824 aaPredicted RBP10.59□□□□□ -0.71
LINC00954-202ENST00000449086 SAFB2Q14151 953 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00954-202ENST00000449086 CDK19Q9BWU1 502 aa10.58□□□□□ -0.72
LINC00954-202ENST00000449086 MS4A1P11836 297 aa10.57□□□□□ -0.72
LINC00954-202ENST00000449086 RBM33Q96EV2 1170 aaKnown RBP10.57□□□□□ -0.72
LINC00954-202ENST00000449086 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
LINC00954-202ENST00000449086 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
LINC00954-202ENST00000449086 FRAT2O75474 233 aaPredicted RBP10.57□□□□□ -0.72
LINC00954-202ENST00000449086 AHDC1Q5TGY3 1603 aaPredicted RBP10.57□□□□□ -0.72
LINC00954-202ENST00000449086 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
LINC00954-202ENST00000449086 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
LINC00954-202ENST00000449086 NHSL1Q5SYE7 1610 aa10.56□□□□□ -0.72
LINC00954-202ENST00000449086 ROBO1Q9Y6N7 1651 aa10.56□□□□□ -0.72
LINC00954-202ENST00000449086 SRPK2P78362 688 aaKnown RBP10.56□□□□□ -0.72
LINC00954-202ENST00000449086 NUDT16Q96DE0 195 aaKnown RBP10.56□□□□□ -0.72
LINC00954-202ENST00000449086 CCDC61Q9Y6R9 512 aa10.56□□□□□ -0.72
LINC00954-202ENST00000449086 PLEKHG3A1L390 1219 aa10.55□□□□□ -0.72
LINC00954-202ENST00000449086 CRBNQ96SW2 442 aa10.55□□□□□ -0.72
LINC00954-202ENST00000449086 PRR36Q9H6K5 1346 aa10.55□□□□□ -0.72
LINC00954-202ENST00000449086 RGS3P49796 1198 aa10.55□□□□□ -0.72
LINC00954-202ENST00000449086 POLR3AO14802 1390 aaPredicted RBP10.55□□□□□ -0.72
LINC00954-202ENST00000449086 UBAP1LF5GYI3 381 aa10.54□□□□□ -0.72
LINC00954-202ENST00000449086 RGPD8O14715 1765 aaPredicted RBP10.54□□□□□ -0.72
LINC00954-202ENST00000449086 MYOM1P52179 1685 aa10.54□□□□□ -0.72
LINC00954-202ENST00000449086 PPIP5K1Q6PFW1 1433 aa10.54□□□□□ -0.72
LINC00954-202ENST00000449086 AKAP12Q02952 1782 aa10.53□□□□□ -0.72
LINC00954-202ENST00000449086 CABP2Q9NPB3 220 aa10.53□□□□□ -0.72
LINC00954-202ENST00000449086 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
LINC00954-202ENST00000449086 PHF8Q9UPP1 1060 aa10.53□□□□□ -0.72
LINC00954-202ENST00000449086 CPSF1Q10570 1443 aaKnown RBP10.52□□□□□ -0.73
LINC00954-202ENST00000449086 MON2Q7Z3U7 1717 aa10.52□□□□□ -0.73
LINC00954-202ENST00000449086 NPHP3Q7Z494 1330 aa10.52□□□□□ -0.73
LINC00954-202ENST00000449086 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
LINC00954-202ENST00000449086 FBXO41Q8TF61 875 aa10.51□□□□□ -0.73
LINC00954-202ENST00000449086 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
LINC00954-202ENST00000449086 RSPH6AQ9H0K4 717 aa10.51□□□□□ -0.73
LINC00954-202ENST00000449086 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 PXDNQ92626 1479 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 NRKQ7Z2Y5 1582 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 SBNO1A3KN83 1393 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 TRPM3Q9HCF6 1732 aaPredicted RBP10.5□□□□□ -0.73
LINC00954-202ENST00000449086 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 ORAI2Q96SN7 254 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 TERF2IPQ9NYB0 399 aa10.5□□□□□ -0.73
LINC00954-202ENST00000449086 MYBBP1AQ9BQG0 1328 aaKnown RBP10.5□□□□□ -0.73
LINC00954-202ENST00000449086 PHLPP1O60346 1717 aa10.49□□□□□ -0.73
LINC00954-202ENST00000449086 COL16A1Q07092 1604 aaPredicted RBP10.49□□□□□ -0.73
LINC00954-202ENST00000449086 SOS2Q07890 1332 aaPredicted RBP10.49□□□□□ -0.73
LINC00954-202ENST00000449086 PSME1Q06323 249 aa10.49□□□□□ -0.73
LINC00954-202ENST00000449086 USP6P35125 1406 aa10.48□□□□□ -0.73
LINC00954-202ENST00000449086 SSH2Q76I76 1423 aa10.48□□□□□ -0.73
LINC00954-202ENST00000449086 CC2D1BQ5T0F9 858 aaKnown RBP10.48□□□□□ -0.73
LINC00954-202ENST00000449086 HDGFL2Q7Z4V5 671 aaPredicted RBP10.48□□□□□ -0.73
LINC00954-202ENST00000449086 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
LINC00954-202ENST00000449086 USP54Q70EL1 1684 aa10.48□□□□□ -0.73
LINC00954-202ENST00000449086 ACEP12821 1306 aa10.48□□□□□ -0.73
LINC00954-202ENST00000449086 EDC4Q6P2E9 1401 aaKnown RBP10.48□□□□□ -0.73
LINC00954-202ENST00000449086 NGDNQ8NEJ9 315 aaKnown RBP10.47□□□□□ -0.73
LINC00954-202ENST00000449086 SLKQ9H2G2 1235 aaPredicted RBP10.47□□□□□ -0.73
LINC00954-202ENST00000449086 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
LINC00954-202ENST00000449086 FAM43AQ8N2R8 423 aa10.47□□□□□ -0.73
LINC00954-202ENST00000449086 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
LINC00954-202ENST00000449086 TTC21AQ8NDW8 1320 aa10.47□□□□□ -0.73
LINC00954-202ENST00000449086 COL22A1Q8NFW1 1626 aaPredicted RBP10.46□□□□□ -0.73
LINC00954-202ENST00000449086 MED1Q15648 1581 aaPredicted RBP10.46□□□□□ -0.73
LINC00954-202ENST00000449086 A0A1W2PP64 1363 aa10.46□□□□□ -0.73
LINC00954-202ENST00000449086 SHPRHQ149N8 1683 aa10.46□□□□□ -0.73
LINC00954-202ENST00000449086 FAM161AQ3B820 660 aa10.46□□□□□ -0.73
LINC00954-202ENST00000449086 KTN1Q86UP2 1357 aaKnown RBP10.46□□□□□ -0.74
LINC00954-202ENST00000449086 PIP4K2BP78356 416 aa10.46□□□□□ -0.74
LINC00954-202ENST00000449086 RALBP1Q15311 655 aa10.46□□□□□ -0.74
LINC00954-202ENST00000449086 PKNOX2Q96KN3 472 aa10.46□□□□□ -0.74
LINC00954-202ENST00000449086 TNS3Q68CZ2 1445 aa10.46□□□□□ -0.74
LINC00954-202ENST00000449086 PDE3BQ13370 1112 aa10.45□□□□□ -0.74
LINC00954-202ENST00000449086 NLRP13Q86W25 1043 aa10.45□□□□□ -0.74
LINC00954-202ENST00000449086 PMFBP1Q8TBY8 1022 aa10.45□□□□□ -0.74
LINC00954-202ENST00000449086 NAP1L5Q96NT1 182 aaPredicted RBP10.45□□□□□ -0.74
LINC00954-202ENST00000449086 SLC12A5Q9H2X9 1139 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms