RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NRAPQ86VF7 1730 aa26.51■■□□□ 1.83
CHCHD3-203ENST00000448878 PRR36Q9H6K5 1346 aa26.51■■□□□ 1.83
CHCHD3-203ENST00000448878 WASLO00401 505 aaPredicted RBP26.51■■□□□ 1.83
CHCHD3-203ENST00000448878 DCAF11Q8TEB1 546 aa26.51■■□□□ 1.83
CHCHD3-203ENST00000448878 TRPM3Q9HCF6 1732 aaPredicted RBP26.51■■□□□ 1.83
CHCHD3-203ENST00000448878 ADGRB2O60241 1585 aa26.5■■□□□ 1.83
CHCHD3-203ENST00000448878 SPATA31A5Q5VU36 1347 aa26.49■■□□□ 1.83
CHCHD3-203ENST00000448878 SPATA31A7Q8IWB4 1347 aa26.49■■□□□ 1.83
CHCHD3-203ENST00000448878 LRP5O75197 1615 aa26.48■■□□□ 1.83
CHCHD3-203ENST00000448878 R3HDM1Q15032 1099 aaKnown RBP26.48■■□□□ 1.83
CHCHD3-203ENST00000448878 ALS2Q96Q42 1657 aa26.47■■□□□ 1.83
CHCHD3-203ENST00000448878 STRN4Q9NRL3 753 aa26.47■■□□□ 1.83
CHCHD3-203ENST00000448878 TULP4Q9NRJ4 1543 aa26.46■■□□□ 1.83
CHCHD3-203ENST00000448878 ADGRB1O14514 1584 aa26.46■■□□□ 1.83
CHCHD3-203ENST00000448878 CHRNA2Q15822 529 aa26.45■■□□□ 1.82
CHCHD3-203ENST00000448878 RGPD1P0DJD0 1748 aa26.44■■□□□ 1.82
CHCHD3-203ENST00000448878 EZH2Q15910 746 aaKnown RBP26.43■■□□□ 1.82
CHCHD3-203ENST00000448878 NUTM2GQ5VZR2 741 aa26.43■■□□□ 1.82
CHCHD3-203ENST00000448878 USP35Q9P2H5 1018 aa26.43■■□□□ 1.82
CHCHD3-203ENST00000448878 RAB3GAP2Q9H2M9 1393 aa26.43■■□□□ 1.82
CHCHD3-203ENST00000448878 ZC3H6P61129 1189 aaKnown RBP26.42■■□□□ 1.82
CHCHD3-203ENST00000448878 TRIM37O94972 964 aa26.41■■□□□ 1.82
CHCHD3-203ENST00000448878 NUDT16Q96DE0 195 aaKnown RBP26.41■■□□□ 1.82
CHCHD3-203ENST00000448878 KIAA0232Q92628 1395 aa26.41■■□□□ 1.82
CHCHD3-203ENST00000448878 EVA1CP58658 441 aa26.4■■□□□ 1.82
CHCHD3-203ENST00000448878 SPATA31A1Q5TZJ5 1347 aa26.39■■□□□ 1.82
CHCHD3-203ENST00000448878 FAM196AQ6ZSG2 479 aa26.38■■□□□ 1.81
CHCHD3-203ENST00000448878 APBA3O96018 575 aa26.37■■□□□ 1.81
CHCHD3-203ENST00000448878 THSD7AQ9UPZ6 1657 aa26.35■■□□□ 1.81
CHCHD3-203ENST00000448878 PDE3BQ13370 1112 aa26.35■■□□□ 1.81
CHCHD3-203ENST00000448878 CDK19Q9BWU1 502 aa26.35■■□□□ 1.81
CHCHD3-203ENST00000448878 CRYBG1Q9Y4K1 1723 aa26.34■■□□□ 1.81
CHCHD3-203ENST00000448878 STAC3Q96MF2 364 aa26.34■■□□□ 1.81
CHCHD3-203ENST00000448878 ITSN1Q15811 1721 aa26.32■■□□□ 1.8
CHCHD3-203ENST00000448878 TNS1Q9HBL0 1735 aaKnown RBP26.32■■□□□ 1.8
CHCHD3-203ENST00000448878 CAMKK2Q96RR4 588 aa26.32■■□□□ 1.8
CHCHD3-203ENST00000448878 DISP2A7MBM2 1401 aa26.31■■□□□ 1.8
CHCHD3-203ENST00000448878 ACEP12821 1306 aa26.31■■□□□ 1.8
CHCHD3-203ENST00000448878 ATP7BP35670 1465 aa26.3■■□□□ 1.8
CHCHD3-203ENST00000448878 ABTB2Q8N961 1025 aa26.3■■□□□ 1.8
CHCHD3-203ENST00000448878 NBPF8Q3BBV2 869 aa26.29■■□□□ 1.8
CHCHD3-203ENST00000448878 PHRF1Q9P1Y6 1649 aaKnown RBP26.28■■□□□ 1.8
CHCHD3-203ENST00000448878 ARHGEF28Q8N1W1 1705 aaKnown RBP26.28■■□□□ 1.8
CHCHD3-203ENST00000448878 CCDC61Q9Y6R9 512 aa26.27■■□□□ 1.8
CHCHD3-203ENST00000448878 LARP1Q6PKG0 1096 aaKnown RBP26.26■■□□□ 1.79
CHCHD3-203ENST00000448878 NBPF14Q5TI25 921 aa26.25■■□□□ 1.79
CHCHD3-203ENST00000448878 BARGINQ6ZT62 677 aa26.25■■□□□ 1.79
CHCHD3-203ENST00000448878 SSH2Q76I76 1423 aa26.24■■□□□ 1.79
CHCHD3-203ENST00000448878 ZBTB7CA1YPR0 619 aa26.24■■□□□ 1.79
CHCHD3-203ENST00000448878 TCP11L2Q8N4U5 519 aa26.24■■□□□ 1.79
CHCHD3-203ENST00000448878 POLR3AO14802 1390 aaPredicted RBP26.21■■□□□ 1.79
CHCHD3-203ENST00000448878 PARD3Q8TEW0 1356 aa26.21■■□□□ 1.79
CHCHD3-203ENST00000448878 SRPK2P78362 688 aaKnown RBP26.21■■□□□ 1.79
CHCHD3-203ENST00000448878 PLEKHG3A1L390 1219 aa26.2■■□□□ 1.78
CHCHD3-203ENST00000448878 NLRP13Q86W25 1043 aa26.2■■□□□ 1.78
CHCHD3-203ENST00000448878 CAMTA1Q9Y6Y1 1673 aa26.19■■□□□ 1.78
CHCHD3-203ENST00000448878 PPP1R1BQ9UD71 204 aaPredicted RBP26.18■■□□□ 1.78
CHCHD3-203ENST00000448878 GCP02774 474 aa26.17■■□□□ 1.78
CHCHD3-203ENST00000448878 THRAP3Q9Y2W1 955 aaKnown RBP26.17■■□□□ 1.78
CHCHD3-203ENST00000448878 NRKQ7Z2Y5 1582 aa26.16■■□□□ 1.78
CHCHD3-203ENST00000448878 TOPAZ1Q8N9V7 1692 aa26.15■■□□□ 1.78
CHCHD3-203ENST00000448878 NBPF1Q3BBV0 1214 aa26.14■■□□□ 1.78
CHCHD3-203ENST00000448878 CABP2Q9NPB3 220 aa26.14■■□□□ 1.78
CHCHD3-203ENST00000448878 CPDO75976 1380 aa26.14■■□□□ 1.78
CHCHD3-203ENST00000448878 PPIP5K1Q6PFW1 1433 aa26.13■■□□□ 1.77
CHCHD3-203ENST00000448878 USP19O94966 1318 aa26.13■■□□□ 1.77
CHCHD3-203ENST00000448878 YY1P25490 414 aa26.12■■□□□ 1.77
CHCHD3-203ENST00000448878 DCAF8L1A6NGE4 600 aa26.11■■□□□ 1.77
CHCHD3-203ENST00000448878 SPON1Q9HCB6 807 aa26.11■■□□□ 1.77
CHCHD3-203ENST00000448878 RREB1Q92766 1687 aa26.11■■□□□ 1.77
CHCHD3-203ENST00000448878 NUP188Q5SRE5 1749 aa26.11■■□□□ 1.77
CHCHD3-203ENST00000448878 NLRP6P59044 892 aa26.1■■□□□ 1.77
CHCHD3-203ENST00000448878 LMO7Q8WWI1 1683 aa26.09■■□□□ 1.77
CHCHD3-203ENST00000448878 CENPJQ9HC77 1338 aaPredicted RBP26.09■■□□□ 1.77
CHCHD3-203ENST00000448878 C11orf95C9JLR9 678 aaPredicted RBP26.08■■□□□ 1.77
CHCHD3-203ENST00000448878 KCNQ2O43526 872 aa26.08■■□□□ 1.77
CHCHD3-203ENST00000448878 COL5A2P05997 1499 aaPredicted RBP26.07■■□□□ 1.76
CHCHD3-203ENST00000448878 TOM1L2Q6ZVM7 507 aa26.07■■□□□ 1.76
CHCHD3-203ENST00000448878 CABP1Q9NZU7 370 aa26.07■■□□□ 1.76
CHCHD3-203ENST00000448878 CRB1P82279 1406 aa26.06■■□□□ 1.76
CHCHD3-203ENST00000448878 DDB1Q16531 1140 aa26.06■■□□□ 1.76
CHCHD3-203ENST00000448878 KIAA1210Q9ULL0 1709 aa26.04■■□□□ 1.76
CHCHD3-203ENST00000448878 OVOS2A0A0G2JMS6 1433 aa26.04■■□□□ 1.76
CHCHD3-203ENST00000448878 OVOS2A0A0J9YW53 1432 aa26.04■■□□□ 1.76
CHCHD3-203ENST00000448878 OVOS2Q6IE36 1432 aa26.04■■□□□ 1.76
CHCHD3-203ENST00000448878 PARP4Q9UKK3 1724 aaKnown RBP26.03■■□□□ 1.76
CHCHD3-203ENST00000448878 BRD4O60885 1362 aaPredicted RBP26■■□□□ 1.75
CHCHD3-203ENST00000448878 BCL11BQ9C0K0 894 aaPredicted RBP26■■□□□ 1.75
CHCHD3-203ENST00000448878 AATKQ6ZMQ8 1374 aa25.99■■□□□ 1.75
CHCHD3-203ENST00000448878 PLSCR1O15162 318 aa25.99■■□□□ 1.75
CHCHD3-203ENST00000448878 SOX12O15370 315 aa25.99■■□□□ 1.75
CHCHD3-203ENST00000448878 USP6P35125 1406 aa25.98■■□□□ 1.75
CHCHD3-203ENST00000448878 CSB-PGBD3P0DP91 1061 aa25.98■■□□□ 1.75
CHCHD3-203ENST00000448878 PTF1AQ7RTS3 328 aa25.97■■□□□ 1.75
CHCHD3-203ENST00000448878 AXIN2Q9Y2T1 843 aa25.96■■□□□ 1.75
CHCHD3-203ENST00000448878 QRICH2Q9H0J4 1663 aa25.96■■□□□ 1.75
CHCHD3-203ENST00000448878 ANO8Q9HCE9 1232 aaPredicted RBP25.95■■□□□ 1.74
CHCHD3-203ENST00000448878 WDR17Q8IZU2 1322 aa25.94■■□□□ 1.74
CHCHD3-203ENST00000448878 LRRC37A3O60309 1634 aa25.94■■□□□ 1.74
CHCHD3-203ENST00000448878 NINLQ9Y2I6 1382 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms