RNA–Protein interactions for RNA: ENST00000448696.4

IFNE-201, Transcript of interferon epsilon, humanhuman

APPRIS P1 BASIC

Gene IFNE, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNE-201ENST00000448696 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
IFNE-201ENST00000448696 SPDYE16A6NNV3 312 aaPredicted RBP9.28□□□□□ -0.92
IFNE-201ENST00000448696 TTLL12Q14166 644 aaPredicted RBP9.28□□□□□ -0.92
IFNE-201ENST00000448696 ABCA8O94911 1581 aa9.28□□□□□ -0.92
IFNE-201ENST00000448696 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
IFNE-201ENST00000448696 PATL2C9JE40 543 aaKnown RBP9.27□□□□□ -0.93
IFNE-201ENST00000448696 GGCXP38435 758 aa9.26□□□□□ -0.93
IFNE-201ENST00000448696 APLP1P51693 650 aa9.26□□□□□ -0.93
IFNE-201ENST00000448696 PLB1Q6P1J6 1458 aa9.26□□□□□ -0.93
IFNE-201ENST00000448696 EPRSP07814 1512 aaKnown RBP9.25□□□□□ -0.93
IFNE-201ENST00000448696 EHBP1L1Q8N3D4 1523 aa9.25□□□□□ -0.93
IFNE-201ENST00000448696 NUP153P49790 1475 aaKnown RBP9.25□□□□□ -0.93
IFNE-201ENST00000448696 PTPRGP23470 1445 aa9.25□□□□□ -0.93
IFNE-201ENST00000448696 PPP1R15AO75807 674 aaPredicted RBP9.25□□□□□ -0.93
IFNE-201ENST00000448696 SH3D19Q5HYK7 790 aa9.25□□□□□ -0.93
IFNE-201ENST00000448696 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
IFNE-201ENST00000448696 NKX2-3Q8TAU0 364 aa9.25□□□□□ -0.93
IFNE-201ENST00000448696 PCGF6Q9BYE7 350 aa9.25□□□□□ -0.93
IFNE-201ENST00000448696 USP35Q9P2H5 1018 aa9.25□□□□□ -0.93
IFNE-201ENST00000448696 CDK13Q14004 1512 aaKnown RBP9.24□□□□□ -0.93
IFNE-201ENST00000448696 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
IFNE-201ENST00000448696 MS4A1P11836 297 aa9.24□□□□□ -0.93
IFNE-201ENST00000448696 PDE4CQ08493 712 aa9.24□□□□□ -0.93
IFNE-201ENST00000448696 ATP1B4Q9UN42 357 aaPredicted RBP9.24□□□□□ -0.93
IFNE-201ENST00000448696 ABCC2Q92887 1545 aa9.24□□□□□ -0.93
IFNE-201ENST00000448696 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
IFNE-201ENST00000448696 PRIM1P49642 420 aaKnown RBP9.23□□□□□ -0.93
IFNE-201ENST00000448696 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
IFNE-201ENST00000448696 COPS2P61201 443 aa9.22□□□□□ -0.93
IFNE-201ENST00000448696 COG6Q9Y2V7 657 aa9.22□□□□□ -0.93
IFNE-201ENST00000448696 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
IFNE-201ENST00000448696 UACAQ9BZF9 1416 aa9.22□□□□□ -0.93
IFNE-201ENST00000448696 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.93
IFNE-201ENST00000448696 ARHGEF11O15085 1522 aa9.21□□□□□ -0.93
IFNE-201ENST00000448696 KCNA1Q09470 495 aa9.21□□□□□ -0.94
IFNE-201ENST00000448696 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
IFNE-201ENST00000448696 AMOTL2Q9Y2J4 779 aa9.21□□□□□ -0.94
IFNE-201ENST00000448696 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
IFNE-201ENST00000448696 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.94
IFNE-201ENST00000448696 MAGI3Q5TCQ9 1506 aa9.2□□□□□ -0.94
IFNE-201ENST00000448696 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
IFNE-201ENST00000448696 GNPATO15228 680 aa9.2□□□□□ -0.94
IFNE-201ENST00000448696 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
IFNE-201ENST00000448696 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
IFNE-201ENST00000448696 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
IFNE-201ENST00000448696 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
IFNE-201ENST00000448696 MTUS2Q5JR59 1369 aa9.19□□□□□ -0.94
IFNE-201ENST00000448696 ACIN1Q9UKV3 1341 aaKnown RBP9.19□□□□□ -0.94
IFNE-201ENST00000448696 ZCCHC11Q5TAX3 1644 aaKnown RBP9.19□□□□□ -0.94
IFNE-201ENST00000448696 ADCY10Q96PN6 1610 aa9.19□□□□□ -0.94
IFNE-201ENST00000448696 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
IFNE-201ENST00000448696 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
IFNE-201ENST00000448696 SWT1Q5T5J6 900 aaKnown RBP9.18□□□□□ -0.94
IFNE-201ENST00000448696 KANK4Q5T7N3 995 aaPredicted RBP9.18□□□□□ -0.94
IFNE-201ENST00000448696 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
IFNE-201ENST00000448696 SPDYE5A6NIY4 337 aa9.17□□□□□ -0.94
IFNE-201ENST00000448696 SLC4A3P48751 1232 aa9.17□□□□□ -0.94
IFNE-201ENST00000448696 KIF14Q15058 1648 aa9.17□□□□□ -0.94
IFNE-201ENST00000448696 BRD1O95696 1058 aa9.16□□□□□ -0.94
IFNE-201ENST00000448696 ATP10BO94823 1461 aa9.16□□□□□ -0.94
IFNE-201ENST00000448696 KDM5BQ9UGL1 1544 aa9.16□□□□□ -0.94
IFNE-201ENST00000448696 ZPR1O75312 459 aa9.15□□□□□ -0.94
IFNE-201ENST00000448696 OSBPP22059 807 aa9.15□□□□□ -0.94
IFNE-201ENST00000448696 FECHP22830 423 aa9.15□□□□□ -0.94
IFNE-201ENST00000448696 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
IFNE-201ENST00000448696 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
IFNE-201ENST00000448696 NCOA2Q15596 1464 aa9.15□□□□□ -0.94
IFNE-201ENST00000448696 ITSN2Q9NZM3 1697 aa9.15□□□□□ -0.94
IFNE-201ENST00000448696 TROQ12816 1431 aaPredicted RBP9.15□□□□□ -0.94
IFNE-201ENST00000448696 HIC1Q14526 733 aa9.15□□□□□ -0.95
IFNE-201ENST00000448696 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.95
IFNE-201ENST00000448696 REPIN1Q9BWE0 567 aaKnown RBP9.15□□□□□ -0.95
IFNE-201ENST00000448696 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
IFNE-201ENST00000448696 SLC19A1P41440 591 aa9.13□□□□□ -0.95
IFNE-201ENST00000448696 PKDCCQ504Y2 493 aa9.13□□□□□ -0.95
IFNE-201ENST00000448696 PRR14Q9BWN1 585 aa9.13□□□□□ -0.95
IFNE-201ENST00000448696 PCDHB3Q9Y5E6 796 aa9.13□□□□□ -0.95
IFNE-201ENST00000448696 TTC13Q8NBP0 860 aa9.12□□□□□ -0.95
IFNE-201ENST00000448696 RRBP1Q9P2E9 1410 aaKnown RBP9.12□□□□□ -0.95
IFNE-201ENST00000448696 PHLDB1Q86UU1 1377 aa9.11□□□□□ -0.95
IFNE-201ENST00000448696 FCHSD2O94868 740 aa9.11□□□□□ -0.95
IFNE-201ENST00000448696 MYOM3Q5VTT5 1437 aa9.11□□□□□ -0.95
IFNE-201ENST00000448696 TRIM67Q6ZTA4 783 aa9.11□□□□□ -0.95
IFNE-201ENST00000448696 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
IFNE-201ENST00000448696 CHMP4AQ9BY43 222 aa9.11□□□□□ -0.95
IFNE-201ENST00000448696 RNF223E7ERA6 249 aa9.1□□□□□ -0.95
IFNE-201ENST00000448696 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
IFNE-201ENST00000448696 USTQ9Y2C2 406 aa9.1□□□□□ -0.95
IFNE-201ENST00000448696 CDC42BPAQ5VT25 1732 aa9.1□□□□□ -0.95
IFNE-201ENST00000448696 PTPN23Q9H3S7 1636 aa9.1□□□□□ -0.95
IFNE-201ENST00000448696 PLEKHD1A6NEE1 506 aa9.09□□□□□ -0.95
IFNE-201ENST00000448696 MYO5CQ9NQX4 1742 aa9.09□□□□□ -0.95
IFNE-201ENST00000448696 PREX2Q70Z35 1606 aa9.09□□□□□ -0.95
IFNE-201ENST00000448696 FGD6Q6ZV73 1430 aa9.09□□□□□ -0.95
IFNE-201ENST00000448696 WDR7Q9Y4E6 1490 aa9.09□□□□□ -0.95
IFNE-201ENST00000448696 ZEB1P37275 1124 aaPredicted RBP9.08□□□□□ -0.96
IFNE-201ENST00000448696 BLOC1S3Q6QNY0 202 aa9.08□□□□□ -0.96
IFNE-201ENST00000448696 NPDC1Q9NQX5 325 aaPredicted RBP9.08□□□□□ -0.96
IFNE-201ENST00000448696 TTC37Q6PGP7 1564 aa9.08□□□□□ -0.96
IFNE-201ENST00000448696 CCNB3Q8WWL7 1395 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms