RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 MRS2Q9HD23 443 aa9.4□□□□□ -0.9
RFC4-209ENST00000448497 TRPC6Q9Y210 931 aa9.4□□□□□ -0.9
RFC4-209ENST00000448497 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
RFC4-209ENST00000448497 TTLL13PA6NNM8 815 aa9.39□□□□□ -0.91
RFC4-209ENST00000448497 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
RFC4-209ENST00000448497 TMEM132EQ6IEE7 984 aa9.39□□□□□ -0.91
RFC4-209ENST00000448497 NLRP13Q86W25 1043 aa9.39□□□□□ -0.91
RFC4-209ENST00000448497 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
RFC4-209ENST00000448497 TRAK1Q9UPV9 953 aa9.39□□□□□ -0.91
RFC4-209ENST00000448497 CPS1P31327 1500 aa9.39□□□□□ -0.91
RFC4-209ENST00000448497 MED14O60244 1454 aa9.39□□□□□ -0.91
RFC4-209ENST00000448497 DIP2AQ14689 1571 aa9.38□□□□□ -0.91
RFC4-209ENST00000448497 EVC2Q86UK5 1308 aa9.38□□□□□ -0.91
RFC4-209ENST00000448497 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
RFC4-209ENST00000448497 DCBLD2Q96PD2 775 aa9.38□□□□□ -0.91
RFC4-209ENST00000448497 CABP2Q9NPB3 220 aa9.38□□□□□ -0.91
RFC4-209ENST00000448497 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
RFC4-209ENST00000448497 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
RFC4-209ENST00000448497 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
RFC4-209ENST00000448497 RIMS1Q86UR5 1692 aaKnown RBP9.37□□□□□ -0.91
RFC4-209ENST00000448497 PNISRQ8TF01 805 aaKnown RBP9.37□□□□□ -0.91
RFC4-209ENST00000448497 SOX12O15370 315 aa9.36□□□□□ -0.91
RFC4-209ENST00000448497 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
RFC4-209ENST00000448497 NUTM2DQ5VT03 806 aaPredicted RBP9.36□□□□□ -0.91
RFC4-209ENST00000448497 ANKRD26Q9UPS8 1709 aa9.36□□□□□ -0.91
RFC4-209ENST00000448497 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
RFC4-209ENST00000448497 ZBED9Q6R2W3 1325 aa9.35□□□□□ -0.91
RFC4-209ENST00000448497 ADGRB2O60241 1585 aa9.35□□□□□ -0.91
RFC4-209ENST00000448497 ADAMTS13Q76LX8 1427 aa9.35□□□□□ -0.91
RFC4-209ENST00000448497 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
RFC4-209ENST00000448497 TMC1Q8TDI8 760 aa9.35□□□□□ -0.91
RFC4-209ENST00000448497 CEP170BQ9Y4F5 1589 aaPredicted RBP9.35□□□□□ -0.91
RFC4-209ENST00000448497 ATMINO43313 823 aaPredicted RBP9.34□□□□□ -0.91
RFC4-209ENST00000448497 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
RFC4-209ENST00000448497 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
RFC4-209ENST00000448497 NSD2O96028 1365 aa9.34□□□□□ -0.91
RFC4-209ENST00000448497 ANKRD36BQ8N2N9 1353 aa9.34□□□□□ -0.91
RFC4-209ENST00000448497 HNRNPUQ00839 825 aaKnown RBP eCLIP9.33□□□□□ -0.92
RFC4-209ENST00000448497 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
RFC4-209ENST00000448497 EFCAB3Q8N7B9 438 aa9.33□□□□□ -0.92
RFC4-209ENST00000448497 TRIM35Q9UPQ4 493 aa9.33□□□□□ -0.92
RFC4-209ENST00000448497 THEMISQ8N1K5 641 aaPredicted RBP9.32□□□□□ -0.92
RFC4-209ENST00000448497 PRAM1Q96QH2 718 aa9.32□□□□□ -0.92
RFC4-209ENST00000448497 CARD14Q9BXL6 1004 aa9.32□□□□□ -0.92
RFC4-209ENST00000448497 METP08581 1390 aa9.32□□□□□ -0.92
RFC4-209ENST00000448497 XRN1Q8IZH2 1706 aaKnown RBP9.31□□□□□ -0.92
RFC4-209ENST00000448497 CEBPAP49715 358 aaPredicted RBP9.31□□□□□ -0.92
RFC4-209ENST00000448497 ATN1P54259 1190 aaPredicted RBP9.31□□□□□ -0.92
RFC4-209ENST00000448497 NLRP6P59044 892 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 IER5LQ5T953 404 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 PAXIP1Q6ZW49 1069 aaPredicted RBP9.31□□□□□ -0.92
RFC4-209ENST00000448497 FAM9BQ8IZU0 186 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 POGKQ9P215 609 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 TBX22Q9Y458 520 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 ATP7BP35670 1465 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 KIF20BQ96Q89 1820 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 BLMP54132 1417 aaPredicted RBP9.31□□□□□ -0.92
RFC4-209ENST00000448497 NSD3Q9BZ95 1437 aa9.31□□□□□ -0.92
RFC4-209ENST00000448497 CD163L1Q9NR16 1453 aa9.3□□□□□ -0.92
RFC4-209ENST00000448497 PIK3R4Q99570 1358 aa9.3□□□□□ -0.92
RFC4-209ENST00000448497 PPP2R1AP30153 589 aa9.3□□□□□ -0.92
RFC4-209ENST00000448497 CC2D1BQ5T0F9 858 aaKnown RBP9.3□□□□□ -0.92
RFC4-209ENST00000448497 SLC12A5Q9H2X9 1139 aa9.3□□□□□ -0.92
RFC4-209ENST00000448497 STK26Q9P289 416 aa9.3□□□□□ -0.92
RFC4-209ENST00000448497 PTCH1Q13635 1447 aa9.3□□□□□ -0.92
RFC4-209ENST00000448497 CGNL1Q0VF96 1302 aa9.3□□□□□ -0.92
RFC4-209ENST00000448497 AKAP12Q02952 1782 aa9.29□□□□□ -0.92
RFC4-209ENST00000448497 LTKP29376 864 aa9.29□□□□□ -0.92
RFC4-209ENST00000448497 TXNDC2Q86VQ3 553 aa9.29□□□□□ -0.92
RFC4-209ENST00000448497 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
RFC4-209ENST00000448497 TOPAZ1Q8N9V7 1692 aa9.29□□□□□ -0.92
RFC4-209ENST00000448497 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
RFC4-209ENST00000448497 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
RFC4-209ENST00000448497 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.28□□□□□ -0.92
RFC4-209ENST00000448497 POLR3AO14802 1390 aaPredicted RBP9.28□□□□□ -0.92
RFC4-209ENST00000448497 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
RFC4-209ENST00000448497 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
RFC4-209ENST00000448497 TERF2IPQ9NYB0 399 aa9.28□□□□□ -0.92
RFC4-209ENST00000448497 ITSN1Q15811 1721 aa9.28□□□□□ -0.92
RFC4-209ENST00000448497 A0A1W2PP64 1363 aa9.27□□□□□ -0.93
RFC4-209ENST00000448497 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
RFC4-209ENST00000448497 SMG6Q86US8 1419 aaKnown RBP9.27□□□□□ -0.93
RFC4-209ENST00000448497 CDC42BPGQ6DT37 1551 aa9.27□□□□□ -0.93
RFC4-209ENST00000448497 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.93
RFC4-209ENST00000448497 SHPRHQ149N8 1683 aa9.26□□□□□ -0.93
RFC4-209ENST00000448497 PLEKHH1Q9ULM0 1364 aa9.26□□□□□ -0.93
RFC4-209ENST00000448497 CPSF1Q10570 1443 aaKnown RBP9.26□□□□□ -0.93
RFC4-209ENST00000448497 PTPRUQ92729 1446 aa9.26□□□□□ -0.93
RFC4-209ENST00000448497 WASLO00401 505 aaPredicted RBP9.26□□□□□ -0.93
RFC4-209ENST00000448497 SRPK2P78362 688 aaKnown RBP9.26□□□□□ -0.93
RFC4-209ENST00000448497 SLC39A7Q92504 469 aa9.26□□□□□ -0.93
RFC4-209ENST00000448497 ROBO2Q9HCK4 1378 aa9.25□□□□□ -0.93
RFC4-209ENST00000448497 ILDR1Q86SU0 546 aaPredicted RBP9.25□□□□□ -0.93
RFC4-209ENST00000448497 NGEFQ8N5V2 710 aa9.25□□□□□ -0.93
RFC4-209ENST00000448497 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
RFC4-209ENST00000448497 PDE3BQ13370 1112 aa9.24□□□□□ -0.93
RFC4-209ENST00000448497 SAFB2Q14151 953 aaKnown RBP eCLIP9.24□□□□□ -0.93
RFC4-209ENST00000448497 HDGFL2Q7Z4V5 671 aaPredicted RBP9.24□□□□□ -0.93
RFC4-209ENST00000448497 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms