RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
CNOT3-204ENST00000447684 U2AF1L5P0DN76 240 aaPredicted RBP19.86■□□□□ 0.77
CNOT3-204ENST00000447684 PRIM1P49642 420 aaKnown RBP19.86■□□□□ 0.77
CNOT3-204ENST00000447684 U2AF1Q01081 240 aaKnown RBP eCLIP19.86■□□□□ 0.77
CNOT3-204ENST00000447684 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.86■□□□□ 0.77
CNOT3-204ENST00000447684 SMAP1Q8IYB5 467 aaPredicted RBP19.86■□□□□ 0.77
CNOT3-204ENST00000447684 SSH1Q8WYL5 1049 aa19.86■□□□□ 0.77
CNOT3-204ENST00000447684 RBM27Q9P2N5 1060 aaKnown RBP19.86■□□□□ 0.77
CNOT3-204ENST00000447684 NOB1Q9ULX3 412 aaKnown RBP19.86■□□□□ 0.77
CNOT3-204ENST00000447684 ZNF500O60304 480 aaPredicted RBP19.85■□□□□ 0.77
CNOT3-204ENST00000447684 CCDC27Q2M243 656 aa19.85■□□□□ 0.77
CNOT3-204ENST00000447684 ANKRD45Q5TZF3 282 aa19.85■□□□□ 0.77
CNOT3-204ENST00000447684 CHD1LQ86WJ1 897 aa19.85■□□□□ 0.77
CNOT3-204ENST00000447684 ATF7IPQ6VMQ6 1270 aa19.84■□□□□ 0.77
CNOT3-204ENST00000447684 DYNC1I1O14576 645 aa19.84■□□□□ 0.77
CNOT3-204ENST00000447684 MTHFSP49914 203 aa19.84■□□□□ 0.77
CNOT3-204ENST00000447684 NUCB1Q02818 461 aa19.84■□□□□ 0.77
CNOT3-204ENST00000447684 DNTTIP2Q5QJE6 756 aaKnown RBP19.84■□□□□ 0.77
CNOT3-204ENST00000447684 ZKSCAN5Q9Y2L8 839 aa19.84■□□□□ 0.77
CNOT3-204ENST00000447684 ZNF445P59923 1031 aa19.83■□□□□ 0.77
CNOT3-204ENST00000447684 ABCA6Q8N139 1617 aa19.83■□□□□ 0.77
CNOT3-204ENST00000447684 MYO3AQ8NEV4 1616 aa19.83■□□□□ 0.77
CNOT3-204ENST00000447684 MAP3K4Q9Y6R4 1608 aa19.83■□□□□ 0.77
CNOT3-204ENST00000447684 CSPP1Q1MSJ5 1256 aa19.83■□□□□ 0.77
CNOT3-204ENST00000447684 HS1BP3Q53T59 392 aa19.83■□□□□ 0.77
CNOT3-204ENST00000447684 RNF214Q8ND24 703 aa19.83■□□□□ 0.77
CNOT3-204ENST00000447684 NEURL4Q96JN8 1562 aa19.83■□□□□ 0.76
CNOT3-204ENST00000447684 PRPF40AO75400 957 aaKnown RBP19.83■□□□□ 0.76
CNOT3-204ENST00000447684 PTMAP06454 111 aaKnown RBP19.83■□□□□ 0.76
CNOT3-204ENST00000447684 TBC1D9Q6ZT07 1266 aa19.82■□□□□ 0.76
CNOT3-204ENST00000447684 MTERF4Q7Z6M4 381 aaKnown RBP19.82■□□□□ 0.76
CNOT3-204ENST00000447684 PKP1Q13835 747 aa19.81■□□□□ 0.76
CNOT3-204ENST00000447684 NSD3Q9BZ95 1437 aa19.81■□□□□ 0.76
CNOT3-204ENST00000447684 CFAP70Q5T0N1 1121 aa19.81■□□□□ 0.76
CNOT3-204ENST00000447684 SASS6Q6UVJ0 657 aa19.81■□□□□ 0.76
CNOT3-204ENST00000447684 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
CNOT3-204ENST00000447684 IBTKQ9P2D0 1353 aaPredicted RBP19.81■□□□□ 0.76
CNOT3-204ENST00000447684 MYOM2P54296 1465 aa19.81■□□□□ 0.76
CNOT3-204ENST00000447684 MPNDQ8N594 471 aa19.8■□□□□ 0.76
CNOT3-204ENST00000447684 SBNO2Q9Y2G9 1366 aa19.8■□□□□ 0.76
CNOT3-204ENST00000447684 TET3O43151 1660 aa19.8■□□□□ 0.76
CNOT3-204ENST00000447684 BMP2KLQ5H9B9 411 aa19.8■□□□□ 0.76
CNOT3-204ENST00000447684 FOXD4L5Q5VV16 416 aaPredicted RBP19.8■□□□□ 0.76
CNOT3-204ENST00000447684 FOXD4L4Q8WXT5 416 aaPredicted RBP19.8■□□□□ 0.76
CNOT3-204ENST00000447684 JARID2Q92833 1246 aaPredicted RBP19.8■□□□□ 0.76
CNOT3-204ENST00000447684 NCBP3Q53F19 620 aaKnown RBP19.79■□□□□ 0.76
CNOT3-204ENST00000447684 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
CNOT3-204ENST00000447684 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
CNOT3-204ENST00000447684 AK9Q5TCS8 1911 aa19.79■□□□□ 0.76
CNOT3-204ENST00000447684 ZBTB40Q9NUA8 1239 aa19.79■□□□□ 0.76
CNOT3-204ENST00000447684 LMBRD1Q9NUN5 540 aa19.79■□□□□ 0.76
CNOT3-204ENST00000447684 DEPDC5O75140 1603 aa19.79■□□□□ 0.76
CNOT3-204ENST00000447684 SYCE3A1L190 88 aa19.78■□□□□ 0.76
CNOT3-204ENST00000447684 TSC1Q92574 1164 aa19.78■□□□□ 0.76
CNOT3-204ENST00000447684 CHAMP1Q96JM3 812 aa19.78■□□□□ 0.76
CNOT3-204ENST00000447684 PDLIM2Q96JY6 352 aa19.78■□□□□ 0.76
CNOT3-204ENST00000447684 ABCC1P33527 1531 aa19.78■□□□□ 0.76
CNOT3-204ENST00000447684 KIF16BQ96L93 1317 aa19.78■□□□□ 0.76
CNOT3-204ENST00000447684 CT47B1P0C2W7 299 aaPredicted RBP19.77■□□□□ 0.76
CNOT3-204ENST00000447684 SLC12A5Q9H2X9 1139 aa19.77■□□□□ 0.76
CNOT3-204ENST00000447684 CCDC39Q9UFE4 941 aa19.77■□□□□ 0.76
CNOT3-204ENST00000447684 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.75
CNOT3-204ENST00000447684 ADGRB2O60241 1585 aa19.76■□□□□ 0.75
CNOT3-204ENST00000447684 NUCB2P80303 420 aa19.76■□□□□ 0.75
CNOT3-204ENST00000447684 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
CNOT3-204ENST00000447684 CCDC94Q9BW85 323 aaPredicted RBP19.75■□□□□ 0.75
CNOT3-204ENST00000447684 PLCH2O75038 1416 aa19.75■□□□□ 0.75
CNOT3-204ENST00000447684 TRAPPC8Q9Y2L5 1435 aa19.75■□□□□ 0.75
CNOT3-204ENST00000447684 CBX1P83916 185 aa19.74■□□□□ 0.75
CNOT3-204ENST00000447684 CLEC17AQ6ZS10 378 aa19.74■□□□□ 0.75
CNOT3-204ENST00000447684 GPT2Q8TD30 523 aa19.74■□□□□ 0.75
CNOT3-204ENST00000447684 ADGRL1O94910 1474 aa19.74■□□□□ 0.75
CNOT3-204ENST00000447684 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
CNOT3-204ENST00000447684 ADGRF5Q8IZF2 1346 aa19.73■□□□□ 0.75
CNOT3-204ENST00000447684 FAM177BA6PVY3 158 aa19.72■□□□□ 0.75
CNOT3-204ENST00000447684 IPO8O15397 1037 aaKnown RBP19.72■□□□□ 0.75
CNOT3-204ENST00000447684 DMTNQ08495 405 aa19.72■□□□□ 0.75
CNOT3-204ENST00000447684 TMEM63CQ9P1W3 806 aa19.72■□□□□ 0.75
CNOT3-204ENST00000447684 MCM5P33992 734 aa19.71■□□□□ 0.75
CNOT3-204ENST00000447684 ZGPATQ8N5A5 531 aaKnown RBP19.71■□□□□ 0.75
CNOT3-204ENST00000447684 ZFYVE16Q7Z3T8 1539 aa19.71■□□□□ 0.75
CNOT3-204ENST00000447684 VWDEQ8N2E2 1590 aa19.71■□□□□ 0.75
CNOT3-204ENST00000447684 ZC3H13Q5T200 1668 aaKnown RBP19.71■□□□□ 0.75
CNOT3-204ENST00000447684 KIAA2012Q0VF49 1180 aa19.71■□□□□ 0.75
CNOT3-204ENST00000447684 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
CNOT3-204ENST00000447684 CDC45O75419 566 aa19.7■□□□□ 0.74
CNOT3-204ENST00000447684 LRSAM1Q6UWE0 723 aa19.7■□□□□ 0.74
CNOT3-204ENST00000447684 NSFL1CQ9UNZ2 370 aaKnown RBP19.7■□□□□ 0.74
CNOT3-204ENST00000447684 KIF1BO60333 1816 aa19.69■□□□□ 0.74
CNOT3-204ENST00000447684 RABEP1Q15276 862 aa19.69■□□□□ 0.74
CNOT3-204ENST00000447684 NRXN1Q9ULB1 1477 aa19.69■□□□□ 0.74
CNOT3-204ENST00000447684 ZSCAN20P17040 1043 aaPredicted RBP19.69■□□□□ 0.74
CNOT3-204ENST00000447684 SPAG9O60271 1321 aaKnown RBP19.68■□□□□ 0.74
CNOT3-204ENST00000447684 ZNF830Q96NB3 372 aaPredicted RBP19.68■□□□□ 0.74
CNOT3-204ENST00000447684 UGGT1Q9NYU2 1555 aa19.68■□□□□ 0.74
CNOT3-204ENST00000447684 INO80Q9ULG1 1556 aaPredicted RBP19.68■□□□□ 0.74
CNOT3-204ENST00000447684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.68■□□□□ 0.74
CNOT3-204ENST00000447684 SETBP1Q9Y6X0 1596 aa19.68■□□□□ 0.74
CNOT3-204ENST00000447684 CFAP74Q9C0B2 1584 aa19.67■□□□□ 0.74
CNOT3-204ENST00000447684 TPRNQ4KMQ1 711 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms