RNA–Protein interactions for RNA: ENST00000447470.1

CDRT15P2-201, Transcript of CMT1A duplicated region transcript 15 pseudogene 2, humanhuman

BASIC

Gene CDRT15P2, Length 416 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15P2-201ENST00000447470 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
CDRT15P2-201ENST00000447470 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
CDRT15P2-201ENST00000447470 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
CDRT15P2-201ENST00000447470 KNDC1Q76NI1 1749 aa15.23■□□□□ 0.03
CDRT15P2-201ENST00000447470 METP08581 1390 aa15.23■□□□□ 0.03
CDRT15P2-201ENST00000447470 JCADQ9P266 1359 aa15.23■□□□□ 0.03
CDRT15P2-201ENST00000447470 CD163L1Q9NR16 1453 aa15.22■□□□□ 0.03
CDRT15P2-201ENST00000447470 GOLGA2Q08379 1002 aa15.22■□□□□ 0.03
CDRT15P2-201ENST00000447470 PIK3R4Q99570 1358 aa15.22■□□□□ 0.03
CDRT15P2-201ENST00000447470 WASLO00401 505 aaPredicted RBP15.21■□□□□ 0.03
CDRT15P2-201ENST00000447470 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.02
CDRT15P2-201ENST00000447470 TRMT2AQ8IZ69 625 aaKnown RBP15.2■□□□□ 0.02
CDRT15P2-201ENST00000447470 MTHFSP49914 203 aa15.19■□□□□ 0.02
CDRT15P2-201ENST00000447470 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
CDRT15P2-201ENST00000447470 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
CDRT15P2-201ENST00000447470 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
CDRT15P2-201ENST00000447470 FYB1O15117 783 aa15.18■□□□□ 0.02
CDRT15P2-201ENST00000447470 SLFN5Q08AF3 891 aa15.18■□□□□ 0.02
CDRT15P2-201ENST00000447470 DUSP27Q5VZP5 1158 aa15.18■□□□□ 0.02
CDRT15P2-201ENST00000447470 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
CDRT15P2-201ENST00000447470 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
CDRT15P2-201ENST00000447470 AMOTL2Q9Y2J4 779 aa15.18■□□□□ 0.02
CDRT15P2-201ENST00000447470 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
CDRT15P2-201ENST00000447470 E9PSI1 815 aa15.17■□□□□ 0.02
CDRT15P2-201ENST00000447470 BRINP3Q76B58 766 aa15.17■□□□□ 0.02
CDRT15P2-201ENST00000447470 CABP1Q9NZU7 370 aa15.17■□□□□ 0.02
CDRT15P2-201ENST00000447470 MST1RQ04912 1400 aa15.17■□□□□ 0.02
CDRT15P2-201ENST00000447470 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
CDRT15P2-201ENST00000447470 APAF1O14727 1248 aa15.16■□□□□ 0.02
CDRT15P2-201ENST00000447470 CCDC27Q2M243 656 aa15.16■□□□□ 0.02
CDRT15P2-201ENST00000447470 C19orf44Q9H6X5 657 aa15.16■□□□□ 0.02
CDRT15P2-201ENST00000447470 EDC4Q6P2E9 1401 aaKnown RBP15.16■□□□□ 0.02
CDRT15P2-201ENST00000447470 CCDC61Q9Y6R9 512 aa15.15■□□□□ 0.02
CDRT15P2-201ENST00000447470 ADGRB2O60241 1585 aa15.15■□□□□ 0.02
CDRT15P2-201ENST00000447470 PNPLA6Q8IY17 1366 aa15.14■□□□□ 0.01
CDRT15P2-201ENST00000447470 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
CDRT15P2-201ENST00000447470 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
CDRT15P2-201ENST00000447470 DCCP43146 1447 aa15.14■□□□□ 0.01
CDRT15P2-201ENST00000447470 CDC42BPGQ6DT37 1551 aa15.14■□□□□ 0.01
CDRT15P2-201ENST00000447470 SENP3-EIF4A1A0A087X0R7 540 aa15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 WDR63Q8IWG1 891 aa15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 CCDC146Q8IYE0 955 aa15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 NUDT16Q96DE0 195 aaKnown RBP15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 NHSL1Q5SYE7 1610 aa15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 SPATA31A6Q5VVP1 1343 aa15.13■□□□□ 0.01
CDRT15P2-201ENST00000447470 NALCNQ8IZF0 1738 aa15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 PTCH1Q13635 1447 aa15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 PPIP5K1Q6PFW1 1433 aa15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 DDX17Q92841 729 aaKnown RBP15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 GGNBP2Q9H3C7 697 aa15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 ANKRD26Q9UPS8 1709 aa15.12■□□□□ 0.01
CDRT15P2-201ENST00000447470 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
CDRT15P2-201ENST00000447470 CCDC136Q96JN2 1154 aa15.11■□□□□ 0.01
CDRT15P2-201ENST00000447470 COL3A1P02461 1466 aaPredicted RBP15.11■□□□□ 0.01
CDRT15P2-201ENST00000447470 ADGRL3Q9HAR2 1447 aa15.1■□□□□ 0.01
CDRT15P2-201ENST00000447470 ATF3P18847 181 aa15.1■□□□□ 0.01
CDRT15P2-201ENST00000447470 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
CDRT15P2-201ENST00000447470 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
CDRT15P2-201ENST00000447470 AATKQ6ZMQ8 1374 aa15.1■□□□□ 0.01
CDRT15P2-201ENST00000447470 PLEKHG3A1L390 1219 aa15.09■□□□□ 0.01
CDRT15P2-201ENST00000447470 TCP11L2Q8N4U5 519 aa15.08■□□□□ 0
CDRT15P2-201ENST00000447470 DIAPH1O60610 1272 aaKnown RBP15.07■□□□□ 0
CDRT15P2-201ENST00000447470 U2AF1L5P0DN76 240 aaPredicted RBP15.07■□□□□ 0
CDRT15P2-201ENST00000447470 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
CDRT15P2-201ENST00000447470 UPF1Q92900 1129 aaKnown RBP eCLIP15.05■□□□□ -0
CDRT15P2-201ENST00000447470 C1orf167Q5SNV9 1468 aa15.05■□□□□ -0
CDRT15P2-201ENST00000447470 KIF20BQ96Q89 1820 aa15.04■□□□□ -0
CDRT15P2-201ENST00000447470 IL16Q14005 1332 aa15.04■□□□□ -0
CDRT15P2-201ENST00000447470 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
CDRT15P2-201ENST00000447470 FCHSD2O94868 740 aa15.04■□□□□ -0
CDRT15P2-201ENST00000447470 CT47B1P0C2W7 299 aaPredicted RBP15.04■□□□□ -0
CDRT15P2-201ENST00000447470 EXOC6Q8TAG9 804 aa15.04■□□□□ -0
CDRT15P2-201ENST00000447470 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
CDRT15P2-201ENST00000447470 NUTM2BA6NNL0 878 aaPredicted RBP15.03■□□□□ -0
CDRT15P2-201ENST00000447470 NUTM2EB1AL46 878 aaPredicted RBP15.03■□□□□ -0
CDRT15P2-201ENST00000447470 NUTM2AQ8IVF1 878 aaPredicted RBP15.03■□□□□ -0
CDRT15P2-201ENST00000447470 COG3Q96JB2 828 aa15.03■□□□□ -0
CDRT15P2-201ENST00000447470 MYH16Q9H6N6 1097 aa15.03■□□□□ -0
CDRT15P2-201ENST00000447470 POLKQ9UBT6 870 aa15.03■□□□□ -0
CDRT15P2-201ENST00000447470 CDK12Q9NYV4 1490 aaPredicted RBP15.02■□□□□ -0
CDRT15P2-201ENST00000447470 AFF2P51816 1311 aa15.02■□□□□ -0
CDRT15P2-201ENST00000447470 MEX3CQ5U5Q3 659 aaKnown RBP15.02■□□□□ -0
CDRT15P2-201ENST00000447470 ZNF772Q68DY9 489 aaPredicted RBP15.02■□□□□ -0
CDRT15P2-201ENST00000447470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.02■□□□□ -0
CDRT15P2-201ENST00000447470 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
CDRT15P2-201ENST00000447470 RGS12O14924 1447 aa15.01□□□□□ -0.01
CDRT15P2-201ENST00000447470 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
CDRT15P2-201ENST00000447470 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
CDRT15P2-201ENST00000447470 MON2Q7Z3U7 1717 aa15□□□□□ -0.01
CDRT15P2-201ENST00000447470 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
CDRT15P2-201ENST00000447470 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
CDRT15P2-201ENST00000447470 ORAI2Q96SN7 254 aa15□□□□□ -0.01
CDRT15P2-201ENST00000447470 TTC21BQ7Z4L5 1316 aa14.99□□□□□ -0.01
CDRT15P2-201ENST00000447470 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
CDRT15P2-201ENST00000447470 AAMPQ13685 434 aa14.99□□□□□ -0.01
CDRT15P2-201ENST00000447470 PDE3AQ14432 1141 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms