RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
HMGB1P16-201ENST00000447155 EVA1BQ9NVM1 165 aa8.27□□□□□ -1.09
HMGB1P16-201ENST00000447155 SOX11P35716 441 aa8.26□□□□□ -1.09
HMGB1P16-201ENST00000447155 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
HMGB1P16-201ENST00000447155 SLC6A16Q9GZN6 736 aa8.26□□□□□ -1.09
HMGB1P16-201ENST00000447155 HDGFL1Q5TGJ6 251 aa8.25□□□□□ -1.09
HMGB1P16-201ENST00000447155 ARMC2Q8NEN0 867 aa8.25□□□□□ -1.09
HMGB1P16-201ENST00000447155 PCDH10Q9P2E7 1040 aa8.25□□□□□ -1.09
HMGB1P16-201ENST00000447155 NR1H3Q13133 447 aa8.24□□□□□ -1.09
HMGB1P16-201ENST00000447155 ADAMTS19Q8TE59 1207 aa8.24□□□□□ -1.09
HMGB1P16-201ENST00000447155 ALG2Q9H553 416 aa8.24□□□□□ -1.09
HMGB1P16-201ENST00000447155 ZBBXA8MT70 800 aa8.23□□□□□ -1.09
HMGB1P16-201ENST00000447155 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.09
HMGB1P16-201ENST00000447155 HCSTQ9UBK5 93 aa8.23□□□□□ -1.09
HMGB1P16-201ENST00000447155 FBXO45P0C2W1 286 aa8.22□□□□□ -1.09
HMGB1P16-201ENST00000447155 EIF4G2P78344 907 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMGB1P16-201ENST00000447155 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
HMGB1P16-201ENST00000447155 SEMA3FQ13275 785 aa8.21□□□□□ -1.1
HMGB1P16-201ENST00000447155 CCDC24Q8N4L8 307 aa8.21□□□□□ -1.1
HMGB1P16-201ENST00000447155 NKX2-3Q8TAU0 364 aa8.21□□□□□ -1.1
HMGB1P16-201ENST00000447155 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P16-201ENST00000447155 GPSM3Q9Y4H4 160 aa8.21□□□□□ -1.1
HMGB1P16-201ENST00000447155 S1PR4O95977 384 aa8.2□□□□□ -1.1
HMGB1P16-201ENST00000447155 PDXDC2PQ6P474 469 aa8.2□□□□□ -1.1
HMGB1P16-201ENST00000447155 PTK2Q05397 1052 aa8.19□□□□□ -1.1
HMGB1P16-201ENST00000447155 SPNS2Q8IVW8 549 aa8.19□□□□□ -1.1
HMGB1P16-201ENST00000447155 UNC93B1Q9H1C4 597 aa8.19□□□□□ -1.1
HMGB1P16-201ENST00000447155 ITGBL1O95965 494 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P16-201ENST00000447155 KCNC4Q03721 635 aa8.18□□□□□ -1.1
HMGB1P16-201ENST00000447155 PTCRAQ6ISU1 281 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P16-201ENST00000447155 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
HMGB1P16-201ENST00000447155 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
HMGB1P16-201ENST00000447155 PPP1R12CQ9BZL4 782 aa8.16□□□□□ -1.1
HMGB1P16-201ENST00000447155 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P16-201ENST00000447155 MCCD1P59942 119 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P16-201ENST00000447155 ARHGAP9Q9BRR9 750 aa8.15□□□□□ -1.1
HMGB1P16-201ENST00000447155 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
HMGB1P16-201ENST00000447155 SH3BP5LQ7L8J4 393 aa8.14□□□□□ -1.11
HMGB1P16-201ENST00000447155 UCN2Q96RP3 112 aa8.14□□□□□ -1.11
HMGB1P16-201ENST00000447155 OCSTAMPQ9BR26 566 aa8.14□□□□□ -1.11
HMGB1P16-201ENST00000447155 PALM3A6NDB9 673 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P16-201ENST00000447155 GGCXP38435 758 aa8.13□□□□□ -1.11
HMGB1P16-201ENST00000447155 TFIP11Q9UBB9 837 aaKnown RBP8.13□□□□□ -1.11
HMGB1P16-201ENST00000447155 ZBTB33Q86T24 672 aa8.12□□□□□ -1.11
HMGB1P16-201ENST00000447155 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
HMGB1P16-201ENST00000447155 BAP1Q92560 729 aa8.12□□□□□ -1.11
HMGB1P16-201ENST00000447155 PBXIP1Q96AQ6 731 aa8.12□□□□□ -1.11
HMGB1P16-201ENST00000447155 PCDHB9Q9Y5E1 797 aa8.12□□□□□ -1.11
HMGB1P16-201ENST00000447155 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
HMGB1P16-201ENST00000447155 ATP9BO43861 1147 aa8.11□□□□□ -1.11
HMGB1P16-201ENST00000447155 SH3RF1Q7Z6J0 888 aa8.11□□□□□ -1.11
HMGB1P16-201ENST00000447155 BPHLQ86WA6 291 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P16-201ENST00000447155 ANKLE1Q8NAG6 615 aa8.11□□□□□ -1.11
HMGB1P16-201ENST00000447155 ZNF511Q8NB15 262 aa8.11□□□□□ -1.11
HMGB1P16-201ENST00000447155 NFATC2IPQ8NCF5 419 aa8.11□□□□□ -1.11
HMGB1P16-201ENST00000447155 ACIN1Q9UKV3 1341 aaKnown RBP8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 PPEF1O14829 653 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 RFX1P22670 979 aa8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 MAFBQ9Y5Q3 323 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P16-201ENST00000447155 ZBTB24O43167 697 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P16-201ENST00000447155 AGERQ15109 404 aa8.09□□□□□ -1.11
HMGB1P16-201ENST00000447155 FOXJ1Q92949 421 aa8.09□□□□□ -1.11
HMGB1P16-201ENST00000447155 CARD14Q9BXL6 1004 aa8.09□□□□□ -1.11
HMGB1P16-201ENST00000447155 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
HMGB1P16-201ENST00000447155 PDIA4P13667 645 aaKnown RBP8.08□□□□□ -1.12
HMGB1P16-201ENST00000447155 SRPK2P78362 688 aaKnown RBP8.08□□□□□ -1.12
HMGB1P16-201ENST00000447155 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
HMGB1P16-201ENST00000447155 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
HMGB1P16-201ENST00000447155 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.08□□□□□ -1.12
HMGB1P16-201ENST00000447155 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P16-201ENST00000447155 PIK3CDO00329 1044 aa8.07□□□□□ -1.12
HMGB1P16-201ENST00000447155 TRIM32Q13049 653 aa8.07□□□□□ -1.12
HMGB1P16-201ENST00000447155 ERFEQ4G0M1 354 aa8.07□□□□□ -1.12
HMGB1P16-201ENST00000447155 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
HMGB1P16-201ENST00000447155 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
HMGB1P16-201ENST00000447155 SKIP12755 728 aa8.06□□□□□ -1.12
HMGB1P16-201ENST00000447155 SH3BP2P78314 561 aa8.06□□□□□ -1.12
HMGB1P16-201ENST00000447155 C4orf48Q5BLP8 95 aa8.06□□□□□ -1.12
HMGB1P16-201ENST00000447155 PLA2G2CQ5R387 149 aa8.06□□□□□ -1.12
HMGB1P16-201ENST00000447155 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
HMGB1P16-201ENST00000447155 RETREG2Q8NC44 543 aa8.06□□□□□ -1.12
HMGB1P16-201ENST00000447155 RPIAP49247 311 aa8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 WNT7BP56706 349 aa8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 MMRN1Q13201 1228 aa8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 PLEKHM2Q8IWE5 1019 aa8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 FAM174AQ8TBP5 190 aa8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 SLC10A4Q96EP9 437 aa8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 CDV3Q9UKY7 258 aaKnown RBP8.05□□□□□ -1.12
HMGB1P16-201ENST00000447155 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 USP17L5A8MUK1 530 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 PDE4CQ08493 712 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 IFFO2Q5TF58 517 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
HMGB1P16-201ENST00000447155 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms