RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PLIN1O60240 522 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 ATG7O95352 703 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 CD53P19397 219 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 ATP2B1P20020 1258 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 HSD3B2P26439 372 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 POLD1P28340 1107 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 GNL2Q13823 731 aaKnown RBP3.52□□□□□ -1.85
UBBP3-201ENST00000445497 PUS10Q3MIT2 529 aaKnown RBP3.52□□□□□ -1.85
UBBP3-201ENST00000445497 CC2D1BQ5T0F9 858 aaKnown RBP3.52□□□□□ -1.85
UBBP3-201ENST00000445497 DCAF8Q5TAQ9 597 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.52□□□□□ -1.85
UBBP3-201ENST00000445497 PRPF38AQ8NAV1 312 aaKnown RBP3.52□□□□□ -1.85
UBBP3-201ENST00000445497 VTI1AQ96AJ9 217 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 FAM212AQ96EL1 285 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 TYW1Q9NV66 732 aaKnown RBP3.52□□□□□ -1.85
UBBP3-201ENST00000445497 TCEAL9Q9UHQ7 104 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 SYNPO2Q9UMS6 1093 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 SH3BP1Q9Y3L3 701 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 GOLGA6CA6NDK9 693 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 GOLGA6BA6NDN3 693 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 IRF6O14896 467 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 RECKO95980 971 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 GOLGA6DP0CG33 693 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 COL6A1P12109 1028 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 GTF2E1P29083 439 aaPredicted RBP3.51□□□□□ -1.85
UBBP3-201ENST00000445497 PSMC1P62191 440 aaKnown RBP3.51□□□□□ -1.85
UBBP3-201ENST00000445497 HDLBPQ00341 1268 aaKnown RBP3.51□□□□□ -1.85
UBBP3-201ENST00000445497 LMOD3Q0VAK6 560 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 FAM161AQ3B820 660 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 PLEKHG6Q3KR16 790 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 CCDC144BQ3MJ40 725 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 TMEM259Q4ZIN3 620 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 EFCAB2Q5VUJ9 269 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 DDX46Q7L014 1031 aaKnown RBP3.51□□□□□ -1.85
UBBP3-201ENST00000445497 GET4Q7L5D6 327 aaPredicted RBP3.51□□□□□ -1.85
UBBP3-201ENST00000445497 SLC43A3Q8NBI5 491 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 PPM1EQ8WY54 764 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 RUNDC1Q96C34 613 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 FMNL2Q96PY5 1086 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 EPAS1Q99814 870 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 SRRTQ9BXP5 876 aaKnown RBP3.51□□□□□ -1.85
UBBP3-201ENST00000445497 INO80BQ9C086 356 aaPredicted RBP3.51□□□□□ -1.85
UBBP3-201ENST00000445497 GOLGA6AQ9NYA3 693 aa3.51□□□□□ -1.85
UBBP3-201ENST00000445497 TMEM88BA6NKF7 163 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 SCAMP3O14828 347 aaKnown RBP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 TIMM44O43615 452 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 GIGYF1O75420 1035 aaPredicted RBP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 FAM200BP0CF97 657 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 SRPK2P78362 688 aaKnown RBP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 IRX3P78415 501 aaPredicted RBP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 MAPRE1Q15691 268 aaKnown RBP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 VPS72Q15906 364 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 CFAP70Q5T0N1 1121 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 TAF3Q5VWG9 929 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 RPAINQ86UA6 219 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 C1orf131Q8NDD1 294 aaKnown RBP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 TMC2Q8TDI7 906 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 PIK3R5Q8WYR1 880 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 C8orf48Q96LL4 319 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 STAC3Q96MF2 364 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 FRMD6Q96NE9 622 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 ZHX3Q9H4I2 956 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 IFT122Q9HBG6 1241 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 PRKAG2Q9UGJ0 569 aa3.5□□□□□ -1.85
UBBP3-201ENST00000445497 NOL7Q9UMY1 257 aaKnown RBP3.5□□□□□ -1.85
UBBP3-201ENST00000445497 SYNRGQ9UMZ2 1314 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 ANKRD33BA6NCL7 494 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 PPP1R12AO14974 1030 aaPredicted RBP3.49□□□□□ -1.85
UBBP3-201ENST00000445497 DNAJC6O75061 913 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 HMMRO75330 724 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 RGS20O76081 388 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 RFX1P22670 979 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 NUBP1P53384 320 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 RASSF7Q02833 373 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 MTA1Q13330 715 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 SF3B2Q13435 895 aaKnown RBP3.49□□□□□ -1.85
UBBP3-201ENST00000445497 UBE4AQ14139 1066 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 TSNAXIP1Q2TAA8 658 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 NBPF6Q5VWK0 638 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 TTLL5Q6EMB2 1281 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 GIGYF2Q6Y7W6 1299 aaKnown RBP3.49□□□□□ -1.85
UBBP3-201ENST00000445497 ANKRD23Q86SG2 305 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 NBPF5PQ86XG9 351 aaPredicted RBP3.49□□□□□ -1.85
UBBP3-201ENST00000445497 CREBRFQ8IUR6 639 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 EGFL6Q8IUX8 553 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 STK11IPQ8N1F8 1099 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 PAF1Q8N7H5 531 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 SPDYE1Q8NFV5 336 aaPredicted RBP3.49□□□□□ -1.85
UBBP3-201ENST00000445497 NBPF4Q96M43 638 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 CEP89Q96ST8 783 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 CDC5LQ99459 802 aaKnown RBP3.49□□□□□ -1.85
UBBP3-201ENST00000445497 ZSWIM4Q9H7M6 989 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 PCDH12Q9NPG4 1184 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 NRBP1Q9UHY1 535 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 AKAP2Q9Y2D5 859 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 PRKAB1Q9Y478 270 aa3.49□□□□□ -1.85
UBBP3-201ENST00000445497 KIF3BO15066 747 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 VIL1P09327 827 aaKnown RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 CT47B1P0C2W7 299 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms