RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 K7ELQ4 463 aaPredicted RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 SMG6Q86US8 1419 aaKnown RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 DDX58O95786 925 aaKnown RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 GTF2E1P29083 439 aaPredicted RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 USP8P40818 1118 aa22.28■■□□□ 1.16
SHANK3-203ENST00000445220 TROQ12816 1431 aaPredicted RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 NAP1L1P55209 391 aaKnown RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 AXDND1Q5T1B0 1012 aaPredicted RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 C9orf78Q9NZ63 289 aaPredicted RBP22.28■■□□□ 1.16
SHANK3-203ENST00000445220 SCAPERQ9BY12 1400 aa22.28■■□□□ 1.16
SHANK3-203ENST00000445220 CCDC27Q2M243 656 aa22.27■■□□□ 1.16
SHANK3-203ENST00000445220 TRDNQ13061 729 aa22.27■■□□□ 1.16
SHANK3-203ENST00000445220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.27■■□□□ 1.157e-7■■■□□ 16.5
SHANK3-203ENST00000445220 ADAMTS8Q9UP79 889 aa22.27■■□□□ 1.15
SHANK3-203ENST00000445220 FIBPO43427 364 aa22.26■■□□□ 1.15
SHANK3-203ENST00000445220 C9orf84Q5VXU9 1444 aa22.26■■□□□ 1.15
SHANK3-203ENST00000445220 PSMA5P28066 241 aa22.26■■□□□ 1.15
SHANK3-203ENST00000445220 DEF6Q9H4E7 631 aa22.26■■□□□ 1.15
SHANK3-203ENST00000445220 DCAF8L1A6NGE4 600 aa22.25■■□□□ 1.15
SHANK3-203ENST00000445220 SAFBQ15424 915 aaKnown RBP eCLIP22.25■■□□□ 1.15
SHANK3-203ENST00000445220 HSP90AB3PQ58FF7 597 aa22.25■■□□□ 1.15
SHANK3-203ENST00000445220 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
SHANK3-203ENST00000445220 HECW1Q76N89 1606 aa22.25■■□□□ 1.15
SHANK3-203ENST00000445220 EIF3JO75822 258 aaKnown RBP22.25■■□□□ 1.15
SHANK3-203ENST00000445220 KIAA0754O94854 1291 aa22.25■■□□□ 1.15
SHANK3-203ENST00000445220 PSME1Q06323 249 aa22.24■■□□□ 1.15
SHANK3-203ENST00000445220 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
SHANK3-203ENST00000445220 ERLIN1O75477 346 aa22.24■■□□□ 1.15
SHANK3-203ENST00000445220 PRM3Q9NNZ6 103 aa22.24■■□□□ 1.15
SHANK3-203ENST00000445220 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
SHANK3-203ENST00000445220 POLA1P09884 1462 aaPredicted RBP22.23■■□□□ 1.15
SHANK3-203ENST00000445220 EIF2S2P20042 333 aaKnown RBP22.23■■□□□ 1.15
SHANK3-203ENST00000445220 FOSBP53539 338 aa22.23■■□□□ 1.15
SHANK3-203ENST00000445220 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
SHANK3-203ENST00000445220 G3BP1Q13283 466 aaKnown RBP eCLIP22.23■■□□□ 1.15
SHANK3-203ENST00000445220 FKBP5Q13451 457 aaPredicted RBP22.22■■□□□ 1.15
SHANK3-203ENST00000445220 MPNDQ8N594 471 aa22.22■■□□□ 1.15
SHANK3-203ENST00000445220 GCC1Q96CN9 775 aa22.22■■□□□ 1.15
SHANK3-203ENST00000445220 GGNBP2Q9H3C7 697 aa22.22■■□□□ 1.15
SHANK3-203ENST00000445220 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
SHANK3-203ENST00000445220 EVA1CP58658 441 aa22.22■■□□□ 1.15
SHANK3-203ENST00000445220 SMARCE1Q969G3 411 aa22.21■■□□□ 1.15
SHANK3-203ENST00000445220 ERICH4A6NGS2 130 aa22.21■■□□□ 1.15
SHANK3-203ENST00000445220 ZMYND15Q9H091 742 aa22.21■■□□□ 1.15
SHANK3-203ENST00000445220 NINLQ9Y2I6 1382 aa22.21■■□□□ 1.15
SHANK3-203ENST00000445220 ATF3P18847 181 aa22.2■■□□□ 1.14
SHANK3-203ENST00000445220 PIP4K2BP78356 416 aa22.2■■□□□ 1.14
SHANK3-203ENST00000445220 TTLL5Q6EMB2 1281 aa22.2■■□□□ 1.14
SHANK3-203ENST00000445220 CFAP70Q5T0N1 1121 aa22.2■■□□□ 1.14
SHANK3-203ENST00000445220 TSPYL4Q9UJ04 414 aa22.2■■□□□ 1.14
SHANK3-203ENST00000445220 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
SHANK3-203ENST00000445220 CABP2Q9NPB3 220 aa22.2■■□□□ 1.14
SHANK3-203ENST00000445220 FMNL2Q96PY5 1086 aa22.19■■□□□ 1.14
SHANK3-203ENST00000445220 PRDM10Q9NQV6 1147 aa22.19■■□□□ 1.14
SHANK3-203ENST00000445220 PPP2R1AP30153 589 aa22.19■■□□□ 1.14
SHANK3-203ENST00000445220 G3V3G9 751 aa22.19■■□□□ 1.14
SHANK3-203ENST00000445220 DCAF8Q5TAQ9 597 aa22.19■■□□□ 1.14
SHANK3-203ENST00000445220 NFXL1Q6ZNB6 911 aa22.19■■□□□ 1.14
SHANK3-203ENST00000445220 MTHFSP49914 203 aa22.18■■□□□ 1.14
SHANK3-203ENST00000445220 MYO6Q9UM54 1294 aa22.18■■□□□ 1.14
SHANK3-203ENST00000445220 FILIP1LQ4L180 1135 aa22.18■■□□□ 1.14
SHANK3-203ENST00000445220 TMEM132EQ6IEE7 984 aa22.18■■□□□ 1.14
SHANK3-203ENST00000445220 CBX1P83916 185 aa22.17■■□□□ 1.14
SHANK3-203ENST00000445220 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
SHANK3-203ENST00000445220 CNTROBQ8N137 903 aa22.17■■□□□ 1.14
SHANK3-203ENST00000445220 TNMDQ9H2S6 317 aa22.17■■□□□ 1.14
SHANK3-203ENST00000445220 TCP11L2Q8N4U5 519 aa22.16■■□□□ 1.14
SHANK3-203ENST00000445220 AEBP1Q8IUX7 1158 aa22.15■■□□□ 1.14
SHANK3-203ENST00000445220 HMOX1P09601 288 aa22.15■■□□□ 1.14
SHANK3-203ENST00000445220 ZNF396Q96N95 335 aaPredicted RBP22.15■■□□□ 1.14
SHANK3-203ENST00000445220 CALCOCO1Q9P1Z2 691 aa22.15■■□□□ 1.14
SHANK3-203ENST00000445220 SKIDA1Q1XH10 827 aa22.15■■□□□ 1.14
SHANK3-203ENST00000445220 RALYLQ86SE5 291 aaKnown RBP22.15■■□□□ 1.14
SHANK3-203ENST00000445220 RAPGEF3O95398 923 aa22.14■■□□□ 1.14
SHANK3-203ENST00000445220 MAPK8IP2Q13387 824 aaPredicted RBP22.14■■□□□ 1.13
SHANK3-203ENST00000445220 DMRT2Q9Y5R5 561 aa22.14■■□□□ 1.13
SHANK3-203ENST00000445220 SUPT6HQ7KZ85 1726 aaKnown RBP22.14■■□□□ 1.13
SHANK3-203ENST00000445220 DAPK1P53355 1430 aa22.14■■□□□ 1.13
SHANK3-203ENST00000445220 RAPGEF4Q8WZA2 1011 aa22.13■■□□□ 1.13
SHANK3-203ENST00000445220 OFD1O75665 1012 aa22.13■■□□□ 1.13
SHANK3-203ENST00000445220 PNISRQ8TF01 805 aaKnown RBP22.13■■□□□ 1.13
SHANK3-203ENST00000445220 ERICH2A1L162 156 aa22.12■■□□□ 1.13
SHANK3-203ENST00000445220 KRT85P78386 507 aa22.12■■□□□ 1.13
SHANK3-203ENST00000445220 GOLGA6L7A0A1B0GV03 622 aa22.12■■□□□ 1.13
SHANK3-203ENST00000445220 PLCD4Q9BRC7 762 aa22.12■■□□□ 1.13
SHANK3-203ENST00000445220 SERPINC1P01008 464 aa22.12■■□□□ 1.13
SHANK3-203ENST00000445220 UBXN4Q92575 508 aa22.11■■□□□ 1.13
SHANK3-203ENST00000445220 KIF2AO00139 706 aaPredicted RBP22.11■■□□□ 1.13
SHANK3-203ENST00000445220 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
SHANK3-203ENST00000445220 GOLGA6L10A6NI86 522 aa22.1■■□□□ 1.13
SHANK3-203ENST00000445220 BCAR3O75815 825 aa22.1■■□□□ 1.13
SHANK3-203ENST00000445220 SLC52A1Q9NWF4 448 aa22.1■■□□□ 1.13
SHANK3-203ENST00000445220 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
SHANK3-203ENST00000445220 GAS2L2Q8NHY3 880 aa22.1■■□□□ 1.13
SHANK3-203ENST00000445220 TMCO3Q6UWJ1 677 aa22.1■■□□□ 1.13
SHANK3-203ENST00000445220 PIP4K2AP48426 406 aaPredicted RBP22.1■■□□□ 1.13
SHANK3-203ENST00000445220 NECTIN2Q92692 538 aa22.1■■□□□ 1.13
SHANK3-203ENST00000445220 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
SHANK3-203ENST00000445220 UBTFL1P0CB47 393 aaPredicted RBP22.09■■□□□ 1.13
SHANK3-203ENST00000445220 STK38Q15208 465 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms