RNA–Protein interactions for RNA: ENST00000444900.1

LINC01553-202, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

TSL 1 (best)

Gene LINC01553, Length 1,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-202ENST00000444900 GRIPAP1Q4V328 841 aa7.48□□□□□ -1.21
LINC01553-202ENST00000444900 PALM3A6NDB9 673 aaPredicted RBP7.47□□□□□ -1.21
LINC01553-202ENST00000444900 SLC4A3P48751 1232 aa7.47□□□□□ -1.21
LINC01553-202ENST00000444900 ALG2Q9H553 416 aa7.47□□□□□ -1.21
LINC01553-202ENST00000444900 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
LINC01553-202ENST00000444900 TFIP11Q9UBB9 837 aaKnown RBP7.47□□□□□ -1.21
LINC01553-202ENST00000444900 CFHP08603 1231 aa7.46□□□□□ -1.21
LINC01553-202ENST00000444900 PRR7Q8TB68 274 aa7.46□□□□□ -1.21
LINC01553-202ENST00000444900 MTMR7Q9Y216 660 aa7.46□□□□□ -1.21
LINC01553-202ENST00000444900 MFAP1P55081 439 aaKnown RBP7.45□□□□□ -1.22
LINC01553-202ENST00000444900 PER1O15534 1290 aaPredicted RBP7.45□□□□□ -1.22
LINC01553-202ENST00000444900 ATP6V1AP38606 617 aa7.45□□□□□ -1.22
LINC01553-202ENST00000444900 SRPK2P78362 688 aaKnown RBP7.44□□□□□ -1.22
LINC01553-202ENST00000444900 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
LINC01553-202ENST00000444900 ZNF787Q6DD87 383 aa7.43□□□□□ -1.22
LINC01553-202ENST00000444900 SLF2Q8IX21 1173 aa7.43□□□□□ -1.22
LINC01553-202ENST00000444900 RGS22Q8NE09 1264 aa7.43□□□□□ -1.22
LINC01553-202ENST00000444900 PUS10Q3MIT2 529 aaKnown RBP7.43□□□□□ -1.22
LINC01553-202ENST00000444900 FOXD4L5Q5VV16 416 aaPredicted RBP7.43□□□□□ -1.22
LINC01553-202ENST00000444900 FOXD4L4Q8WXT5 416 aaPredicted RBP7.43□□□□□ -1.22
LINC01553-202ENST00000444900 ZNF516Q92618 1163 aa7.43□□□□□ -1.22
LINC01553-202ENST00000444900 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
LINC01553-202ENST00000444900 GGCXP38435 758 aa7.42□□□□□ -1.22
LINC01553-202ENST00000444900 PDZRN3Q9UPQ7 1066 aa7.42□□□□□ -1.22
LINC01553-202ENST00000444900 BRD1O95696 1058 aa7.41□□□□□ -1.22
LINC01553-202ENST00000444900 APLP1P51693 650 aa7.41□□□□□ -1.22
LINC01553-202ENST00000444900 TBC1D9Q6ZT07 1266 aa7.41□□□□□ -1.22
LINC01553-202ENST00000444900 PNMA1Q8ND90 353 aa7.41□□□□□ -1.22
LINC01553-202ENST00000444900 USTQ9Y2C2 406 aa7.41□□□□□ -1.22
LINC01553-202ENST00000444900 KCNA1Q09470 495 aa7.39□□□□□ -1.23
LINC01553-202ENST00000444900 SLC27A5Q9Y2P5 690 aa7.39□□□□□ -1.23
LINC01553-202ENST00000444900 PATL2C9JE40 543 aaKnown RBP7.38□□□□□ -1.23
LINC01553-202ENST00000444900 SOX11P35716 441 aa7.38□□□□□ -1.23
LINC01553-202ENST00000444900 EIF4G2P78344 907 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC01553-202ENST00000444900 KMT5BQ4FZB7 885 aa7.38□□□□□ -1.23
LINC01553-202ENST00000444900 RETREG3Q86VR2 466 aa7.38□□□□□ -1.23
LINC01553-202ENST00000444900 ZNF428Q96B54 188 aa7.38□□□□□ -1.23
LINC01553-202ENST00000444900 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
LINC01553-202ENST00000444900 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
LINC01553-202ENST00000444900 NKX2-3Q8TAU0 364 aa7.38□□□□□ -1.23
LINC01553-202ENST00000444900 VRTNQ9H8Y1 702 aa7.38□□□□□ -1.23
LINC01553-202ENST00000444900 MORN1Q5T089 497 aa7.37□□□□□ -1.23
LINC01553-202ENST00000444900 IVNS1ABPQ9Y6Y0 642 aa7.37□□□□□ -1.23
LINC01553-202ENST00000444900 ZNF775Q96BV0 537 aaPredicted RBP7.36□□□□□ -1.23
LINC01553-202ENST00000444900 ATG7O95352 703 aa7.36□□□□□ -1.23
LINC01553-202ENST00000444900 ATP9BO43861 1147 aa7.35□□□□□ -1.23
LINC01553-202ENST00000444900 Q3C1V9 767 aa7.35□□□□□ -1.23
LINC01553-202ENST00000444900 TMEM88BA6NKF7 163 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 PIK3CDO00329 1044 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 FBXO45P0C2W1 286 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 COPS2P61201 443 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 NR1H3Q13133 447 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 BLOC1S3Q6QNY0 202 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 LYPD8Q6UX82 237 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 RNF19BQ6ZMZ0 732 aa7.34□□□□□ -1.23
LINC01553-202ENST00000444900 ACTN4O43707 911 aaKnown RBP7.33□□□□□ -1.24
LINC01553-202ENST00000444900 ZPR1O75312 459 aa7.33□□□□□ -1.24
LINC01553-202ENST00000444900 DESI1Q6ICB0 168 aa7.33□□□□□ -1.24
LINC01553-202ENST00000444900 PRR14Q9BWN1 585 aa7.33□□□□□ -1.24
LINC01553-202ENST00000444900 ZBBXA8MT70 800 aa7.32□□□□□ -1.24
LINC01553-202ENST00000444900 USB1Q9BQ65 265 aaKnown RBP7.32□□□□□ -1.24
LINC01553-202ENST00000444900 SKIP12755 728 aa7.31□□□□□ -1.24
LINC01553-202ENST00000444900 CTHP32929 405 aa7.31□□□□□ -1.24
LINC01553-202ENST00000444900 KANK4Q5T7N3 995 aaPredicted RBP7.31□□□□□ -1.24
LINC01553-202ENST00000444900 DEPDC4Q8N2C3 294 aa7.31□□□□□ -1.24
LINC01553-202ENST00000444900 MAP10Q9P2G4 905 aa7.31□□□□□ -1.24
LINC01553-202ENST00000444900 FKBPLQ9UIM3 349 aa7.31□□□□□ -1.24
LINC01553-202ENST00000444900 CCDC27Q2M243 656 aa7.31□□□□□ -1.24
LINC01553-202ENST00000444900 DGAT1O75907 488 aa7.3□□□□□ -1.24
LINC01553-202ENST00000444900 SLC19A1P41440 591 aa7.3□□□□□ -1.24
LINC01553-202ENST00000444900 TRIM67Q6ZTA4 783 aa7.3□□□□□ -1.24
LINC01553-202ENST00000444900 PKDCCQ504Y2 493 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 SCUBE3Q8IX30 993 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 PRR20EP86478 221 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 PRR20CP86479 221 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 PRR20DP86480 221 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 PRR20BP86481 221 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 PRR20AP86496 221 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 TMEM164Q5U3C3 297 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 BRICD5Q6PL45 260 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 PCDHB3Q9Y5E6 796 aa7.29□□□□□ -1.24
LINC01553-202ENST00000444900 USP17L3A6NCW0 530 aa7.28□□□□□ -1.24
LINC01553-202ENST00000444900 USP17L4A6NCW7 530 aa7.28□□□□□ -1.24
LINC01553-202ENST00000444900 RNF223E7ERA6 249 aa7.28□□□□□ -1.24
LINC01553-202ENST00000444900 MYT1Q01538 1121 aa7.28□□□□□ -1.24
LINC01553-202ENST00000444900 USP17L2Q6R6M4 530 aa7.28□□□□□ -1.24
LINC01553-202ENST00000444900 USP17L1Q7RTZ2 530 aa7.28□□□□□ -1.24
LINC01553-202ENST00000444900 ZMIZ1Q9ULJ6 1067 aa7.28□□□□□ -1.24
LINC01553-202ENST00000444900 NOVA2Q9UNW9 492 aaKnown RBP7.28□□□□□ -1.24
LINC01553-202ENST00000444900 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
LINC01553-202ENST00000444900 SPRYD7Q5W111 196 aa7.27□□□□□ -1.25
LINC01553-202ENST00000444900 SND1Q7KZF4 910 aaKnown RBP eCLIP7.27□□□□□ -1.25
LINC01553-202ENST00000444900 ZNF598Q86UK7 904 aaKnown RBP7.27□□□□□ -1.25
LINC01553-202ENST00000444900 FAM174AQ8TBP5 190 aa7.27□□□□□ -1.25
LINC01553-202ENST00000444900 FMNL1O95466 1100 aaPredicted RBP7.27□□□□□ -1.25
LINC01553-202ENST00000444900 F12P00748 615 aaPredicted RBP7.27□□□□□ -1.25
LINC01553-202ENST00000444900 MKRN1Q9UHC7 482 aaKnown RBP7.27□□□□□ -1.25
LINC01553-202ENST00000444900 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
LINC01553-202ENST00000444900 ANKLE1Q8NAG6 615 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms