RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
CASP4-203ENST00000444739 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.41
CASP4-203ENST00000444739 AK9Q5TCS8 1911 aa12.51□□□□□ -0.41
CASP4-203ENST00000444739 MTHFSP49914 203 aa12.51□□□□□ -0.41
CASP4-203ENST00000444739 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
CASP4-203ENST00000444739 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
CASP4-203ENST00000444739 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
CASP4-203ENST00000444739 INO80Q9ULG1 1556 aaPredicted RBP12.5□□□□□ -0.41
CASP4-203ENST00000444739 NOS1P29475 1434 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 BMP2KLQ5H9B9 411 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 PRDM4Q9UKN5 801 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
CASP4-203ENST00000444739 ZNF445P59923 1031 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
CASP4-203ENST00000444739 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
CASP4-203ENST00000444739 ABCC1P33527 1531 aa12.49□□□□□ -0.41
CASP4-203ENST00000444739 RBM10P98175 930 aaKnown RBP12.49□□□□□ -0.41
CASP4-203ENST00000444739 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
CASP4-203ENST00000444739 GAS2L2Q8NHY3 880 aa12.49□□□□□ -0.41
CASP4-203ENST00000444739 MAP7D2Q96T17 732 aa12.49□□□□□ -0.41
CASP4-203ENST00000444739 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
CASP4-203ENST00000444739 CHD1LQ86WJ1 897 aa12.49□□□□□ -0.41
CASP4-203ENST00000444739 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
CASP4-203ENST00000444739 NOB1Q9ULX3 412 aaKnown RBP12.49□□□□□ -0.41
CASP4-203ENST00000444739 ADGRF5Q8IZF2 1346 aa12.48□□□□□ -0.41
CASP4-203ENST00000444739 QRICH2Q9H0J4 1663 aa12.48□□□□□ -0.41
CASP4-203ENST00000444739 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
CASP4-203ENST00000444739 KIF1BO60333 1816 aa12.48□□□□□ -0.41
CASP4-203ENST00000444739 PPRC1Q5VV67 1664 aaKnown RBP12.48□□□□□ -0.41
CASP4-203ENST00000444739 VWDEQ8N2E2 1590 aa12.48□□□□□ -0.41
CASP4-203ENST00000444739 NRXN1Q9ULB1 1477 aa12.48□□□□□ -0.41
CASP4-203ENST00000444739 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
CASP4-203ENST00000444739 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
CASP4-203ENST00000444739 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
CASP4-203ENST00000444739 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
CASP4-203ENST00000444739 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
CASP4-203ENST00000444739 TRAPPC8Q9Y2L5 1435 aa12.47□□□□□ -0.41
CASP4-203ENST00000444739 ABCC11Q96J66 1382 aa12.47□□□□□ -0.41
CASP4-203ENST00000444739 SLC12A5Q9H2X9 1139 aa12.47□□□□□ -0.41
CASP4-203ENST00000444739 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
CASP4-203ENST00000444739 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
CASP4-203ENST00000444739 MROH2AA6NES4 1674 aa12.46□□□□□ -0.41
CASP4-203ENST00000444739 SETBP1Q9Y6X0 1596 aa12.46□□□□□ -0.41
CASP4-203ENST00000444739 KIF16BQ96L93 1317 aa12.46□□□□□ -0.41
CASP4-203ENST00000444739 U2AF1L5P0DN76 240 aaPredicted RBP12.46□□□□□ -0.42
CASP4-203ENST00000444739 U2AF1Q01081 240 aaKnown RBP eCLIP12.46□□□□□ -0.42
CASP4-203ENST00000444739 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.42
CASP4-203ENST00000444739 FAM13BQ9NYF5 915 aa12.46□□□□□ -0.42
CASP4-203ENST00000444739 PLCH2O75038 1416 aa12.45□□□□□ -0.42
CASP4-203ENST00000444739 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
CASP4-203ENST00000444739 MED14O60244 1454 aa12.45□□□□□ -0.42
CASP4-203ENST00000444739 ZFYVE16Q7Z3T8 1539 aa12.45□□□□□ -0.42
CASP4-203ENST00000444739 ZSCAN23Q3MJ62 389 aa12.45□□□□□ -0.42
CASP4-203ENST00000444739 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
CASP4-203ENST00000444739 REREQ9P2R6 1566 aa12.44□□□□□ -0.42
CASP4-203ENST00000444739 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
CASP4-203ENST00000444739 LMBRD1Q9NUN5 540 aa12.44□□□□□ -0.42
CASP4-203ENST00000444739 UQCRHLA0A096LP55 91 aa12.43□□□□□ -0.42
CASP4-203ENST00000444739 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
CASP4-203ENST00000444739 UQCRHP07919 91 aa12.43□□□□□ -0.42
CASP4-203ENST00000444739 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
CASP4-203ENST00000444739 CAVIN1Q6NZI2 390 aaKnown RBP12.43□□□□□ -0.42
CASP4-203ENST00000444739 IL16Q14005 1332 aa12.43□□□□□ -0.42
CASP4-203ENST00000444739 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
CASP4-203ENST00000444739 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
CASP4-203ENST00000444739 TMPOP42166 694 aaKnown RBP12.43□□□□□ -0.42
CASP4-203ENST00000444739 MCTP1Q6DN14 999 aa12.43□□□□□ -0.42
CASP4-203ENST00000444739 ZKSCAN5Q9Y2L8 839 aa12.42□□□□□ -0.42
CASP4-203ENST00000444739 NSD2O96028 1365 aa12.42□□□□□ -0.42
CASP4-203ENST00000444739 ANKRD45Q5TZF3 282 aa12.42□□□□□ -0.42
CASP4-203ENST00000444739 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
CASP4-203ENST00000444739 DYNC1I1O14576 645 aa12.41□□□□□ -0.42
CASP4-203ENST00000444739 PRIM1P49642 420 aaKnown RBP12.41□□□□□ -0.42
CASP4-203ENST00000444739 NUCB2P80303 420 aa12.41□□□□□ -0.42
CASP4-203ENST00000444739 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
CASP4-203ENST00000444739 SPAG9O60271 1321 aaKnown RBP12.41□□□□□ -0.42
CASP4-203ENST00000444739 COL3A1P02461 1466 aaPredicted RBP12.41□□□□□ -0.42
CASP4-203ENST00000444739 MCM5P33992 734 aa12.4□□□□□ -0.42
CASP4-203ENST00000444739 MTERF4Q7Z6M4 381 aaKnown RBP12.4□□□□□ -0.42
CASP4-203ENST00000444739 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
CASP4-203ENST00000444739 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
CASP4-203ENST00000444739 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
CASP4-203ENST00000444739 MROH1Q8NDA8 1641 aa12.4□□□□□ -0.43
CASP4-203ENST00000444739 ADGRB1O14514 1584 aa12.4□□□□□ -0.43
CASP4-203ENST00000444739 CDC45O75419 566 aa12.39□□□□□ -0.43
CASP4-203ENST00000444739 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
CASP4-203ENST00000444739 RABEP1Q15276 862 aa12.39□□□□□ -0.43
CASP4-203ENST00000444739 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
CASP4-203ENST00000444739 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
CASP4-203ENST00000444739 TRAK1Q9UPV9 953 aa12.39□□□□□ -0.43
CASP4-203ENST00000444739 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
CASP4-203ENST00000444739 PKP1Q13835 747 aa12.38□□□□□ -0.43
CASP4-203ENST00000444739 SASS6Q6UVJ0 657 aa12.38□□□□□ -0.43
CASP4-203ENST00000444739 PIK3R4Q99570 1358 aa12.38□□□□□ -0.43
CASP4-203ENST00000444739 ADGRB3O60242 1522 aa12.38□□□□□ -0.43
CASP4-203ENST00000444739 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
CASP4-203ENST00000444739 PPLO60437 1756 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms