RNA–Protein interactions for RNA: ENST00000442747.5

SHISA5-208, Transcript of shisa family member 5, humanhuman

TSL 2 BASIC

Gene SHISA5, Length 2,250 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-208ENST00000442747 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 1
SHISA5-208ENST00000442747 CABP1Q9NZU7 370 aa21.29■■□□□ 1
SHISA5-208ENST00000442747 NRXN3Q9Y4C0 1643 aa21.28■■□□□ 1
SHISA5-208ENST00000442747 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
SHISA5-208ENST00000442747 AMOTL2Q9Y2J4 779 aa21.25■□□□□ 0.99
SHISA5-208ENST00000442747 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
SHISA5-208ENST00000442747 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
SHISA5-208ENST00000442747 HDGFL2Q7Z4V5 671 aaPredicted RBP21.25■□□□□ 0.99
SHISA5-208ENST00000442747 KDM2BQ8NHM5 1336 aa21.24■□□□□ 0.99
SHISA5-208ENST00000442747 PTPRUQ92729 1446 aa21.23■□□□□ 0.99
SHISA5-208ENST00000442747 DLC1Q96QB1 1528 aa21.23■□□□□ 0.99
SHISA5-208ENST00000442747 KCNA6P17658 529 aa21.22■□□□□ 0.99
SHISA5-208ENST00000442747 U2SURPO15042 1029 aaKnown RBP21.22■□□□□ 0.99
SHISA5-208ENST00000442747 ERICH6Q7L0X2 663 aa21.22■□□□□ 0.99
SHISA5-208ENST00000442747 PDE4AP27815 886 aa21.21■□□□□ 0.99
SHISA5-208ENST00000442747 WDR63Q8IWG1 891 aa21.21■□□□□ 0.99
SHISA5-208ENST00000442747 PIK3R4Q99570 1358 aa21.2■□□□□ 0.98
SHISA5-208ENST00000442747 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
SHISA5-208ENST00000442747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.2■□□□□ 0.98
SHISA5-208ENST00000442747 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.98
SHISA5-208ENST00000442747 DIP2AQ14689 1571 aa21.2■□□□□ 0.98
SHISA5-208ENST00000442747 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
SHISA5-208ENST00000442747 MS4A1P11836 297 aa21.19■□□□□ 0.98
SHISA5-208ENST00000442747 CENPQQ7L2Z9 268 aaPredicted RBP21.18■□□□□ 0.98
SHISA5-208ENST00000442747 RBM33Q96EV2 1170 aaKnown RBP21.18■□□□□ 0.98
SHISA5-208ENST00000442747 FBLN1P23142 703 aa21.17■□□□□ 0.98
SHISA5-208ENST00000442747 ANP32AP39687 249 aaKnown RBP21.17■□□□□ 0.98
SHISA5-208ENST00000442747 PLEKHF1Q96S99 279 aa21.17■□□□□ 0.98
SHISA5-208ENST00000442747 BACH2Q9BYV9 841 aa21.17■□□□□ 0.98
SHISA5-208ENST00000442747 ADGRB2O60241 1585 aa21.16■□□□□ 0.98
SHISA5-208ENST00000442747 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
SHISA5-208ENST00000442747 RARSP54136 660 aaKnown RBP21.16■□□□□ 0.98
SHISA5-208ENST00000442747 PANK1Q8TE04 598 aa21.15■□□□□ 0.98
SHISA5-208ENST00000442747 FRAT1Q92837 279 aaPredicted RBP21.15■□□□□ 0.98
SHISA5-208ENST00000442747 WASLO00401 505 aaPredicted RBP21.15■□□□□ 0.98
SHISA5-208ENST00000442747 ROBO2Q9HCK4 1378 aa21.14■□□□□ 0.97
SHISA5-208ENST00000442747 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.97
SHISA5-208ENST00000442747 KIF20BQ96Q89 1820 aa21.14■□□□□ 0.97
SHISA5-208ENST00000442747 PAK3O75914 559 aaPredicted RBP21.13■□□□□ 0.97
SHISA5-208ENST00000442747 PDE3AQ14432 1141 aa21.13■□□□□ 0.97
SHISA5-208ENST00000442747 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
SHISA5-208ENST00000442747 BCL2L13Q9BXK5 485 aa21.13■□□□□ 0.97
SHISA5-208ENST00000442747 COG6Q9Y2V7 657 aa21.13■□□□□ 0.97
SHISA5-208ENST00000442747 NOP58Q9Y2X3 529 aaKnown RBP21.13■□□□□ 0.97
SHISA5-208ENST00000442747 ATP7BP35670 1465 aa21.13■□□□□ 0.97
SHISA5-208ENST00000442747 DIAPH1O60610 1272 aaKnown RBP21.12■□□□□ 0.97
SHISA5-208ENST00000442747 TMPOP42166 694 aaKnown RBP21.12■□□□□ 0.97
SHISA5-208ENST00000442747 IPO9Q96P70 1041 aaKnown RBP21.12■□□□□ 0.97
SHISA5-208ENST00000442747 NCBP3Q53F19 620 aaKnown RBP21.12■□□□□ 0.97
SHISA5-208ENST00000442747 MYH16Q9H6N6 1097 aa21.12■□□□□ 0.97
SHISA5-208ENST00000442747 PNPLA6Q8IY17 1366 aa21.11■□□□□ 0.97
SHISA5-208ENST00000442747 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
SHISA5-208ENST00000442747 PRKCSHP14314 528 aaPredicted RBP21.11■□□□□ 0.97
SHISA5-208ENST00000442747 TRIM35Q9UPQ4 493 aa21.11■□□□□ 0.97
SHISA5-208ENST00000442747 TNNQ9UQP3 1299 aa21.11■□□□□ 0.97
SHISA5-208ENST00000442747 PPIP5K1Q6PFW1 1433 aa21.11■□□□□ 0.97
SHISA5-208ENST00000442747 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
SHISA5-208ENST00000442747 TSR2Q969E8 191 aaKnown RBP21.1■□□□□ 0.97
SHISA5-208ENST00000442747 POLKQ9UBT6 870 aa21.09■□□□□ 0.97
SHISA5-208ENST00000442747 SIRT1Q96EB6 747 aa21.09■□□□□ 0.97
SHISA5-208ENST00000442747 CHD2O14647 1828 aaKnown RBP21.09■□□□□ 0.97
SHISA5-208ENST00000442747 TECPR2O15040 1411 aa21.09■□□□□ 0.97
SHISA5-208ENST00000442747 NUDT16Q96DE0 195 aaKnown RBP21.08■□□□□ 0.97
SHISA5-208ENST00000442747 ZRANB1Q9UGI0 708 aa21.08■□□□□ 0.97
SHISA5-208ENST00000442747 IGHDP01880 384 aa21.08■□□□□ 0.96
SHISA5-208ENST00000442747 NME9Q86XW9 330 aa21.08■□□□□ 0.96
SHISA5-208ENST00000442747 CPSF1Q10570 1443 aaKnown RBP21.08■□□□□ 0.96
SHISA5-208ENST00000442747 TMEM94Q12767 1356 aa21.07■□□□□ 0.96
SHISA5-208ENST00000442747 STRCP1A6NGW2 1772 aa21.07■□□□□ 0.96
SHISA5-208ENST00000442747 RLBP1P12271 317 aa21.06■□□□□ 0.96
SHISA5-208ENST00000442747 RIPK4P57078 832 aa21.06■□□□□ 0.96
SHISA5-208ENST00000442747 PTCH1Q13635 1447 aa21.06■□□□□ 0.96
SHISA5-208ENST00000442747 FAM135BQ49AJ0 1406 aa21.06■□□□□ 0.96
SHISA5-208ENST00000442747 C14orf37Q86TY3 774 aa21.06■□□□□ 0.96
SHISA5-208ENST00000442747 CLUAP1Q96AJ1 413 aa21.06■□□□□ 0.96
SHISA5-208ENST00000442747 XRN1Q8IZH2 1706 aaKnown RBP21.05■□□□□ 0.96
SHISA5-208ENST00000442747 NWD1Q149M9 1564 aa21.05■□□□□ 0.96
SHISA5-208ENST00000442747 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
SHISA5-208ENST00000442747 KNDC1Q76NI1 1749 aa21.04■□□□□ 0.96
SHISA5-208ENST00000442747 RGS3P49796 1198 aa21.04■□□□□ 0.96
SHISA5-208ENST00000442747 EMILIN1Q9Y6C2 1016 aa21.04■□□□□ 0.96
SHISA5-208ENST00000442747 CCDC61Q9Y6R9 512 aa21.04■□□□□ 0.96
SHISA5-208ENST00000442747 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
SHISA5-208ENST00000442747 LRRC7Q96NW7 1537 aa21.03■□□□□ 0.96
SHISA5-208ENST00000442747 EXOSC9Q06265 439 aaKnown RBP21.03■□□□□ 0.96
SHISA5-208ENST00000442747 ZBTB47Q9UFB7 747 aaPredicted RBP21.03■□□□□ 0.96
SHISA5-208ENST00000442747 CPS1P31327 1500 aa21.02■□□□□ 0.96
SHISA5-208ENST00000442747 PRR36Q9H6K5 1346 aa21.02■□□□□ 0.96
SHISA5-208ENST00000442747 PRKAR2BP31323 418 aa21.01■□□□□ 0.95
SHISA5-208ENST00000442747 RSPH6AQ9H0K4 717 aa21.01■□□□□ 0.95
SHISA5-208ENST00000442747 FCHSD2O94868 740 aa21.01■□□□□ 0.95
SHISA5-208ENST00000442747 MAP2P11137 1827 aaKnown RBP21■□□□□ 0.95
SHISA5-208ENST00000442747 CDC42BPGQ6DT37 1551 aa21■□□□□ 0.95
SHISA5-208ENST00000442747 HMOX1P09601 288 aa21■□□□□ 0.95
SHISA5-208ENST00000442747 PNNQ9H307 717 aaKnown RBP20.99■□□□□ 0.95
SHISA5-208ENST00000442747 C19orf44Q9H6X5 657 aa20.99■□□□□ 0.95
SHISA5-208ENST00000442747 PHACTR3Q96KR7 559 aa20.98■□□□□ 0.95
SHISA5-208ENST00000442747 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
SHISA5-208ENST00000442747 RRS1Q15050 365 aaKnown RBP20.97■□□□□ 0.95
SHISA5-208ENST00000442747 COG3Q96JB2 828 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms