RNA–Protein interactions for RNA: ENST00000442457.1

SLC6A8-205, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-205ENST00000442457 PSME1Q06323 249 aa17.5■□□□□ 0.39
SLC6A8-205ENST00000442457 SLIT2O94813 1529 aa17.5■□□□□ 0.39
SLC6A8-205ENST00000442457 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
SLC6A8-205ENST00000442457 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
SLC6A8-205ENST00000442457 USP21Q9UK80 565 aa17.49■□□□□ 0.39
SLC6A8-205ENST00000442457 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
SLC6A8-205ENST00000442457 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
SLC6A8-205ENST00000442457 RXRBP28702 533 aa17.48■□□□□ 0.39
SLC6A8-205ENST00000442457 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
SLC6A8-205ENST00000442457 CDK19Q9BWU1 502 aa17.48■□□□□ 0.39
SLC6A8-205ENST00000442457 NGDNQ8NEJ9 315 aaKnown RBP17.47■□□□□ 0.39
SLC6A8-205ENST00000442457 CABLES1Q8TDN4 633 aa17.47■□□□□ 0.39
SLC6A8-205ENST00000442457 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
SLC6A8-205ENST00000442457 BRWD3Q6RI45 1802 aa17.46■□□□□ 0.39
SLC6A8-205ENST00000442457 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
SLC6A8-205ENST00000442457 NBPF8Q3BBV2 869 aa17.45■□□□□ 0.38
SLC6A8-205ENST00000442457 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
SLC6A8-205ENST00000442457 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-205ENST00000442457 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
SLC6A8-205ENST00000442457 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
SLC6A8-205ENST00000442457 TRPC5Q9UL62 973 aaPredicted RBP17.43■□□□□ 0.38
SLC6A8-205ENST00000442457 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
SLC6A8-205ENST00000442457 ACEP12821 1306 aa17.42■□□□□ 0.38
SLC6A8-205ENST00000442457 LMO7Q8WWI1 1683 aa17.41■□□□□ 0.38
SLC6A8-205ENST00000442457 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
SLC6A8-205ENST00000442457 USP6P35125 1406 aa17.39■□□□□ 0.38
SLC6A8-205ENST00000442457 EP400Q96L91 3159 aa17.39■□□□□ 0.37
SLC6A8-205ENST00000442457 EVC2Q86UK5 1308 aa17.39■□□□□ 0.37
SLC6A8-205ENST00000442457 SBNO2Q9Y2G9 1366 aa17.39■□□□□ 0.37
SLC6A8-205ENST00000442457 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
SLC6A8-205ENST00000442457 USP54Q70EL1 1684 aa17.38■□□□□ 0.37
SLC6A8-205ENST00000442457 SLIT3O75094 1523 aa17.37■□□□□ 0.37
SLC6A8-205ENST00000442457 THSD7AQ9UPZ6 1657 aa17.37■□□□□ 0.37
SLC6A8-205ENST00000442457 WNK3Q9BYP7 1800 aa17.37■□□□□ 0.37
SLC6A8-205ENST00000442457 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
SLC6A8-205ENST00000442457 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
SLC6A8-205ENST00000442457 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
SLC6A8-205ENST00000442457 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
SLC6A8-205ENST00000442457 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
SLC6A8-205ENST00000442457 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
SLC6A8-205ENST00000442457 LTN1O94822 1766 aa17.33■□□□□ 0.36
SLC6A8-205ENST00000442457 MYOM1P52179 1685 aa17.32■□□□□ 0.36
SLC6A8-205ENST00000442457 USP19O94966 1318 aa17.32■□□□□ 0.36
SLC6A8-205ENST00000442457 PCGF6Q9BYE7 350 aa17.32■□□□□ 0.36
SLC6A8-205ENST00000442457 RNF216Q9NWF9 866 aaPredicted RBP17.32■□□□□ 0.36
SLC6A8-205ENST00000442457 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
SLC6A8-205ENST00000442457 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
SLC6A8-205ENST00000442457 UPF1Q92900 1129 aaKnown RBP eCLIP17.31■□□□□ 0.36
SLC6A8-205ENST00000442457 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
SLC6A8-205ENST00000442457 CABP1Q9NZU7 370 aa17.31■□□□□ 0.36
SLC6A8-205ENST00000442457 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
SLC6A8-205ENST00000442457 CD163L1Q9NR16 1453 aa17.31■□□□□ 0.36
SLC6A8-205ENST00000442457 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
SLC6A8-205ENST00000442457 ABTB2Q8N961 1025 aa17.3■□□□□ 0.36
SLC6A8-205ENST00000442457 BTG4Q9NY30 223 aa17.3■□□□□ 0.36
SLC6A8-205ENST00000442457 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
SLC6A8-205ENST00000442457 VPS72Q15906 364 aa17.29■□□□□ 0.36
SLC6A8-205ENST00000442457 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
SLC6A8-205ENST00000442457 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
SLC6A8-205ENST00000442457 COL18A1P39060 1754 aa17.28■□□□□ 0.36
SLC6A8-205ENST00000442457 NFAT5O94916 1531 aa17.28■□□□□ 0.36
SLC6A8-205ENST00000442457 USP47Q96K76 1375 aa17.28■□□□□ 0.36
SLC6A8-205ENST00000442457 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.36
SLC6A8-205ENST00000442457 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.36
SLC6A8-205ENST00000442457 KIF20BQ96Q89 1820 aa17.27■□□□□ 0.36
SLC6A8-205ENST00000442457 CHRNA2Q15822 529 aa17.27■□□□□ 0.36
SLC6A8-205ENST00000442457 KTN1Q86UP2 1357 aaKnown RBP17.27■□□□□ 0.35
SLC6A8-205ENST00000442457 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
SLC6A8-205ENST00000442457 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
SLC6A8-205ENST00000442457 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-205ENST00000442457 CPDO75976 1380 aa17.26■□□□□ 0.35
SLC6A8-205ENST00000442457 PARP4Q9UKK3 1724 aaKnown RBP17.25■□□□□ 0.35
SLC6A8-205ENST00000442457 A0A0G2JS52 829 aa17.25■□□□□ 0.35
SLC6A8-205ENST00000442457 MYT1Q01538 1121 aa17.25■□□□□ 0.35
SLC6A8-205ENST00000442457 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
SLC6A8-205ENST00000442457 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
SLC6A8-205ENST00000442457 ABCC6O95255 1503 aa17.23■□□□□ 0.35
SLC6A8-205ENST00000442457 FAM98CQ17RN3 349 aaKnown RBP17.22■□□□□ 0.35
SLC6A8-205ENST00000442457 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
SLC6A8-205ENST00000442457 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
SLC6A8-205ENST00000442457 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
SLC6A8-205ENST00000442457 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.35
SLC6A8-205ENST00000442457 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
SLC6A8-205ENST00000442457 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
SLC6A8-205ENST00000442457 NLRP6P59044 892 aa17.21■□□□□ 0.35
SLC6A8-205ENST00000442457 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
SLC6A8-205ENST00000442457 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.34
SLC6A8-205ENST00000442457 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
SLC6A8-205ENST00000442457 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
SLC6A8-205ENST00000442457 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
SLC6A8-205ENST00000442457 TESK2Q96S53 571 aa17.2■□□□□ 0.34
SLC6A8-205ENST00000442457 GCP02774 474 aa17.19■□□□□ 0.34
SLC6A8-205ENST00000442457 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
SLC6A8-205ENST00000442457 FAM208AQ9UK61 1670 aaKnown RBP17.18■□□□□ 0.34
SLC6A8-205ENST00000442457 SOX12O15370 315 aa17.18■□□□□ 0.34
SLC6A8-205ENST00000442457 OVOS2A0A0J9YW53 1432 aa17.18■□□□□ 0.34
SLC6A8-205ENST00000442457 BLMP54132 1417 aaPredicted RBP17.18■□□□□ 0.34
SLC6A8-205ENST00000442457 OVOS2Q6IE36 1432 aa17.18■□□□□ 0.34
SLC6A8-205ENST00000442457 SPATA31A1Q5TZJ5 1347 aa17.18■□□□□ 0.34
SLC6A8-205ENST00000442457 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms