RNA–Protein interactions for RNA: ENST00000441740.6

MEIS3-202, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MEIS3, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-202ENST00000441740 TNNT2P45379 298 aaPredicted RBP28.85■■■□□ 2.21
MEIS3-202ENST00000441740 CADPS2Q86UW7 1296 aa28.85■■■□□ 2.21
MEIS3-202ENST00000441740 PPP2R1AP30153 589 aa28.84■■■□□ 2.21
MEIS3-202ENST00000441740 ORAI2Q96SN7 254 aa28.84■■■□□ 2.21
MEIS3-202ENST00000441740 MST1RQ04912 1400 aa28.83■■■□□ 2.21
MEIS3-202ENST00000441740 BRD4O60885 1362 aaPredicted RBP28.83■■■□□ 2.21
MEIS3-202ENST00000441740 NME9Q86XW9 330 aa28.82■■■□□ 2.2
MEIS3-202ENST00000441740 TTC21BQ7Z4L5 1316 aa28.81■■■□□ 2.2
MEIS3-202ENST00000441740 KIF1AQ12756 1690 aa28.8■■■□□ 2.2
MEIS3-202ENST00000441740 ZRANB1Q9UGI0 708 aa28.76■■■□□ 2.19
MEIS3-202ENST00000441740 SSH2Q76I76 1423 aa28.76■■■□□ 2.19
MEIS3-202ENST00000441740 LTBP4Q8N2S1 1624 aa28.75■■■□□ 2.19
MEIS3-202ENST00000441740 PSME1Q06323 249 aa28.75■■■□□ 2.19
MEIS3-202ENST00000441740 FAM9BQ8IZU0 186 aa28.75■■■□□ 2.19
MEIS3-202ENST00000441740 TTC21AQ8NDW8 1320 aa28.74■■■□□ 2.19
MEIS3-202ENST00000441740 FOXO3O43524 673 aa28.74■■■□□ 2.19
MEIS3-202ENST00000441740 PAK3O75914 559 aaPredicted RBP28.73■■■□□ 2.19
MEIS3-202ENST00000441740 COG3Q96JB2 828 aa28.73■■■□□ 2.19
MEIS3-202ENST00000441740 PIK3C2AO00443 1686 aa28.72■■■□□ 2.19
MEIS3-202ENST00000441740 XPCQ01831 940 aaPredicted RBP28.7■■■□□ 2.18
MEIS3-202ENST00000441740 MAP2P11137 1827 aaKnown RBP28.67■■■□□ 2.18
MEIS3-202ENST00000441740 SLAIN2Q9P270 581 aa28.67■■■□□ 2.18
MEIS3-202ENST00000441740 OVOS2A0A0J9YW53 1432 aa28.66■■■□□ 2.18
MEIS3-202ENST00000441740 OVOS2Q6IE36 1432 aa28.66■■■□□ 2.18
MEIS3-202ENST00000441740 PNISRQ8TF01 805 aaKnown RBP28.66■■■□□ 2.18
MEIS3-202ENST00000441740 MTHFSP49914 203 aa28.65■■■□□ 2.18
MEIS3-202ENST00000441740 ABTB2Q8N961 1025 aa28.65■■■□□ 2.18
MEIS3-202ENST00000441740 NUTM2GQ5VZR2 741 aa28.64■■■□□ 2.18
MEIS3-202ENST00000441740 TRPM3Q9HCF6 1732 aaPredicted RBP28.64■■■□□ 2.18
MEIS3-202ENST00000441740 FBLN1P23142 703 aa28.63■■■□□ 2.17
MEIS3-202ENST00000441740 KRT28Q7Z3Y7 464 aa28.63■■■□□ 2.17
MEIS3-202ENST00000441740 DDX17Q92841 729 aaKnown RBP28.63■■■□□ 2.17
MEIS3-202ENST00000441740 NLRP6P59044 892 aa28.62■■■□□ 2.17
MEIS3-202ENST00000441740 BRINP3Q76B58 766 aa28.62■■■□□ 2.17
MEIS3-202ENST00000441740 SCAF1Q9H7N4 1312 aaKnown RBP28.62■■■□□ 2.17
MEIS3-202ENST00000441740 MARF1Q9Y4F3 1742 aaKnown RBP28.62■■■□□ 2.17
MEIS3-202ENST00000441740 NPHP3Q7Z494 1330 aa28.6■■■□□ 2.17
MEIS3-202ENST00000441740 USP31Q70CQ4 1352 aa28.6■■■□□ 2.17
MEIS3-202ENST00000441740 SOX12O15370 315 aa28.6■■■□□ 2.17
MEIS3-202ENST00000441740 USP54Q70EL1 1684 aa28.59■■■□□ 2.17
MEIS3-202ENST00000441740 LMOD2Q6P5Q4 547 aa28.59■■■□□ 2.17
MEIS3-202ENST00000441740 CFAP53Q96M91 514 aa28.59■■■□□ 2.17
MEIS3-202ENST00000441740 PPM1GO15355 546 aaPredicted RBP28.58■■■□□ 2.17
MEIS3-202ENST00000441740 WDR43Q15061 677 aaKnown RBP eCLIP28.57■■■□□ 2.16
MEIS3-202ENST00000441740 AATKQ6ZMQ8 1374 aa28.56■■■□□ 2.16
MEIS3-202ENST00000441740 POLKQ9UBT6 870 aa28.56■■■□□ 2.16
MEIS3-202ENST00000441740 RRS1Q15050 365 aaKnown RBP28.55■■■□□ 2.16
MEIS3-202ENST00000441740 EMILIN1Q9Y6C2 1016 aa28.55■■■□□ 2.16
MEIS3-202ENST00000441740 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
MEIS3-202ENST00000441740 ALS2Q96Q42 1657 aa28.54■■■□□ 2.16
MEIS3-202ENST00000441740 PXDNQ92626 1479 aa28.53■■■□□ 2.16
MEIS3-202ENST00000441740 HNRNPUQ00839 825 aaKnown RBP eCLIP28.52■■■□□ 2.16
MEIS3-202ENST00000441740 PLEKHG5O94827 1062 aa28.52■■■□□ 2.16
MEIS3-202ENST00000441740 SMG6Q86US8 1419 aaKnown RBP28.5■■■□□ 2.15
MEIS3-202ENST00000441740 ROBO1Q9Y6N7 1651 aa28.49■■■□□ 2.15
MEIS3-202ENST00000441740 NHSL1Q5SYE7 1610 aa28.49■■■□□ 2.15
MEIS3-202ENST00000441740 ADAMTS8Q9UP79 889 aa28.49■■■□□ 2.15
MEIS3-202ENST00000441740 SBNO1A3KN83 1393 aa28.49■■■□□ 2.15
MEIS3-202ENST00000441740 COL3A1P02461 1466 aaPredicted RBP28.48■■■□□ 2.15
MEIS3-202ENST00000441740 CDK12Q9NYV4 1490 aaPredicted RBP28.48■■■□□ 2.15
MEIS3-202ENST00000441740 TNS3Q68CZ2 1445 aa28.47■■■□□ 2.15
MEIS3-202ENST00000441740 PEAK1Q9H792 1746 aa28.46■■■□□ 2.15
MEIS3-202ENST00000441740 PNPLA6Q8IY17 1366 aa28.45■■■□□ 2.14
MEIS3-202ENST00000441740 LTN1O94822 1766 aa28.45■■■□□ 2.14
MEIS3-202ENST00000441740 MAP3K19Q56UN5 1328 aa28.44■■■□□ 2.14
MEIS3-202ENST00000441740 SENP3-EIF4A1A0A087X0R7 540 aa28.43■■■□□ 2.14
MEIS3-202ENST00000441740 DIAPH1O60610 1272 aaKnown RBP28.43■■■□□ 2.14
MEIS3-202ENST00000441740 SPATA31A3Q5VYP0 1347 aa28.43■■■□□ 2.14
MEIS3-202ENST00000441740 SOS2Q07890 1332 aaPredicted RBP28.42■■■□□ 2.14
MEIS3-202ENST00000441740 NUDCQ9Y266 331 aa28.42■■■□□ 2.14
MEIS3-202ENST00000441740 SLIT3O75094 1523 aa28.41■■■□□ 2.14
MEIS3-202ENST00000441740 NFAT5O94916 1531 aa28.41■■■□□ 2.14
MEIS3-202ENST00000441740 U2SURPO15042 1029 aaKnown RBP28.41■■■□□ 2.14
MEIS3-202ENST00000441740 CENPBP07199 599 aaPredicted RBP28.41■■■□□ 2.14
MEIS3-202ENST00000441740 INSRP06213 1382 aa28.41■■■□□ 2.14
MEIS3-202ENST00000441740 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
MEIS3-202ENST00000441740 KCNH5Q8NCM2 988 aa28.4■■■□□ 2.14
MEIS3-202ENST00000441740 AMPHP49418 695 aa28.39■■■□□ 2.14
MEIS3-202ENST00000441740 USP19O94966 1318 aa28.39■■■□□ 2.14
MEIS3-202ENST00000441740 ARHGEF10O15013 1369 aa28.39■■■□□ 2.14
MEIS3-202ENST00000441740 MED1Q15648 1581 aaPredicted RBP28.39■■■□□ 2.14
MEIS3-202ENST00000441740 TOM1O60784 492 aa28.39■■■□□ 2.13
MEIS3-202ENST00000441740 ZBTB7CA1YPR0 619 aa28.38■■■□□ 2.13
MEIS3-202ENST00000441740 GCP02774 474 aa28.38■■■□□ 2.13
MEIS3-202ENST00000441740 U2AF1L5P0DN76 240 aaPredicted RBP28.38■■■□□ 2.13
MEIS3-202ENST00000441740 U2AF1Q01081 240 aaKnown RBP eCLIP28.38■■■□□ 2.13
MEIS3-202ENST00000441740 PHRF1Q9P1Y6 1649 aaKnown RBP28.38■■■□□ 2.13
MEIS3-202ENST00000441740 FLT4P35916 1363 aa28.37■■■□□ 2.13
MEIS3-202ENST00000441740 PIP4K2BP78356 416 aa28.37■■■□□ 2.13
MEIS3-202ENST00000441740 CCDC146Q8IYE0 955 aa28.37■■■□□ 2.13
MEIS3-202ENST00000441740 HSP90AB2PQ58FF8 381 aa28.35■■■□□ 2.13
MEIS3-202ENST00000441740 UBAP1LF5GYI3 381 aa28.34■■■□□ 2.13
MEIS3-202ENST00000441740 AHDC1Q5TGY3 1603 aaPredicted RBP28.34■■■□□ 2.13
MEIS3-202ENST00000441740 CRYBG1Q9Y4K1 1723 aa28.34■■■□□ 2.13
MEIS3-202ENST00000441740 CABLES1Q8TDN4 633 aa28.34■■■□□ 2.13
MEIS3-202ENST00000441740 IQSEC2Q5JU85 1478 aa28.33■■■□□ 2.13
MEIS3-202ENST00000441740 IL13P35225 146 aa28.32■■■□□ 2.12
MEIS3-202ENST00000441740 CERKQ8TCT0 537 aa28.31■■■□□ 2.12
MEIS3-202ENST00000441740 SALL2Q9Y467 1007 aaPredicted RBP28.31■■■□□ 2.12
MEIS3-202ENST00000441740 KIF24Q5T7B8 1368 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms