RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.92
HDAC9-214ENST00000441542 TMEM57Q8N5G2 664 aa9.27□□□□□ -0.92
HDAC9-214ENST00000441542 UHRF1BP1Q6BDS2 1440 aa9.27□□□□□ -0.93
HDAC9-214ENST00000441542 CSPP1Q1MSJ5 1256 aa9.27□□□□□ -0.93
HDAC9-214ENST00000441542 TRERF1Q96PN7 1200 aa9.27□□□□□ -0.93
HDAC9-214ENST00000441542 NOB1Q9ULX3 412 aaKnown RBP9.27□□□□□ -0.93
HDAC9-214ENST00000441542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC9-214ENST00000441542 POLR1AO95602 1720 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-214ENST00000441542 MAGI2Q86UL8 1455 aa9.27□□□□□ -0.93
HDAC9-214ENST00000441542 TRIM27P14373 513 aa9.27□□□□□ -0.93
HDAC9-214ENST00000441542 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
HDAC9-214ENST00000441542 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-214ENST00000441542 DTNBO60941 627 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 U2AF2P26368 475 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDAC9-214ENST00000441542 CCDC39Q9UFE4 941 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 TICAM2Q86XR7 235 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 SAMD9Q5K651 1589 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 SSH1Q8WYL5 1049 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 STAC3Q96MF2 364 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 TMEM63CQ9P1W3 806 aa9.26□□□□□ -0.93
HDAC9-214ENST00000441542 ZNF500O60304 480 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-214ENST00000441542 GPT2Q8TD30 523 aa9.25□□□□□ -0.93
HDAC9-214ENST00000441542 RTEL1-TNFRSF6BF6WH68 1400 aa9.25□□□□□ -0.93
HDAC9-214ENST00000441542 UHRF1BP1LA0JNW5 1464 aa9.25□□□□□ -0.93
HDAC9-214ENST00000441542 DDIT3P35638 169 aa9.25□□□□□ -0.93
HDAC9-214ENST00000441542 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
HDAC9-214ENST00000441542 USP25Q9UHP3 1055 aa9.25□□□□□ -0.93
HDAC9-214ENST00000441542 PRAG1Q86YV5 1406 aa9.25□□□□□ -0.93
HDAC9-214ENST00000441542 COL17A1Q9UMD9 1497 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-214ENST00000441542 MTERF4Q7Z6M4 381 aaKnown RBP9.24□□□□□ -0.93
HDAC9-214ENST00000441542 CHD1LQ86WJ1 897 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 KIF2CQ99661 725 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 PTMSP20962 102 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 ZNF710Q8N1W2 664 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 SNX21Q969T3 373 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 RUNDC1Q96C34 613 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-214ENST00000441542 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 CFAP44Q96MT7 982 aa9.24□□□□□ -0.93
HDAC9-214ENST00000441542 KIF16BQ96L93 1317 aa9.23□□□□□ -0.93
HDAC9-214ENST00000441542 CHRM1P11229 460 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-214ENST00000441542 RBM25P49756 843 aaKnown RBP9.23□□□□□ -0.93
HDAC9-214ENST00000441542 MTHFSP49914 203 aa9.23□□□□□ -0.93
HDAC9-214ENST00000441542 PDCL2Q8N4E4 241 aa9.23□□□□□ -0.93
HDAC9-214ENST00000441542 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
HDAC9-214ENST00000441542 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
HDAC9-214ENST00000441542 INSRP06213 1382 aa9.23□□□□□ -0.93
HDAC9-214ENST00000441542 ABCC10Q5T3U5 1492 aa9.23□□□□□ -0.93
HDAC9-214ENST00000441542 DDX19BQ9UMR2 479 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 ERICH4A6NGS2 130 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 ZNF445P59923 1031 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 TEX2Q8IWB9 1127 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 TERF1P54274 439 aa9.22□□□□□ -0.93
HDAC9-214ENST00000441542 ATF7IPQ6VMQ6 1270 aa9.21□□□□□ -0.93
HDAC9-214ENST00000441542 BCL2L12Q9HB09 334 aa9.21□□□□□ -0.93
HDAC9-214ENST00000441542 PTPRGP23470 1445 aa9.21□□□□□ -0.93
HDAC9-214ENST00000441542 SAFB2Q14151 953 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC9-214ENST00000441542 MYRIPQ8NFW9 859 aa9.21□□□□□ -0.94
HDAC9-214ENST00000441542 NUCB2P80303 420 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 NOLC1Q14978 699 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC9-214ENST00000441542 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 C16orf71Q8IYS4 520 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-214ENST00000441542 IPO4Q8TEX9 1081 aaKnown RBP9.2□□□□□ -0.94
HDAC9-214ENST00000441542 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 KCNJ4P48050 445 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 FAM69CQ0P6D2 419 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 CERS3Q8IU89 383 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 C9orf84Q5VXU9 1444 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 ZFP91Q96JP5 570 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-214ENST00000441542 PDLIM2Q96JY6 352 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
HDAC9-214ENST00000441542 CLSTN1O94985 981 aa9.19□□□□□ -0.94
HDAC9-214ENST00000441542 NUCB1Q02818 461 aa9.19□□□□□ -0.94
HDAC9-214ENST00000441542 CFAP70Q5T0N1 1121 aa9.19□□□□□ -0.94
HDAC9-214ENST00000441542 DNMT1P26358 1616 aaKnown RBP9.19□□□□□ -0.94
HDAC9-214ENST00000441542 NPHP1O15259 732 aa9.19□□□□□ -0.94
HDAC9-214ENST00000441542 AEBP1Q8IUX7 1158 aa9.19□□□□□ -0.94
HDAC9-214ENST00000441542 NINLQ9Y2I6 1382 aa9.19□□□□□ -0.94
HDAC9-214ENST00000441542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 SMARCA5O60264 1052 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 NAA30Q147X3 362 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 UTP14CQ5TAP6 766 aaKnown RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 ZNF592Q92610 1267 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 HCLS1P14317 486 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 HS1BP3Q53T59 392 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 OTUD7AQ8TE49 926 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 CFAP53Q96M91 514 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 GADD45BO75293 160 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-214ENST00000441542 CDC45O75419 566 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 ADCY5O95622 1261 aa9.18□□□□□ -0.94
HDAC9-214ENST00000441542 CHAF1AQ13111 956 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms