RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 USP35Q9P2H5 1018 aa13.45□□□□□ -0.26
GABRE-203ENST00000441219 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
GABRE-203ENST00000441219 SAFB2Q14151 953 aaKnown RBP eCLIP13.44□□□□□ -0.26
GABRE-203ENST00000441219 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
GABRE-203ENST00000441219 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
GABRE-203ENST00000441219 ANO8Q9HCE9 1232 aaPredicted RBP13.43□□□□□ -0.26
GABRE-203ENST00000441219 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
GABRE-203ENST00000441219 PDGFDQ9GZP0 370 aaPredicted RBP13.42□□□□□ -0.26
GABRE-203ENST00000441219 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
GABRE-203ENST00000441219 COL14A1Q05707 1796 aaKnown RBP13.41□□□□□ -0.26
GABRE-203ENST00000441219 NUP188Q5SRE5 1749 aa13.41□□□□□ -0.26
GABRE-203ENST00000441219 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
GABRE-203ENST00000441219 RGL3Q3MIN7 710 aa13.4□□□□□ -0.26
GABRE-203ENST00000441219 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
GABRE-203ENST00000441219 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.26
GABRE-203ENST00000441219 KIAA0232Q92628 1395 aa13.4□□□□□ -0.26
GABRE-203ENST00000441219 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
GABRE-203ENST00000441219 KIF1BO60333 1816 aa13.4□□□□□ -0.26
GABRE-203ENST00000441219 RREB1Q92766 1687 aa13.4□□□□□ -0.26
GABRE-203ENST00000441219 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
GABRE-203ENST00000441219 PTGER2P43116 358 aa13.39□□□□□ -0.27
GABRE-203ENST00000441219 SYT17Q9BSW7 474 aa13.39□□□□□ -0.27
GABRE-203ENST00000441219 FHDC1Q9C0D6 1143 aaPredicted RBP13.39□□□□□ -0.27
GABRE-203ENST00000441219 ACIN1Q9UKV3 1341 aaKnown RBP13.39□□□□□ -0.27
GABRE-203ENST00000441219 SIRT1Q96EB6 747 aa13.39□□□□□ -0.27
GABRE-203ENST00000441219 ZC3H6P61129 1189 aaKnown RBP13.38□□□□□ -0.27
GABRE-203ENST00000441219 BARGINQ6ZT62 677 aa13.38□□□□□ -0.27
GABRE-203ENST00000441219 PRAM1Q96QH2 718 aa13.38□□□□□ -0.27
GABRE-203ENST00000441219 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
GABRE-203ENST00000441219 EVA1CP58658 441 aa13.37□□□□□ -0.27
GABRE-203ENST00000441219 ANKARQ7Z5J8 1434 aa13.36□□□□□ -0.27
GABRE-203ENST00000441219 ANKRD30BQ9BXX2 1392 aa13.36□□□□□ -0.27
GABRE-203ENST00000441219 TCP11L2Q8N4U5 519 aa13.36□□□□□ -0.27
GABRE-203ENST00000441219 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
GABRE-203ENST00000441219 PPLO60437 1756 aa13.35□□□□□ -0.27
GABRE-203ENST00000441219 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
GABRE-203ENST00000441219 NGDNQ8NEJ9 315 aaKnown RBP13.35□□□□□ -0.27
GABRE-203ENST00000441219 POGKQ9P215 609 aa13.35□□□□□ -0.27
GABRE-203ENST00000441219 SSH2Q76I76 1423 aa13.35□□□□□ -0.27
GABRE-203ENST00000441219 HIRIP3Q9BW71 556 aaPredicted RBP13.34□□□□□ -0.27
GABRE-203ENST00000441219 PIK3C2GO75747 1445 aa13.34□□□□□ -0.27
GABRE-203ENST00000441219 PLSCR1O15162 318 aa13.33□□□□□ -0.28
GABRE-203ENST00000441219 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
GABRE-203ENST00000441219 PRR36Q9H6K5 1346 aa13.32□□□□□ -0.28
GABRE-203ENST00000441219 MYOM1P52179 1685 aa13.32□□□□□ -0.28
GABRE-203ENST00000441219 KNDC1Q76NI1 1749 aa13.32□□□□□ -0.28
GABRE-203ENST00000441219 PTF1AQ7RTS3 328 aa13.32□□□□□ -0.28
GABRE-203ENST00000441219 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
GABRE-203ENST00000441219 GPR162Q16538 588 aa13.31□□□□□ -0.28
GABRE-203ENST00000441219 CFAP70Q5T0N1 1121 aa13.31□□□□□ -0.28
GABRE-203ENST00000441219 C14orf93Q9H972 538 aaKnown RBP13.31□□□□□ -0.28
GABRE-203ENST00000441219 STK32BQ9NY57 414 aa13.31□□□□□ -0.28
GABRE-203ENST00000441219 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
GABRE-203ENST00000441219 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
GABRE-203ENST00000441219 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
GABRE-203ENST00000441219 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
GABRE-203ENST00000441219 PROM2Q8N271 834 aa13.3□□□□□ -0.28
GABRE-203ENST00000441219 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
GABRE-203ENST00000441219 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
GABRE-203ENST00000441219 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
GABRE-203ENST00000441219 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
GABRE-203ENST00000441219 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
GABRE-203ENST00000441219 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
GABRE-203ENST00000441219 SPATA31E1Q6ZUB1 1445 aa13.29□□□□□ -0.28
GABRE-203ENST00000441219 ARXQ96QS3 562 aa13.29□□□□□ -0.28
GABRE-203ENST00000441219 CASZ1Q86V15 1759 aa13.28□□□□□ -0.28
GABRE-203ENST00000441219 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
GABRE-203ENST00000441219 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
GABRE-203ENST00000441219 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
GABRE-203ENST00000441219 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
GABRE-203ENST00000441219 EIF3AQ14152 1382 aaKnown RBP13.27□□□□□ -0.29
GABRE-203ENST00000441219 DLC1Q96QB1 1528 aa13.27□□□□□ -0.29
GABRE-203ENST00000441219 PPARGC1BQ86YN6 1023 aaKnown RBP13.26□□□□□ -0.29
GABRE-203ENST00000441219 WASLO00401 505 aaPredicted RBP13.25□□□□□ -0.29
GABRE-203ENST00000441219 TXNRD1Q16881 649 aa13.25□□□□□ -0.29
GABRE-203ENST00000441219 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
GABRE-203ENST00000441219 GOLGB1Q14789 3259 aaKnown RBP13.25□□□□□ -0.29
GABRE-203ENST00000441219 DDB1Q16531 1140 aa13.24□□□□□ -0.29
GABRE-203ENST00000441219 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
GABRE-203ENST00000441219 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
GABRE-203ENST00000441219 MAP3K5Q99683 1374 aa13.23□□□□□ -0.29
GABRE-203ENST00000441219 CRYBG1Q9Y4K1 1723 aa13.23□□□□□ -0.29
GABRE-203ENST00000441219 ZBTB7CA1YPR0 619 aa13.22□□□□□ -0.29
GABRE-203ENST00000441219 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.29
GABRE-203ENST00000441219 ATP7BP35670 1465 aa13.21□□□□□ -0.29
GABRE-203ENST00000441219 CPDO75976 1380 aa13.21□□□□□ -0.3
GABRE-203ENST00000441219 COL5A2P05997 1499 aaPredicted RBP13.2□□□□□ -0.3
GABRE-203ENST00000441219 CRB1P82279 1406 aa13.2□□□□□ -0.3
GABRE-203ENST00000441219 HSPA6P17066 643 aa13.19□□□□□ -0.3
GABRE-203ENST00000441219 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
GABRE-203ENST00000441219 NUDT16Q96DE0 195 aaKnown RBP13.19□□□□□ -0.3
GABRE-203ENST00000441219 CHD4Q14839 1912 aa13.19□□□□□ -0.3
GABRE-203ENST00000441219 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
GABRE-203ENST00000441219 PEAK1Q9H792 1746 aa13.18□□□□□ -0.3
GABRE-203ENST00000441219 USP19O94966 1318 aa13.18□□□□□ -0.3
GABRE-203ENST00000441219 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
GABRE-203ENST00000441219 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
GABRE-203ENST00000441219 GCP02774 474 aa13.17□□□□□ -0.3
GABRE-203ENST00000441219 TOM1L2Q6ZVM7 507 aa13.17□□□□□ -0.3
GABRE-203ENST00000441219 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms