RNA–Protein interactions for RNA: ENST00000440787.5

ARPC4-204, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3

Gene ARPC4, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-204ENST00000440787 FNBP4Q8N3X1 1017 aaPredicted RBP27.86■■■□□ 2.05
ARPC4-204ENST00000440787 USP21Q9UK80 565 aa27.84■■■□□ 2.05
ARPC4-204ENST00000440787 CABP1Q9NZU7 370 aa27.83■■■□□ 2.05
ARPC4-204ENST00000440787 ATAD2Q6PL18 1390 aa27.83■■■□□ 2.05
ARPC4-204ENST00000440787 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.82■■■□□ 2.04
ARPC4-204ENST00000440787 RXRBP28702 533 aa27.82■■■□□ 2.04
ARPC4-204ENST00000440787 QTRT2Q9H974 415 aaKnown RBP27.81■■■□□ 2.04
ARPC4-204ENST00000440787 PLCH1Q4KWH8 1693 aa27.81■■■□□ 2.04
ARPC4-204ENST00000440787 BCL9LQ86UU0 1499 aa27.8■■■□□ 2.04
ARPC4-204ENST00000440787 SLIT2O94813 1529 aa27.8■■■□□ 2.04
ARPC4-204ENST00000440787 PHRF1Q9P1Y6 1649 aaKnown RBP27.8■■■□□ 2.04
ARPC4-204ENST00000440787 AKAP12Q02952 1782 aa27.79■■■□□ 2.04
ARPC4-204ENST00000440787 CDK12Q9NYV4 1490 aaPredicted RBP27.79■■■□□ 2.04
ARPC4-204ENST00000440787 USP6P35125 1406 aa27.79■■■□□ 2.04
ARPC4-204ENST00000440787 BRD4O60885 1362 aaPredicted RBP27.79■■■□□ 2.04
ARPC4-204ENST00000440787 NWD2Q9ULI1 1742 aa27.78■■■□□ 2.04
ARPC4-204ENST00000440787 ATRNO75882 1429 aa27.77■■■□□ 2.04
ARPC4-204ENST00000440787 USP47Q96K76 1375 aa27.77■■■□□ 2.04
ARPC4-204ENST00000440787 TRPC5Q9UL62 973 aaPredicted RBP27.77■■■□□ 2.04
ARPC4-204ENST00000440787 ST20-MTHFSA0A0A6YYL1 179 aa27.76■■■□□ 2.03
ARPC4-204ENST00000440787 RBM6P78332 1123 aaKnown RBP27.76■■■□□ 2.03
ARPC4-204ENST00000440787 COL14A1Q05707 1796 aaKnown RBP27.74■■■□□ 2.03
ARPC4-204ENST00000440787 TESK2Q96S53 571 aa27.74■■■□□ 2.03
ARPC4-204ENST00000440787 ABTB2Q8N961 1025 aa27.73■■■□□ 2.03
ARPC4-204ENST00000440787 NUTM2GQ5VZR2 741 aa27.72■■■□□ 2.03
ARPC4-204ENST00000440787 NRKQ7Z2Y5 1582 aa27.72■■■□□ 2.03
ARPC4-204ENST00000440787 CPSF1Q10570 1443 aaKnown RBP27.71■■■□□ 2.03
ARPC4-204ENST00000440787 SSH2Q76I76 1423 aa27.71■■■□□ 2.03
ARPC4-204ENST00000440787 MON2Q7Z3U7 1717 aa27.71■■■□□ 2.03
ARPC4-204ENST00000440787 UNC5CLQ8IV45 518 aa27.71■■■□□ 2.03
ARPC4-204ENST00000440787 RGS12O14924 1447 aa27.7■■■□□ 2.03
ARPC4-204ENST00000440787 PIK3C2AO00443 1686 aa27.69■■■□□ 2.02
ARPC4-204ENST00000440787 FAM83GA6ND36 823 aa27.69■■■□□ 2.02
ARPC4-204ENST00000440787 SLC24A1O60721 1099 aa27.69■■■□□ 2.02
ARPC4-204ENST00000440787 PUS7Q96PZ0 661 aaKnown RBP27.69■■■□□ 2.02
ARPC4-204ENST00000440787 ZNF692Q9BU19 519 aaPredicted RBP27.69■■■□□ 2.02
ARPC4-204ENST00000440787 NRAPQ86VF7 1730 aa27.69■■■□□ 2.02
ARPC4-204ENST00000440787 USP19O94966 1318 aa27.68■■■□□ 2.02
ARPC4-204ENST00000440787 KTN1Q86UP2 1357 aaKnown RBP27.66■■■□□ 2.02
ARPC4-204ENST00000440787 NLRP13Q86W25 1043 aa27.66■■■□□ 2.02
ARPC4-204ENST00000440787 CD163L1Q9NR16 1453 aa27.65■■■□□ 2.02
ARPC4-204ENST00000440787 KIAA0232Q92628 1395 aa27.65■■■□□ 2.02
ARPC4-204ENST00000440787 PRDM11Q9NQV5 511 aa27.65■■■□□ 2.02
ARPC4-204ENST00000440787 GLI3P10071 1580 aa27.65■■■□□ 2.02
ARPC4-204ENST00000440787 TMC1Q8TDI8 760 aa27.64■■■□□ 2.02
ARPC4-204ENST00000440787 GJD4Q96KN9 370 aaPredicted RBP27.64■■■□□ 2.02
ARPC4-204ENST00000440787 TTC21BQ7Z4L5 1316 aa27.63■■■□□ 2.01
ARPC4-204ENST00000440787 SLIT3O75094 1523 aa27.62■■■□□ 2.01
ARPC4-204ENST00000440787 BTG4Q9NY30 223 aa27.62■■■□□ 2.01
ARPC4-204ENST00000440787 TTC21AQ8NDW8 1320 aa27.62■■■□□ 2.01
ARPC4-204ENST00000440787 NINLQ9Y2I6 1382 aa27.61■■■□□ 2.01
ARPC4-204ENST00000440787 NLRP6P59044 892 aa27.61■■■□□ 2.01
ARPC4-204ENST00000440787 TMF1P82094 1093 aa27.61■■■□□ 2.01
ARPC4-204ENST00000440787 VPS72Q15906 364 aa27.61■■■□□ 2.01
ARPC4-204ENST00000440787 SLC12A5Q9H2X9 1139 aa27.61■■■□□ 2.01
ARPC4-204ENST00000440787 ZC3H6P61129 1189 aaKnown RBP27.6■■■□□ 2.01
ARPC4-204ENST00000440787 HDGFL2Q7Z4V5 671 aaPredicted RBP27.59■■■□□ 2.01
ARPC4-204ENST00000440787 CPDO75976 1380 aa27.59■■■□□ 2.01
ARPC4-204ENST00000440787 A0A1W2PP64 1363 aa27.58■■■□□ 2.01
ARPC4-204ENST00000440787 GCP02774 474 aa27.57■■■□□ 2
ARPC4-204ENST00000440787 CHRNA2Q15822 529 aa27.57■■■□□ 2
ARPC4-204ENST00000440787 TERF2IPQ9NYB0 399 aa27.57■■■□□ 2
ARPC4-204ENST00000440787 CCDC9Q9Y3X0 531 aaKnown RBP27.56■■■□□ 2
ARPC4-204ENST00000440787 USP54Q70EL1 1684 aa27.56■■■□□ 2
ARPC4-204ENST00000440787 LMO7Q8WWI1 1683 aa27.56■■■□□ 2
ARPC4-204ENST00000440787 EDC4Q6P2E9 1401 aaKnown RBP27.55■■■□□ 2
ARPC4-204ENST00000440787 CDCA8Q53HL2 280 aa27.52■■■□□ 2
ARPC4-204ENST00000440787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.52■■■□□ 2
ARPC4-204ENST00000440787 CAMTA1Q9Y6Y1 1673 aa27.5■■□□□ 1.99
ARPC4-204ENST00000440787 USP31Q70CQ4 1352 aa27.49■■□□□ 1.99
ARPC4-204ENST00000440787 ANKRD36BQ8N2N9 1353 aa27.48■■□□□ 1.99
ARPC4-204ENST00000440787 KCNH5Q8NCM2 988 aa27.48■■□□□ 1.99
ARPC4-204ENST00000440787 MYOM1P52179 1685 aa27.48■■□□□ 1.99
ARPC4-204ENST00000440787 NFAT5O94916 1531 aa27.47■■□□□ 1.99
ARPC4-204ENST00000440787 SPATA31A5Q5VU36 1347 aa27.47■■□□□ 1.99
ARPC4-204ENST00000440787 SPATA31A7Q8IWB4 1347 aa27.47■■□□□ 1.99
ARPC4-204ENST00000440787 BRWD3Q6RI45 1802 aa27.47■■□□□ 1.99
ARPC4-204ENST00000440787 EIF4G2P78344 907 aaKnown RBP eCLIP27.47■■□□□ 1.99
ARPC4-204ENST00000440787 NME9Q86XW9 330 aa27.47■■□□□ 1.99
ARPC4-204ENST00000440787 STRN4Q9NRL3 753 aa27.47■■□□□ 1.99
ARPC4-204ENST00000440787 COL18A1P39060 1754 aa27.45■■□□□ 1.99
ARPC4-204ENST00000440787 UPF1Q92900 1129 aaKnown RBP eCLIP27.45■■□□□ 1.982e-6■■□□□ 14.5
ARPC4-204ENST00000440787 ZRANB1Q9UGI0 708 aa27.45■■□□□ 1.98
ARPC4-204ENST00000440787 AATKQ6ZMQ8 1374 aa27.45■■□□□ 1.98
ARPC4-204ENST00000440787 ZBTB7CA1YPR0 619 aa27.44■■□□□ 1.98
ARPC4-204ENST00000440787 ONECUT3O60422 494 aaPredicted RBP27.44■■□□□ 1.98
ARPC4-204ENST00000440787 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
ARPC4-204ENST00000440787 SOX12O15370 315 aa27.43■■□□□ 1.98
ARPC4-204ENST00000440787 HSPA5P11021 654 aaKnown RBP27.43■■□□□ 1.98
ARPC4-204ENST00000440787 SEPT12Q8IYM1 358 aa27.43■■□□□ 1.98
ARPC4-204ENST00000440787 OVOS2A0A0J9YW53 1432 aa27.42■■□□□ 1.98
ARPC4-204ENST00000440787 OVOS2Q6IE36 1432 aa27.42■■□□□ 1.98
ARPC4-204ENST00000440787 EVA1CP58658 441 aa27.42■■□□□ 1.98
ARPC4-204ENST00000440787 SPATA31A1Q5TZJ5 1347 aa27.41■■□□□ 1.98
ARPC4-204ENST00000440787 THSD7AQ9UPZ6 1657 aa27.41■■□□□ 1.98
ARPC4-204ENST00000440787 FAM98CQ17RN3 349 aaKnown RBP27.41■■□□□ 1.98
ARPC4-204ENST00000440787 ARHGEF25Q86VW2 580 aa27.41■■□□□ 1.98
ARPC4-204ENST00000440787 ABCC6O95255 1503 aa27.4■■□□□ 1.98
ARPC4-204ENST00000440787 A0A0G2JS52 829 aa27.39■■□□□ 1.98
ARPC4-204ENST00000440787 MYT1Q01538 1121 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms