RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 FAM9BQ8IZU0 186 aa37.72■■■■□ 3.63
CGREF1-207ENST00000440612 NGDNQ8NEJ9 315 aaKnown RBP37.72■■■■□ 3.63
CGREF1-207ENST00000440612 C1orf167Q5SNV9 1468 aa37.71■■■■□ 3.63
CGREF1-207ENST00000440612 MST1RQ04912 1400 aa37.7■■■■□ 3.63
CGREF1-207ENST00000440612 TNNT2P45379 298 aaPredicted RBP37.69■■■■□ 3.62
CGREF1-207ENST00000440612 ZRANB1Q9UGI0 708 aa37.69■■■■□ 3.62
CGREF1-207ENST00000440612 ORAI2Q96SN7 254 aa37.67■■■■□ 3.62
CGREF1-207ENST00000440612 ESCO1Q5FWF5 840 aa37.66■■■■□ 3.62
CGREF1-207ENST00000440612 MSH6P52701 1360 aa37.64■■■■□ 3.62
CGREF1-207ENST00000440612 ATF3P18847 181 aa37.64■■■■□ 3.62
CGREF1-207ENST00000440612 TTC21AQ8NDW8 1320 aa37.62■■■■□ 3.61
CGREF1-207ENST00000440612 CADPS2Q86UW7 1296 aa37.61■■■■□ 3.61
CGREF1-207ENST00000440612 OVOS2A0A0J9YW53 1432 aa37.61■■■■□ 3.61
CGREF1-207ENST00000440612 OVOS2Q6IE36 1432 aa37.61■■■■□ 3.61
CGREF1-207ENST00000440612 SCAF1Q9H7N4 1312 aaKnown RBP37.61■■■■□ 3.61
CGREF1-207ENST00000440612 MTHFSP49914 203 aa37.59■■■■□ 3.61
CGREF1-207ENST00000440612 PIK3C2AO00443 1686 aa37.55■■■■□ 3.6
CGREF1-207ENST00000440612 COG3Q96JB2 828 aa37.55■■■■□ 3.6
CGREF1-207ENST00000440612 KIF1AQ12756 1690 aa37.55■■■■□ 3.6
CGREF1-207ENST00000440612 USP31Q70CQ4 1352 aa37.54■■■■□ 3.6
CGREF1-207ENST00000440612 FBLN1P23142 703 aa37.53■■■■□ 3.6
CGREF1-207ENST00000440612 AATKQ6ZMQ8 1374 aa37.52■■■■□ 3.6
CGREF1-207ENST00000440612 LTBP4Q8N2S1 1624 aa37.52■■■■□ 3.6
CGREF1-207ENST00000440612 FOXO3O43524 673 aa37.5■■■■□ 3.59
CGREF1-207ENST00000440612 INSRP06213 1382 aa37.49■■■■□ 3.59
CGREF1-207ENST00000440612 POLKQ9UBT6 870 aa37.48■■■■□ 3.59
CGREF1-207ENST00000440612 HNRNPUQ00839 825 aaKnown RBP eCLIP37.47■■■■□ 3.59
CGREF1-207ENST00000440612 PSME1Q06323 249 aa37.47■■■■□ 3.59
CGREF1-207ENST00000440612 COL3A1P02461 1466 aaPredicted RBP37.47■■■■□ 3.59
CGREF1-207ENST00000440612 USP54Q70EL1 1684 aa37.47■■■■□ 3.59
CGREF1-207ENST00000440612 PNPLA6Q8IY17 1366 aa37.47■■■■□ 3.59
CGREF1-207ENST00000440612 SMG6Q86US8 1419 aaKnown RBP37.47■■■■□ 3.59
CGREF1-207ENST00000440612 SHPRHQ149N8 1683 aa37.47■■■■□ 3.59
CGREF1-207ENST00000440612 MARF1Q9Y4F3 1742 aaKnown RBP37.47■■■■□ 3.59
CGREF1-207ENST00000440612 ADAMTS8Q9UP79 889 aa37.46■■■■□ 3.59
CGREF1-207ENST00000440612 TRPM3Q9HCF6 1732 aaPredicted RBP37.43■■■■□ 3.58
CGREF1-207ENST00000440612 BLMP54132 1417 aaPredicted RBP37.42■■■■□ 3.58
CGREF1-207ENST00000440612 CENPBP07199 599 aaPredicted RBP37.42■■■■□ 3.58
CGREF1-207ENST00000440612 MAP2P11137 1827 aaKnown RBP37.4■■■■□ 3.58
CGREF1-207ENST00000440612 PAK3O75914 559 aaPredicted RBP37.4■■■■□ 3.58
CGREF1-207ENST00000440612 XPCQ01831 940 aaPredicted RBP37.4■■■■□ 3.58
CGREF1-207ENST00000440612 ABTB2Q8N961 1025 aa37.39■■■■□ 3.58
CGREF1-207ENST00000440612 CFAP53Q96M91 514 aa37.39■■■■□ 3.58
CGREF1-207ENST00000440612 SLAIN2Q9P270 581 aa37.39■■■■□ 3.58
CGREF1-207ENST00000440612 EMILIN1Q9Y6C2 1016 aa37.39■■■■□ 3.58
CGREF1-207ENST00000440612 NLRP6P59044 892 aa37.38■■■■□ 3.57
CGREF1-207ENST00000440612 BRINP3Q76B58 766 aa37.38■■■■□ 3.57
CGREF1-207ENST00000440612 KRT28Q7Z3Y7 464 aa37.38■■■■□ 3.57
CGREF1-207ENST00000440612 WDR43Q15061 677 aaKnown RBP eCLIP37.37■■■■□ 3.57
CGREF1-207ENST00000440612 RRS1Q15050 365 aaKnown RBP37.36■■■■□ 3.57
CGREF1-207ENST00000440612 DDX17Q92841 729 aaKnown RBP37.35■■■■□ 3.57
CGREF1-207ENST00000440612 NUTM2GQ5VZR2 741 aa37.34■■■■□ 3.57
CGREF1-207ENST00000440612 CDK12Q9NYV4 1490 aaPredicted RBP37.34■■■■□ 3.57
CGREF1-207ENST00000440612 PXDNQ92626 1479 aa37.31■■■■□ 3.56
CGREF1-207ENST00000440612 ZBED9Q6R2W3 1325 aa37.3■■■■□ 3.56
CGREF1-207ENST00000440612 NPHP3Q7Z494 1330 aa37.3■■■■□ 3.56
CGREF1-207ENST00000440612 ALS2Q96Q42 1657 aa37.29■■■■□ 3.56
CGREF1-207ENST00000440612 AEBP2Q6ZN18 517 aaPredicted RBP37.28■■■■□ 3.56
CGREF1-207ENST00000440612 PEAK1Q9H792 1746 aa37.28■■■■□ 3.56
CGREF1-207ENST00000440612 SBNO1A3KN83 1393 aa37.27■■■■□ 3.56
CGREF1-207ENST00000440612 PPM1GO15355 546 aaPredicted RBP37.27■■■■□ 3.56
CGREF1-207ENST00000440612 MAP3K19Q56UN5 1328 aa37.25■■■■□ 3.55
CGREF1-207ENST00000440612 SENP3-EIF4A1A0A087X0R7 540 aa37.24■■■■□ 3.55
CGREF1-207ENST00000440612 SOX12O15370 315 aa37.24■■■■□ 3.55
CGREF1-207ENST00000440612 DIAPH1O60610 1272 aaKnown RBP37.24■■■■□ 3.55
CGREF1-207ENST00000440612 NFAT5O94916 1531 aa37.23■■■■□ 3.55
CGREF1-207ENST00000440612 SLIT3O75094 1523 aa37.22■■■■□ 3.55
CGREF1-207ENST00000440612 USP19O94966 1318 aa37.22■■■■□ 3.55
CGREF1-207ENST00000440612 IL13P35225 146 aa37.2■■■■□ 3.55
CGREF1-207ENST00000440612 SOS2Q07890 1332 aaPredicted RBP37.18■■■■□ 3.54
CGREF1-207ENST00000440612 TNS3Q68CZ2 1445 aa37.18■■■■□ 3.54
CGREF1-207ENST00000440612 CCDC146Q8IYE0 955 aa37.18■■■■□ 3.54
CGREF1-207ENST00000440612 NUDCQ9Y266 331 aa37.18■■■■□ 3.54
CGREF1-207ENST00000440612 SPATA31A3Q5VYP0 1347 aa37.17■■■■□ 3.54
CGREF1-207ENST00000440612 U2AF1L5P0DN76 240 aaPredicted RBP37.15■■■■□ 3.54
CGREF1-207ENST00000440612 U2AF1Q01081 240 aaKnown RBP eCLIP37.15■■■■□ 3.54
CGREF1-207ENST00000440612 MED1Q15648 1581 aaPredicted RBP37.14■■■■□ 3.54
CGREF1-207ENST00000440612 NHSL1Q5SYE7 1610 aa37.14■■■■□ 3.54
CGREF1-207ENST00000440612 HSP90AB2PQ58FF8 381 aa37.14■■■■□ 3.54
CGREF1-207ENST00000440612 KIF24Q5T7B8 1368 aa37.13■■■■□ 3.54
CGREF1-207ENST00000440612 LMOD2Q6P5Q4 547 aa37.13■■■■□ 3.53
CGREF1-207ENST00000440612 FLT4P35916 1363 aa37.13■■■■□ 3.53
CGREF1-207ENST00000440612 U2SURPO15042 1029 aaKnown RBP37.12■■■■□ 3.53
CGREF1-207ENST00000440612 KCNH5Q8NCM2 988 aa37.12■■■■□ 3.53
CGREF1-207ENST00000440612 GCP02774 474 aa37.11■■■■□ 3.53
CGREF1-207ENST00000440612 EIF4A2Q14240 407 aaKnown RBP37.1■■■■□ 3.53
CGREF1-207ENST00000440612 PLEKHF1Q96S99 279 aa37.09■■■■□ 3.53
CGREF1-207ENST00000440612 RUNDC1Q96C34 613 aa37.08■■■■□ 3.53
CGREF1-207ENST00000440612 IQSEC2Q5JU85 1478 aa37.08■■■■□ 3.53
CGREF1-207ENST00000440612 APAF1O14727 1248 aa37.07■■■■□ 3.52
CGREF1-207ENST00000440612 HOXC9P31274 260 aa37.06■■■■□ 3.52
CGREF1-207ENST00000440612 PHRF1Q9P1Y6 1649 aaKnown RBP37.06■■■■□ 3.52
CGREF1-207ENST00000440612 AMPHP49418 695 aa37.05■■■■□ 3.52
CGREF1-207ENST00000440612 LTN1O94822 1766 aa37.05■■■■□ 3.52
CGREF1-207ENST00000440612 RTL1A6NKG5 1358 aa37.05■■■■□ 3.52
CGREF1-207ENST00000440612 ARHGEF10O15013 1369 aa37.05■■■■□ 3.52
CGREF1-207ENST00000440612 ROBO1Q9Y6N7 1651 aa37.05■■■■□ 3.52
CGREF1-207ENST00000440612 SALL2Q9Y467 1007 aaPredicted RBP37.05■■■■□ 3.52
CGREF1-207ENST00000440612 CRYBG1Q9Y4K1 1723 aa37.04■■■■□ 3.52
CGREF1-207ENST00000440612 ARHGEF25Q86VW2 580 aa37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms