RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 GPS2Q13227 327 aa13.93□□□□□ -0.18
CCBE1-202ENST00000439986 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-202ENST00000439986 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
CCBE1-202ENST00000439986 C9orf78Q9NZ63 289 aaPredicted RBP13.92□□□□□ -0.18
CCBE1-202ENST00000439986 C9orf84Q5VXU9 1444 aa13.92□□□□□ -0.18
CCBE1-202ENST00000439986 PRG4Q92954 1404 aaPredicted RBP13.92□□□□□ -0.18
CCBE1-202ENST00000439986 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
CCBE1-202ENST00000439986 COG3Q96JB2 828 aa13.92□□□□□ -0.18
CCBE1-202ENST00000439986 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
CCBE1-202ENST00000439986 PDILTQ8N807 584 aa13.92□□□□□ -0.18
CCBE1-202ENST00000439986 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
CCBE1-202ENST00000439986 ERBINQ96RT1 1412 aa13.91□□□□□ -0.18
CCBE1-202ENST00000439986 ZNF428Q96B54 188 aa13.91□□□□□ -0.18
CCBE1-202ENST00000439986 TRIM29Q14134 588 aa13.91□□□□□ -0.18
CCBE1-202ENST00000439986 AMOTL1Q8IY63 956 aa13.91□□□□□ -0.18
CCBE1-202ENST00000439986 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
CCBE1-202ENST00000439986 SLFN5Q08AF3 891 aa13.91□□□□□ -0.18
CCBE1-202ENST00000439986 KIF3AQ9Y496 699 aa13.91□□□□□ -0.18
CCBE1-202ENST00000439986 EXOSC9Q06265 439 aaKnown RBP13.9□□□□□ -0.18
CCBE1-202ENST00000439986 INTS3Q68E01 1043 aaKnown RBP13.9□□□□□ -0.18
CCBE1-202ENST00000439986 DZIP1Q86YF9 867 aaKnown RBP13.9□□□□□ -0.18
CCBE1-202ENST00000439986 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
CCBE1-202ENST00000439986 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
CCBE1-202ENST00000439986 MCM4P33991 863 aa13.9□□□□□ -0.18
CCBE1-202ENST00000439986 USP8P40818 1118 aa13.9□□□□□ -0.18
CCBE1-202ENST00000439986 CDC45O75419 566 aa13.9□□□□□ -0.18
CCBE1-202ENST00000439986 ECM2O94769 699 aaPredicted RBP13.9□□□□□ -0.18
CCBE1-202ENST00000439986 TEFQ10587 303 aa13.9□□□□□ -0.18
CCBE1-202ENST00000439986 GGNBP2Q9H3C7 697 aa13.9□□□□□ -0.18
CCBE1-202ENST00000439986 TRIM63Q969Q1 353 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 HECW1Q76N89 1606 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 CCP110O43303 1012 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 TPM1P09493 284 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
CCBE1-202ENST00000439986 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 EPRSP07814 1512 aaKnown RBP13.89□□□□□ -0.19
CCBE1-202ENST00000439986 CDK13Q14004 1512 aaKnown RBP13.89□□□□□ -0.19
CCBE1-202ENST00000439986 RPRD2Q5VT52 1461 aaKnown RBP13.89□□□□□ -0.19
CCBE1-202ENST00000439986 TROQ12816 1431 aaPredicted RBP13.89□□□□□ -0.19
CCBE1-202ENST00000439986 TDO2P48775 406 aa13.89□□□□□ -0.19
CCBE1-202ENST00000439986 DNAJC2Q99543 621 aaKnown RBP13.89□□□□□ -0.19
CCBE1-202ENST00000439986 R3HCC1Q9Y3T6 440 aaKnown RBP13.89□□□□□ -0.19
CCBE1-202ENST00000439986 DNAI2Q9GZS0 605 aa13.88□□□□□ -0.19
CCBE1-202ENST00000439986 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
CCBE1-202ENST00000439986 IBSPP21815 317 aaPredicted RBP13.88□□□□□ -0.19
CCBE1-202ENST00000439986 TSR2Q969E8 191 aaKnown RBP13.88□□□□□ -0.19
CCBE1-202ENST00000439986 GRPEL1Q9HAV7 217 aa13.88□□□□□ -0.19
CCBE1-202ENST00000439986 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
CCBE1-202ENST00000439986 CAVIN1Q6NZI2 390 aaKnown RBP13.87□□□□□ -0.19
CCBE1-202ENST00000439986 SH3BP5O60239 455 aa13.87□□□□□ -0.19
CCBE1-202ENST00000439986 AIMP1Q12904 312 aaKnown RBP13.87□□□□□ -0.19
CCBE1-202ENST00000439986 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
CCBE1-202ENST00000439986 GNAI1P63096 354 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 TMEM132EQ6IEE7 984 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCBE1-202ENST00000439986 CPLX1O14810 134 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 SKIDA1Q1XH10 827 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 PTPRKQ15262 1439 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
CCBE1-202ENST00000439986 NEXNQ0ZGT2 675 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
CCBE1-202ENST00000439986 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 RNF214Q8ND24 703 aa13.86□□□□□ -0.19
CCBE1-202ENST00000439986 CCDC43Q96MW1 224 aaKnown RBP13.86□□□□□ -0.19
CCBE1-202ENST00000439986 HMOX1P09601 288 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 CCDC70Q6NSX1 233 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 RDXP35241 583 aaKnown RBP13.85□□□□□ -0.19
CCBE1-202ENST00000439986 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
CCBE1-202ENST00000439986 ABCC5O15440 1437 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 PPP4R4Q6NUP7 873 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 NESP48681 1621 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 ERICH4A6NGS2 130 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
CCBE1-202ENST00000439986 CCDC173Q0VFZ6 552 aa13.84□□□□□ -0.19
CCBE1-202ENST00000439986 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
CCBE1-202ENST00000439986 SLC12A5Q9H2X9 1139 aa13.84□□□□□ -0.19
CCBE1-202ENST00000439986 NOB1Q9ULX3 412 aaKnown RBP13.84□□□□□ -0.19
CCBE1-202ENST00000439986 WDR63Q8IWG1 891 aa13.84□□□□□ -0.19
CCBE1-202ENST00000439986 ESPNB1AK53 854 aa13.84□□□□□ -0.19
CCBE1-202ENST00000439986 PSME1Q06323 249 aa13.84□□□□□ -0.19
CCBE1-202ENST00000439986 C1orf115Q9H7X2 142 aa13.83□□□□□ -0.19
CCBE1-202ENST00000439986 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
CCBE1-202ENST00000439986 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
CCBE1-202ENST00000439986 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
CCBE1-202ENST00000439986 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
CCBE1-202ENST00000439986 ERICH2A1L162 156 aa13.82□□□□□ -0.2
CCBE1-202ENST00000439986 DEF6Q9H4E7 631 aa13.82□□□□□ -0.2
CCBE1-202ENST00000439986 PRPF40AO75400 957 aaKnown RBP13.82□□□□□ -0.2
CCBE1-202ENST00000439986 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
CCBE1-202ENST00000439986 ATF7IPQ6VMQ6 1270 aa13.82□□□□□ -0.2
CCBE1-202ENST00000439986 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
CCBE1-202ENST00000439986 RBM33Q96EV2 1170 aaKnown RBP13.82□□□□□ -0.2
CCBE1-202ENST00000439986 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms