RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 CADPS2Q86UW7 1296 aa13.59□□□□□ -0.23
CBX5-202ENST00000439541 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
CBX5-202ENST00000439541 KIF1AQ12756 1690 aa13.59□□□□□ -0.23
CBX5-202ENST00000439541 SSH2Q76I76 1423 aa13.58□□□□□ -0.23
CBX5-202ENST00000439541 FYB1O15117 783 aa13.58□□□□□ -0.24
CBX5-202ENST00000439541 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
CBX5-202ENST00000439541 RALBP1Q15311 655 aa13.58□□□□□ -0.24
CBX5-202ENST00000439541 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
CBX5-202ENST00000439541 PIK3C2AO00443 1686 aa13.58□□□□□ -0.24
CBX5-202ENST00000439541 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
CBX5-202ENST00000439541 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
CBX5-202ENST00000439541 NSD2O96028 1365 aa13.57□□□□□ -0.24
CBX5-202ENST00000439541 CCER2I3L3R5 266 aa13.57□□□□□ -0.24
CBX5-202ENST00000439541 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
CBX5-202ENST00000439541 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
CBX5-202ENST00000439541 FOXO3O43524 673 aa13.55□□□□□ -0.24
CBX5-202ENST00000439541 MYT1Q01538 1121 aa13.55□□□□□ -0.24
CBX5-202ENST00000439541 MORC1Q86VD1 984 aa13.55□□□□□ -0.24
CBX5-202ENST00000439541 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
CBX5-202ENST00000439541 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
CBX5-202ENST00000439541 OVOS2A0A0J9YW53 1432 aa13.54□□□□□ -0.24
CBX5-202ENST00000439541 OVOS2Q6IE36 1432 aa13.54□□□□□ -0.24
CBX5-202ENST00000439541 TRPM3Q9HCF6 1732 aaPredicted RBP13.54□□□□□ -0.24
CBX5-202ENST00000439541 BRINP3Q76B58 766 aa13.53□□□□□ -0.24
CBX5-202ENST00000439541 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
CBX5-202ENST00000439541 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
CBX5-202ENST00000439541 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
CBX5-202ENST00000439541 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
CBX5-202ENST00000439541 FBLN1P23142 703 aa13.52□□□□□ -0.25
CBX5-202ENST00000439541 PSME1Q06323 249 aa13.52□□□□□ -0.25
CBX5-202ENST00000439541 NUTM2GQ5VZR2 741 aa13.52□□□□□ -0.25
CBX5-202ENST00000439541 BRD4O60885 1362 aaPredicted RBP13.51□□□□□ -0.25
CBX5-202ENST00000439541 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
CBX5-202ENST00000439541 PXDNQ92626 1479 aa13.51□□□□□ -0.25
CBX5-202ENST00000439541 COG3Q96JB2 828 aa13.5□□□□□ -0.25
CBX5-202ENST00000439541 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
CBX5-202ENST00000439541 SOX12O15370 315 aa13.49□□□□□ -0.25
CBX5-202ENST00000439541 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
CBX5-202ENST00000439541 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
CBX5-202ENST00000439541 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
CBX5-202ENST00000439541 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
CBX5-202ENST00000439541 NHSL1Q5SYE7 1610 aa13.48□□□□□ -0.25
CBX5-202ENST00000439541 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
CBX5-202ENST00000439541 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
CBX5-202ENST00000439541 NLRP6P59044 892 aa13.47□□□□□ -0.25
CBX5-202ENST00000439541 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
CBX5-202ENST00000439541 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
CBX5-202ENST00000439541 MTHFSP49914 203 aa13.46□□□□□ -0.25
CBX5-202ENST00000439541 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
CBX5-202ENST00000439541 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
CBX5-202ENST00000439541 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.26
CBX5-202ENST00000439541 SHPRHQ149N8 1683 aa13.45□□□□□ -0.26
CBX5-202ENST00000439541 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
CBX5-202ENST00000439541 PEAK1Q9H792 1746 aa13.45□□□□□ -0.26
CBX5-202ENST00000439541 COL3A1P02461 1466 aaPredicted RBP13.45□□□□□ -0.26
CBX5-202ENST00000439541 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
CBX5-202ENST00000439541 MED1Q15648 1581 aaPredicted RBP13.44□□□□□ -0.26
CBX5-202ENST00000439541 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
CBX5-202ENST00000439541 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
CBX5-202ENST00000439541 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
CBX5-202ENST00000439541 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
CBX5-202ENST00000439541 NFAT5O94916 1531 aa13.43□□□□□ -0.26
CBX5-202ENST00000439541 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
CBX5-202ENST00000439541 SLIT3O75094 1523 aa13.43□□□□□ -0.26
CBX5-202ENST00000439541 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
CBX5-202ENST00000439541 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
CBX5-202ENST00000439541 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
CBX5-202ENST00000439541 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
CBX5-202ENST00000439541 PHRF1Q9P1Y6 1649 aaKnown RBP13.42□□□□□ -0.26
CBX5-202ENST00000439541 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
CBX5-202ENST00000439541 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
CBX5-202ENST00000439541 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
CBX5-202ENST00000439541 CRYBG1Q9Y4K1 1723 aa13.42□□□□□ -0.26
CBX5-202ENST00000439541 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
CBX5-202ENST00000439541 USP19O94966 1318 aa13.41□□□□□ -0.26
CBX5-202ENST00000439541 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
CBX5-202ENST00000439541 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
CBX5-202ENST00000439541 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
CBX5-202ENST00000439541 LTN1O94822 1766 aa13.4□□□□□ -0.26
CBX5-202ENST00000439541 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
CBX5-202ENST00000439541 TOM1O60784 492 aa13.39□□□□□ -0.27
CBX5-202ENST00000439541 CFAP53Q96M91 514 aa13.39□□□□□ -0.27
CBX5-202ENST00000439541 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
CBX5-202ENST00000439541 ARHGEF10O15013 1369 aa13.38□□□□□ -0.27
CBX5-202ENST00000439541 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
CBX5-202ENST00000439541 COL16A1Q07092 1604 aaPredicted RBP13.38□□□□□ -0.27
CBX5-202ENST00000439541 PHLPP1O60346 1717 aa13.38□□□□□ -0.27
CBX5-202ENST00000439541 ZBTB7CA1YPR0 619 aa13.38□□□□□ -0.27
CBX5-202ENST00000439541 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
CBX5-202ENST00000439541 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
CBX5-202ENST00000439541 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
CBX5-202ENST00000439541 GCP02774 474 aa13.36□□□□□ -0.27
CBX5-202ENST00000439541 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
CBX5-202ENST00000439541 FLT4P35916 1363 aa13.36□□□□□ -0.27
CBX5-202ENST00000439541 HSP90AB2PQ58FF8 381 aa13.36□□□□□ -0.27
CBX5-202ENST00000439541 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
CBX5-202ENST00000439541 INSRP06213 1382 aa13.35□□□□□ -0.27
CBX5-202ENST00000439541 U2SURPO15042 1029 aaKnown RBP13.34□□□□□ -0.27
CBX5-202ENST00000439541 DIAPH1O60610 1272 aaKnown RBP13.34□□□□□ -0.27
CBX5-202ENST00000439541 CCDC146Q8IYE0 955 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms