RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SCAPERQ9BY12 1400 aa7.71□□□□□ -1.18
BDNF-211ENST00000439476 TNNT3P45378 269 aaPredicted RBP7.71□□□□□ -1.18
BDNF-211ENST00000439476 RARSP54136 660 aaKnown RBP7.71□□□□□ -1.18
BDNF-211ENST00000439476 FOXD4L6Q3SYB3 417 aaPredicted RBP7.71□□□□□ -1.18
BDNF-211ENST00000439476 GORABQ5T7V8 394 aa7.71□□□□□ -1.18
BDNF-211ENST00000439476 FOXD4L3Q6VB84 417 aaPredicted RBP7.71□□□□□ -1.18
BDNF-211ENST00000439476 MTERF4Q7Z6M4 381 aaKnown RBP7.71□□□□□ -1.18
BDNF-211ENST00000439476 PUS7Q96PZ0 661 aaKnown RBP7.71□□□□□ -1.18
BDNF-211ENST00000439476 EID1Q9Y6B2 187 aa7.71□□□□□ -1.18
BDNF-211ENST00000439476 CPLX2Q6PUV4 134 aaKnown RBP7.7□□□□□ -1.18
BDNF-211ENST00000439476 GGNBP2Q9H3C7 697 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 ZBTB12Q9Y330 459 aaPredicted RBP7.7□□□□□ -1.18
BDNF-211ENST00000439476 ARHGAP5Q13017 1502 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 CDC45O75419 566 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 NOB1Q9ULX3 412 aaKnown RBP7.7□□□□□ -1.18
BDNF-211ENST00000439476 R3HCC1Q9Y3T6 440 aaKnown RBP7.7□□□□□ -1.18
BDNF-211ENST00000439476 TEX14Q8IWB6 1497 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 TPM1P09493 284 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 CLCN1P35523 988 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 ATF7IPQ6VMQ6 1270 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 CCDC173Q0VFZ6 552 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 CAVIN1Q6NZI2 390 aaKnown RBP7.7□□□□□ -1.18
BDNF-211ENST00000439476 BANK1Q8NDB2 785 aa7.7□□□□□ -1.18
BDNF-211ENST00000439476 SYNJ2O15056 1496 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
BDNF-211ENST00000439476 INTS3Q68E01 1043 aaKnown RBP7.69□□□□□ -1.18
BDNF-211ENST00000439476 AFAP1Q8N556 730 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 TBC1D32Q96NH3 1257 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 CIZ1Q9ULV3 898 aaPredicted RBP7.69□□□□□ -1.18
BDNF-211ENST00000439476 MINK1Q8N4C8 1332 aaPredicted RBP7.69□□□□□ -1.18
BDNF-211ENST00000439476 SPATA31E1Q6ZUB1 1445 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 CTTNBP2Q8WZ74 1663 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 GOLGA6L19H0YKK7 550 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 PER1O15534 1290 aaPredicted RBP7.69□□□□□ -1.18
BDNF-211ENST00000439476 HSP90AB4PQ58FF6 505 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 TAF3Q5VWG9 929 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 CCDC70Q6NSX1 233 aa7.69□□□□□ -1.18
BDNF-211ENST00000439476 NOC3LQ8WTT2 800 aaKnown RBP7.69□□□□□ -1.18
BDNF-211ENST00000439476 ARHGEF11O15085 1522 aa7.68□□□□□ -1.18
BDNF-211ENST00000439476 PLB1Q6P1J6 1458 aa7.68□□□□□ -1.18
BDNF-211ENST00000439476 CT47B1P0C2W7 299 aaPredicted RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 SF3A1Q15459 793 aaKnown RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 TARBP1Q13395 1621 aaKnown RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 DMTNQ08495 405 aa7.68□□□□□ -1.18
BDNF-211ENST00000439476 TSR1Q2NL82 804 aaKnown RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 RILPL2Q969X0 211 aa7.68□□□□□ -1.18
BDNF-211ENST00000439476 K7ELQ4 463 aaPredicted RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 EP400NLQ6ZTU2 488 aa7.68□□□□□ -1.18
BDNF-211ENST00000439476 DNAJC2Q99543 621 aaKnown RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 CABP2Q9NPB3 220 aa7.68□□□□□ -1.18
BDNF-211ENST00000439476 ZKSCAN1P17029 563 aaPredicted RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 TMX4Q9H1E5 349 aaPredicted RBP7.68□□□□□ -1.18
BDNF-211ENST00000439476 C1orf115Q9H7X2 142 aa7.68□□□□□ -1.18
BDNF-211ENST00000439476 GPATCH8Q9UKJ3 1502 aaKnown RBP7.67□□□□□ -1.18
BDNF-211ENST00000439476 GNAI1P63096 354 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 DHX8Q14562 1220 aaKnown RBP7.67□□□□□ -1.18
BDNF-211ENST00000439476 GCC1Q96CN9 775 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 HOOK1Q9UJC3 728 aaKnown RBP7.67□□□□□ -1.18
BDNF-211ENST00000439476 PLEKHH1Q9ULM0 1364 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 CCDC141Q6ZP82 1450 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 RNF20Q5VTR2 975 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 CHD1LQ86WJ1 897 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 HMOX1P09601 288 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 XRCC6P12956 609 aaKnown RBP eCLIP7.67□□□□□ -1.18
BDNF-211ENST00000439476 RABEP1Q15276 862 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 RNF214Q8ND24 703 aa7.67□□□□□ -1.18
BDNF-211ENST00000439476 EIF4G3O43432 1585 aaKnown RBP7.67□□□□□ -1.18
BDNF-211ENST00000439476 KDM2BQ8NHM5 1336 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 MAGI1Q96QZ7 1491 aaPredicted RBP7.66□□□□□ -1.18
BDNF-211ENST00000439476 BECN2A8MW95 431 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 PRPF40AO75400 957 aaKnown RBP7.66□□□□□ -1.18
BDNF-211ENST00000439476 SETQ01105 290 aaPredicted RBP7.66□□□□□ -1.18
BDNF-211ENST00000439476 UTP14CQ5TAP6 766 aaKnown RBP7.66□□□□□ -1.18
BDNF-211ENST00000439476 ABCA5Q8WWZ7 1642 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 PZPP20742 1482 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 GOLIM4O00461 696 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 AMPHP49418 695 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 TESK2Q96S53 571 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 SEC24BO95487 1268 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 TMEM57Q8N5G2 664 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 FAM184AQ8NB25 1140 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 PCDHB15Q9Y5E8 787 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 H3BQV1 296 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 KIF20AO95235 890 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 CSB-PGBD3P0DP91 1061 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 TRHP20396 242 aaPredicted RBP7.66□□□□□ -1.18
BDNF-211ENST00000439476 ARID4AP29374 1257 aaPredicted RBP7.66□□□□□ -1.18
BDNF-211ENST00000439476 IFFO2Q5TF58 517 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 ZNF428Q96B54 188 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 COG3Q96JB2 828 aa7.66□□□□□ -1.18
BDNF-211ENST00000439476 PBRM1Q86U86 1689 aa7.65□□□□□ -1.18
BDNF-211ENST00000439476 ANKRD20A12PQ8NF67 263 aa7.65□□□□□ -1.18
BDNF-211ENST00000439476 CEP89Q96ST8 783 aa7.65□□□□□ -1.18
BDNF-211ENST00000439476 PRAG1Q86YV5 1406 aa7.65□□□□□ -1.18
BDNF-211ENST00000439476 MCM2P49736 904 aa7.65□□□□□ -1.18
BDNF-211ENST00000439476 ZNF771Q7L3S4 317 aaPredicted RBP7.65□□□□□ -1.18
BDNF-211ENST00000439476 PANK2Q9BZ23 570 aa7.65□□□□□ -1.18
BDNF-211ENST00000439476 ANO2Q9NQ90 1003 aa7.65□□□□□ -1.18
BDNF-211ENST00000439476 CCDC39Q9UFE4 941 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms