RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 TRAK1Q9UPV9 953 aa11.69□□□□□ -0.54
LINC00578-201ENST00000439009 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
LINC00578-201ENST00000439009 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
LINC00578-201ENST00000439009 SPATA31A1Q5TZJ5 1347 aa11.68□□□□□ -0.54
LINC00578-201ENST00000439009 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
LINC00578-201ENST00000439009 RGPD8O14715 1765 aaPredicted RBP11.68□□□□□ -0.54
LINC00578-201ENST00000439009 COL14A1Q05707 1796 aaKnown RBP11.67□□□□□ -0.54
LINC00578-201ENST00000439009 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
LINC00578-201ENST00000439009 TULP4Q9NRJ4 1543 aa11.67□□□□□ -0.54
LINC00578-201ENST00000439009 R3HDM1Q15032 1099 aaKnown RBP11.67□□□□□ -0.54
LINC00578-201ENST00000439009 FAM182BQ5T319 152 aa11.67□□□□□ -0.54
LINC00578-201ENST00000439009 FAM196AQ6ZSG2 479 aa11.67□□□□□ -0.54
LINC00578-201ENST00000439009 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
LINC00578-201ENST00000439009 PRDM11Q9NQV5 511 aa11.67□□□□□ -0.54
LINC00578-201ENST00000439009 ALS2Q96Q42 1657 aa11.67□□□□□ -0.54
LINC00578-201ENST00000439009 THSD7AQ9UPZ6 1657 aa11.66□□□□□ -0.54
LINC00578-201ENST00000439009 EZH2Q15910 746 aaKnown RBP11.66□□□□□ -0.54
LINC00578-201ENST00000439009 PARD3Q8TEW0 1356 aa11.66□□□□□ -0.54
LINC00578-201ENST00000439009 BARGINQ6ZT62 677 aa11.65□□□□□ -0.54
LINC00578-201ENST00000439009 KIAA0232Q92628 1395 aa11.65□□□□□ -0.55
LINC00578-201ENST00000439009 PAK3O75914 559 aaPredicted RBP11.64□□□□□ -0.55
LINC00578-201ENST00000439009 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
LINC00578-201ENST00000439009 TRIM37O94972 964 aa11.63□□□□□ -0.55
LINC00578-201ENST00000439009 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
LINC00578-201ENST00000439009 POLR3AO14802 1390 aaPredicted RBP11.63□□□□□ -0.55
LINC00578-201ENST00000439009 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
LINC00578-201ENST00000439009 PLEKHG3A1L390 1219 aa11.62□□□□□ -0.55
LINC00578-201ENST00000439009 APBA3O96018 575 aa11.62□□□□□ -0.55
LINC00578-201ENST00000439009 CHRNA2Q15822 529 aa11.62□□□□□ -0.55
LINC00578-201ENST00000439009 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
LINC00578-201ENST00000439009 ATP7BP35670 1465 aa11.62□□□□□ -0.55
LINC00578-201ENST00000439009 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
LINC00578-201ENST00000439009 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
LINC00578-201ENST00000439009 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
LINC00578-201ENST00000439009 CPDO75976 1380 aa11.61□□□□□ -0.55
LINC00578-201ENST00000439009 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
LINC00578-201ENST00000439009 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
LINC00578-201ENST00000439009 CDK19Q9BWU1 502 aa11.6□□□□□ -0.55
LINC00578-201ENST00000439009 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
LINC00578-201ENST00000439009 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
LINC00578-201ENST00000439009 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
LINC00578-201ENST00000439009 C11orf95C9JLR9 678 aaPredicted RBP11.59□□□□□ -0.55
LINC00578-201ENST00000439009 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
LINC00578-201ENST00000439009 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
LINC00578-201ENST00000439009 TNS1Q9HBL0 1735 aaKnown RBP11.59□□□□□ -0.55
LINC00578-201ENST00000439009 USP19O94966 1318 aa11.59□□□□□ -0.55
LINC00578-201ENST00000439009 ACEP12821 1306 aa11.59□□□□□ -0.55
LINC00578-201ENST00000439009 EVA1CP58658 441 aa11.58□□□□□ -0.56
LINC00578-201ENST00000439009 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
LINC00578-201ENST00000439009 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
LINC00578-201ENST00000439009 CAMTA1Q9Y6Y1 1673 aa11.57□□□□□ -0.56
LINC00578-201ENST00000439009 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
LINC00578-201ENST00000439009 GCP02774 474 aa11.56□□□□□ -0.56
LINC00578-201ENST00000439009 ABTB2Q8N961 1025 aa11.56□□□□□ -0.56
LINC00578-201ENST00000439009 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
LINC00578-201ENST00000439009 BRD4O60885 1362 aaPredicted RBP11.55□□□□□ -0.56
LINC00578-201ENST00000439009 PLSCR1O15162 318 aa11.55□□□□□ -0.56
LINC00578-201ENST00000439009 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
LINC00578-201ENST00000439009 SPON1Q9HCB6 807 aa11.55□□□□□ -0.56
LINC00578-201ENST00000439009 KCNQ2O43526 872 aa11.54□□□□□ -0.56
LINC00578-201ENST00000439009 PHRF1Q9P1Y6 1649 aaKnown RBP11.53□□□□□ -0.56
LINC00578-201ENST00000439009 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
LINC00578-201ENST00000439009 YY1P25490 414 aa11.53□□□□□ -0.56
LINC00578-201ENST00000439009 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.57
LINC00578-201ENST00000439009 RREB1Q92766 1687 aa11.52□□□□□ -0.57
LINC00578-201ENST00000439009 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.57
LINC00578-201ENST00000439009 NINLQ9Y2I6 1382 aa11.52□□□□□ -0.57
LINC00578-201ENST00000439009 ITSN1Q15811 1721 aa11.52□□□□□ -0.57
LINC00578-201ENST00000439009 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
LINC00578-201ENST00000439009 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
LINC00578-201ENST00000439009 BCL9O00512 1426 aa11.51□□□□□ -0.57
LINC00578-201ENST00000439009 CRB1P82279 1406 aa11.51□□□□□ -0.57
LINC00578-201ENST00000439009 TOPAZ1Q8N9V7 1692 aa11.5□□□□□ -0.57
LINC00578-201ENST00000439009 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
LINC00578-201ENST00000439009 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
LINC00578-201ENST00000439009 OVOS2A0A0G2JMS6 1433 aa11.5□□□□□ -0.57
LINC00578-201ENST00000439009 OVOS2A0A0J9YW53 1432 aa11.5□□□□□ -0.57
LINC00578-201ENST00000439009 OVOS2Q6IE36 1432 aa11.5□□□□□ -0.57
LINC00578-201ENST00000439009 NUP188Q5SRE5 1749 aa11.49□□□□□ -0.57
LINC00578-201ENST00000439009 PROM2Q8N271 834 aa11.49□□□□□ -0.57
LINC00578-201ENST00000439009 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
LINC00578-201ENST00000439009 SRPK2P78362 688 aaKnown RBP11.48□□□□□ -0.57
LINC00578-201ENST00000439009 DDB1Q16531 1140 aa11.48□□□□□ -0.57
LINC00578-201ENST00000439009 CDCA7Q9BWT1 371 aaPredicted RBP11.48□□□□□ -0.57
LINC00578-201ENST00000439009 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
LINC00578-201ENST00000439009 CABP1Q9NZU7 370 aa11.48□□□□□ -0.57
LINC00578-201ENST00000439009 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
LINC00578-201ENST00000439009 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
LINC00578-201ENST00000439009 PEAK1Q9H792 1746 aa11.47□□□□□ -0.57
LINC00578-201ENST00000439009 PARP4Q9UKK3 1724 aaKnown RBP11.47□□□□□ -0.57
LINC00578-201ENST00000439009 USP6P35125 1406 aa11.47□□□□□ -0.57
LINC00578-201ENST00000439009 DCAF8L1A6NGE4 600 aa11.47□□□□□ -0.57
LINC00578-201ENST00000439009 NLRP6P59044 892 aa11.47□□□□□ -0.57
LINC00578-201ENST00000439009 PTF1AQ7RTS3 328 aa11.47□□□□□ -0.57
LINC00578-201ENST00000439009 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
LINC00578-201ENST00000439009 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
LINC00578-201ENST00000439009 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
LINC00578-201ENST00000439009 SLIT3O75094 1523 aa11.46□□□□□ -0.57
LINC00578-201ENST00000439009 WDR17Q8IZU2 1322 aa11.46□□□□□ -0.57
LINC00578-201ENST00000439009 PTGER2P43116 358 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms