RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CCDC24Q8N4L8 307 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 AAASQ9NRG9 546 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 EVA1BQ9NVM1 165 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 AP1G2O75843 785 aa7.84□□□□□ -1.15
TRAPPC13-204ENST00000438419 CCNYL3P0C7X3 344 aa7.84□□□□□ -1.15
TRAPPC13-204ENST00000438419 HELBQ8NG08 1087 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC13-204ENST00000438419 F12P00748 615 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC13-204ENST00000438419 LRRN4Q8WUT4 740 aa7.83□□□□□ -1.16
TRAPPC13-204ENST00000438419 KCNH2Q12809 1159 aa7.82□□□□□ -1.16
TRAPPC13-204ENST00000438419 TMEM259Q4ZIN3 620 aa7.82□□□□□ -1.16
TRAPPC13-204ENST00000438419 RPIAP49247 311 aa7.81□□□□□ -1.16
TRAPPC13-204ENST00000438419 MAP10Q9P2G4 905 aa7.81□□□□□ -1.16
TRAPPC13-204ENST00000438419 C11orf95C9JLR9 678 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC13-204ENST00000438419 USP17L8P0C7I0 530 aa7.8□□□□□ -1.16
TRAPPC13-204ENST00000438419 SPRYD7Q5W111 196 aa7.8□□□□□ -1.16
TRAPPC13-204ENST00000438419 ZNF598Q86UK7 904 aaKnown RBP7.8□□□□□ -1.16
TRAPPC13-204ENST00000438419 HMX1Q9NP08 348 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-204ENST00000438419 TNFRSF10AO00220 468 aa7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 CTHP32929 405 aa7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 TRIM32Q13049 653 aa7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 UNC93B1Q9H1C4 597 aa7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 ZBTB24O43167 697 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 BANK1Q8NDB2 785 aa7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 SNRKQ9NRH2 765 aa7.78□□□□□ -1.16
TRAPPC13-204ENST00000438419 CD2BP2O95400 341 aaKnown RBP7.77□□□□□ -1.17
TRAPPC13-204ENST00000438419 SKOR1P84550 965 aa7.77□□□□□ -1.17
TRAPPC13-204ENST00000438419 NR6A1Q15406 480 aa7.76□□□□□ -1.17
TRAPPC13-204ENST00000438419 ZNF697Q5TEC3 545 aa7.76□□□□□ -1.17
TRAPPC13-204ENST00000438419 BAP1Q92560 729 aa7.76□□□□□ -1.17
TRAPPC13-204ENST00000438419 TRIM34Q9BYJ4 488 aa7.76□□□□□ -1.17
TRAPPC13-204ENST00000438419 MTMR14Q8NCE2 650 aa7.75□□□□□ -1.17
TRAPPC13-204ENST00000438419 GJD4Q96KN9 370 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-204ENST00000438419 GMPR2Q9P2T1 348 aaKnown RBP7.75□□□□□ -1.17
TRAPPC13-204ENST00000438419 SH3BP2P78314 561 aa7.73□□□□□ -1.17
TRAPPC13-204ENST00000438419 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
TRAPPC13-204ENST00000438419 PKD2L1Q9P0L9 805 aa7.73□□□□□ -1.17
TRAPPC13-204ENST00000438419 DACH1Q9UI36 760 aa7.73□□□□□ -1.17
TRAPPC13-204ENST00000438419 GTF3C3Q9Y5Q9 886 aa7.73□□□□□ -1.17
TRAPPC13-204ENST00000438419 GDF9O60383 454 aa7.72□□□□□ -1.17
TRAPPC13-204ENST00000438419 SOCS7O14512 581 aa7.71□□□□□ -1.17
TRAPPC13-204ENST00000438419 WNT7BP56706 349 aa7.71□□□□□ -1.17
TRAPPC13-204ENST00000438419 ZNF511Q8NB15 262 aa7.71□□□□□ -1.17
TRAPPC13-204ENST00000438419 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-204ENST00000438419 CRIPAKQ8N1N5 446 aa7.7□□□□□ -1.18
TRAPPC13-204ENST00000438419 FKBPLQ9UIM3 349 aa7.7□□□□□ -1.18
TRAPPC13-204ENST00000438419 WNT7AO00755 349 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 GPR37L1O60883 481 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 FOXC1Q12948 553 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 MCM6Q14566 821 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 ARMC2Q8NEN0 867 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 FOXJ1Q92949 421 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 TERTO14746 1132 aaKnown RBP7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 AXIN1O15169 862 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 SH3BP5LQ7L8J4 393 aa7.69□□□□□ -1.18
TRAPPC13-204ENST00000438419 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
TRAPPC13-204ENST00000438419 OCSTAMPQ9BR26 566 aa7.68□□□□□ -1.18
TRAPPC13-204ENST00000438419 SIAH2O43255 324 aa7.67□□□□□ -1.18
TRAPPC13-204ENST00000438419 NBPF14Q5TI25 921 aa7.67□□□□□ -1.18
TRAPPC13-204ENST00000438419 SH3RF1Q7Z6J0 888 aa7.67□□□□□ -1.18
TRAPPC13-204ENST00000438419 GPKOWQ92917 476 aaPredicted RBP eCLIP7.67□□□□□ -1.18
TRAPPC13-204ENST00000438419 ZC3H4Q9UPT8 1303 aaKnown RBP7.66□□□□□ -1.18
TRAPPC13-204ENST00000438419 PDXDC2PQ6P474 469 aa7.66□□□□□ -1.18
TRAPPC13-204ENST00000438419 ZSCAN1Q8NBB4 408 aa7.65□□□□□ -1.18
TRAPPC13-204ENST00000438419 TOR4AQ9NXH8 423 aa7.65□□□□□ -1.18
TRAPPC13-204ENST00000438419 TBC1D2BQ9UPU7 963 aa7.65□□□□□ -1.18
TRAPPC13-204ENST00000438419 FLIIQ13045 1269 aa7.64□□□□□ -1.19
TRAPPC13-204ENST00000438419 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC13-204ENST00000438419 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
TRAPPC13-204ENST00000438419 NDUFB9Q9Y6M9 179 aa7.64□□□□□ -1.19
TRAPPC13-204ENST00000438419 VARSP26640 1264 aaKnown RBP7.63□□□□□ -1.19
TRAPPC13-204ENST00000438419 C1QTNF2Q9BXJ5 285 aa7.63□□□□□ -1.19
TRAPPC13-204ENST00000438419 AGERQ15109 404 aa7.62□□□□□ -1.19
TRAPPC13-204ENST00000438419 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
TRAPPC13-204ENST00000438419 GDPD2Q9HCC8 539 aa7.62□□□□□ -1.19
TRAPPC13-204ENST00000438419 GPSM3Q9Y4H4 160 aa7.62□□□□□ -1.19
TRAPPC13-204ENST00000438419 MAGEB6P1A0A0J9YX57 407 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 APBB1O00213 710 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 AVPP01185 164 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 PTK2Q05397 1052 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 IRF5Q13568 498 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 CTC1Q2NKJ3 1217 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 CYP4X1Q8N118 509 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 PNMA1Q8ND90 353 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 SNIP1Q8TAD8 396 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 POM121Q96HA1 1249 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 ARHGAP9Q9BRR9 750 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 COG6Q9Y2V7 657 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 J3QL48 77 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 FBXO45P0C2W1 286 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 ERFEQ4G0M1 354 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 CARD14Q9BXL6 1004 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 TLL2Q9Y6L7 1015 aa7.61□□□□□ -1.19
TRAPPC13-204ENST00000438419 SMPD1P17405 629 aa7.6□□□□□ -1.19
TRAPPC13-204ENST00000438419 MPNDQ8N594 471 aa7.6□□□□□ -1.19
TRAPPC13-204ENST00000438419 FAM174AQ8TBP5 190 aa7.6□□□□□ -1.19
TRAPPC13-204ENST00000438419 ADAM32Q8TC27 787 aa7.6□□□□□ -1.19
TRAPPC13-204ENST00000438419 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms