RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SDF4Q9BRK5 362 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 C22orf23Q9BZE7 217 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 GAPVD1Q14C86 1478 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 WWC2Q6AWC2 1192 aa12.42□□□□□ -0.42
SHPRH-206ENST00000438092 CLASRPQ8N2M8 674 aaKnown RBP12.42□□□□□ -0.42
SHPRH-206ENST00000438092 SULT6B1Q6IMI4 303 aa12.42□□□□□ -0.42
SHPRH-206ENST00000438092 GPS2Q13227 327 aa12.42□□□□□ -0.42
SHPRH-206ENST00000438092 GSE1Q14687 1217 aa12.42□□□□□ -0.42
SHPRH-206ENST00000438092 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
SHPRH-206ENST00000438092 HSP90AA2PQ14568 343 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-206ENST00000438092 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
SHPRH-206ENST00000438092 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
SHPRH-206ENST00000438092 RUFY1Q96T51 708 aa12.41□□□□□ -0.42
SHPRH-206ENST00000438092 FKBP4Q02790 459 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHPRH-206ENST00000438092 NUP133Q8WUM0 1156 aa12.41□□□□□ -0.42
SHPRH-206ENST00000438092 CDK19Q9BWU1 502 aa12.4□□□□□ -0.42
SHPRH-206ENST00000438092 FAM13BQ9NYF5 915 aa12.4□□□□□ -0.42
SHPRH-206ENST00000438092 ZC3H6P61129 1189 aaKnown RBP12.4□□□□□ -0.42
SHPRH-206ENST00000438092 EXOSC9Q06265 439 aaKnown RBP12.4□□□□□ -0.42
SHPRH-206ENST00000438092 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
SHPRH-206ENST00000438092 SMG6Q86US8 1419 aaKnown RBP12.4□□□□□ -0.42
SHPRH-206ENST00000438092 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
SHPRH-206ENST00000438092 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.43
SHPRH-206ENST00000438092 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
SHPRH-206ENST00000438092 KIF7Q2M1P5 1343 aa12.39□□□□□ -0.43
SHPRH-206ENST00000438092 SMC2O95347 1197 aa12.39□□□□□ -0.43
SHPRH-206ENST00000438092 SLC3A2P08195 630 aaKnown RBP12.39□□□□□ -0.43
SHPRH-206ENST00000438092 TCP11L2Q8N4U5 519 aa12.39□□□□□ -0.43
SHPRH-206ENST00000438092 HDGFL1Q5TGJ6 251 aa12.39□□□□□ -0.43
SHPRH-206ENST00000438092 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
SHPRH-206ENST00000438092 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
SHPRH-206ENST00000438092 KAT6BQ8WYB5 2073 aa12.38□□□□□ -0.43
SHPRH-206ENST00000438092 CABP1Q9NZU7 370 aa12.38□□□□□ -0.43
SHPRH-206ENST00000438092 CHMP5Q9NZZ3 219 aa12.38□□□□□ -0.43
SHPRH-206ENST00000438092 FGD5Q6ZNL6 1462 aa12.38□□□□□ -0.43
SHPRH-206ENST00000438092 TWISTNBQ3B726 338 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-206ENST00000438092 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-206ENST00000438092 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-206ENST00000438092 PSMA5P28066 241 aa12.38□□□□□ -0.43
SHPRH-206ENST00000438092 ZNF530Q6P9A1 599 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-206ENST00000438092 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
SHPRH-206ENST00000438092 CDC45O75419 566 aa12.38□□□□□ -0.43
SHPRH-206ENST00000438092 ATAD2BQ9ULI0 1458 aa12.37□□□□□ -0.43
SHPRH-206ENST00000438092 NEK4P51957 841 aa12.37□□□□□ -0.43
SHPRH-206ENST00000438092 MPNDQ8N594 471 aa12.37□□□□□ -0.43
SHPRH-206ENST00000438092 MNS1Q8NEH6 495 aa12.37□□□□□ -0.43
SHPRH-206ENST00000438092 CNTLNQ9NXG0 1405 aa12.37□□□□□ -0.43
SHPRH-206ENST00000438092 MATR3P43243 847 aaKnown RBP eCLIP12.36□□□□□ -0.435e-6■■■□□ 17.1
SHPRH-206ENST00000438092 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
SHPRH-206ENST00000438092 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.36□□□□□ -0.43
SHPRH-206ENST00000438092 WASHC2AQ641Q2 1341 aa12.36□□□□□ -0.43
SHPRH-206ENST00000438092 MPHOSPH10O00566 681 aaKnown RBP12.36□□□□□ -0.43
SHPRH-206ENST00000438092 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
SHPRH-206ENST00000438092 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
SHPRH-206ENST00000438092 ADAMTS2O95450 1211 aa12.36□□□□□ -0.43
SHPRH-206ENST00000438092 NBPF1Q3BBV0 1214 aa12.36□□□□□ -0.43
SHPRH-206ENST00000438092 MYOM3Q5VTT5 1437 aa12.36□□□□□ -0.43
SHPRH-206ENST00000438092 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
SHPRH-206ENST00000438092 DHX37Q8IY37 1157 aaKnown RBP12.36□□□□□ -0.43
SHPRH-206ENST00000438092 FIBPO43427 364 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 SPC24Q8NBT2 197 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 SYCP1Q15431 976 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
SHPRH-206ENST00000438092 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
SHPRH-206ENST00000438092 GNAI2P04899 355 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 NUCB2P80303 420 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 USP5P45974 858 aa12.35□□□□□ -0.43
SHPRH-206ENST00000438092 BCAR3O75815 825 aa12.34□□□□□ -0.43
SHPRH-206ENST00000438092 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
SHPRH-206ENST00000438092 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
SHPRH-206ENST00000438092 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
SHPRH-206ENST00000438092 CCDC69A6NI79 296 aa12.34□□□□□ -0.43
SHPRH-206ENST00000438092 PDCL3Q9H2J4 239 aa12.34□□□□□ -0.43
SHPRH-206ENST00000438092 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
SHPRH-206ENST00000438092 GNAI3P08754 354 aa12.34□□□□□ -0.43
SHPRH-206ENST00000438092 AK7Q96M32 723 aa12.34□□□□□ -0.43
SHPRH-206ENST00000438092 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
SHPRH-206ENST00000438092 CCDC7Q96M83 1385 aa12.33□□□□□ -0.43
SHPRH-206ENST00000438092 TRIM5Q9C035 493 aa12.33□□□□□ -0.44
SHPRH-206ENST00000438092 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
SHPRH-206ENST00000438092 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
SHPRH-206ENST00000438092 TXLNAP40222 546 aa12.33□□□□□ -0.44
SHPRH-206ENST00000438092 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
SHPRH-206ENST00000438092 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.445e-7■■■■□ 19.8
SHPRH-206ENST00000438092 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
SHPRH-206ENST00000438092 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
SHPRH-206ENST00000438092 SEPT11Q9NVA2 429 aaKnown RBP12.32□□□□□ -0.44
SHPRH-206ENST00000438092 ANKRD50Q9ULJ7 1429 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 STK38Q15208 465 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 TDO2P48775 406 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 THEMISQ8N1K5 641 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-206ENST00000438092 ABCF2Q9UG63 623 aa12.32□□□□□ -0.44
SHPRH-206ENST00000438092 AACSQ86V21 672 aa12.31□□□□□ -0.44
SHPRH-206ENST00000438092 USHBP1Q8N6Y0 703 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms