RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 GDPD2Q9HCC8 539 aa16.13■□□□□ 0.17
KDM4C-206ENST00000438023 CERS3Q8IU89 383 aa16.12■□□□□ 0.17
KDM4C-206ENST00000438023 KDM6BO15054 1643 aa16.12■□□□□ 0.17
KDM4C-206ENST00000438023 USP8P40818 1118 aa16.12■□□□□ 0.17
KDM4C-206ENST00000438023 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
KDM4C-206ENST00000438023 PES1O00541 588 aaKnown RBP16.11■□□□□ 0.17
KDM4C-206ENST00000438023 SOX12O15370 315 aa16.11■□□□□ 0.17
KDM4C-206ENST00000438023 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.11■□□□□ 0.17
KDM4C-206ENST00000438023 V9GYY5 206 aaPredicted RBP16.11■□□□□ 0.17
KDM4C-206ENST00000438023 SMC2O95347 1197 aa16.11■□□□□ 0.17
KDM4C-206ENST00000438023 HS1BP3Q53T59 392 aa16.11■□□□□ 0.17
KDM4C-206ENST00000438023 TCP11L2Q8N4U5 519 aa16.11■□□□□ 0.17
KDM4C-206ENST00000438023 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
KDM4C-206ENST00000438023 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
KDM4C-206ENST00000438023 CCDC73Q6ZRK6 1079 aa16.11■□□□□ 0.17
KDM4C-206ENST00000438023 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
KDM4C-206ENST00000438023 TRMT1Q9NXH9 659 aaKnown RBP16.1■□□□□ 0.17
KDM4C-206ENST00000438023 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 TERF1P54274 439 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 TTLL5Q6EMB2 1281 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
KDM4C-206ENST00000438023 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 RUNDC1Q96C34 613 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 CDK13Q14004 1512 aaKnown RBP16.1■□□□□ 0.17
KDM4C-206ENST00000438023 PDILTQ8N807 584 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 GIMAP7Q8NHV1 300 aa16.1■□□□□ 0.17
KDM4C-206ENST00000438023 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
KDM4C-206ENST00000438023 FOSBP53539 338 aa16.09■□□□□ 0.17
KDM4C-206ENST00000438023 RUFY1Q96T51 708 aa16.09■□□□□ 0.17
KDM4C-206ENST00000438023 PLEKHH1Q9ULM0 1364 aa16.09■□□□□ 0.17
KDM4C-206ENST00000438023 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
KDM4C-206ENST00000438023 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
KDM4C-206ENST00000438023 CCDC70Q6NSX1 233 aa16.09■□□□□ 0.17
KDM4C-206ENST00000438023 CENPHQ9H3R5 247 aa16.09■□□□□ 0.17
KDM4C-206ENST00000438023 WDR33Q9C0J8 1336 aaKnown RBP16.09■□□□□ 0.17
KDM4C-206ENST00000438023 PER1O15534 1290 aaPredicted RBP16.08■□□□□ 0.17
KDM4C-206ENST00000438023 LMAN1P49257 510 aa16.08■□□□□ 0.16
KDM4C-206ENST00000438023 MCM2P49736 904 aa16.08■□□□□ 0.16
KDM4C-206ENST00000438023 MVPQ14764 893 aaKnown RBP16.08■□□□□ 0.16
KDM4C-206ENST00000438023 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
KDM4C-206ENST00000438023 TNMDQ9H2S6 317 aa16.08■□□□□ 0.16
KDM4C-206ENST00000438023 TCOF1Q13428 1488 aaKnown RBP16.08■□□□□ 0.16
KDM4C-206ENST00000438023 PLCD4Q9BRC7 762 aa16.08■□□□□ 0.16
KDM4C-206ENST00000438023 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
KDM4C-206ENST00000438023 EPRSP07814 1512 aaKnown RBP16.07■□□□□ 0.16
KDM4C-206ENST00000438023 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
KDM4C-206ENST00000438023 LRSAM1Q6UWE0 723 aa16.07■□□□□ 0.16
KDM4C-206ENST00000438023 CHD1LQ86WJ1 897 aa16.07■□□□□ 0.16
KDM4C-206ENST00000438023 DMTNQ08495 405 aa16.07■□□□□ 0.16
KDM4C-206ENST00000438023 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
KDM4C-206ENST00000438023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
KDM4C-206ENST00000438023 FEZ1Q99689 392 aa16.06■□□□□ 0.16
KDM4C-206ENST00000438023 OGFRQ9NZT2 677 aa16.06■□□□□ 0.16
KDM4C-206ENST00000438023 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
KDM4C-206ENST00000438023 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
KDM4C-206ENST00000438023 STK31Q9BXU1 1019 aa16.06■□□□□ 0.16
KDM4C-206ENST00000438023 MNAT1P51948 309 aa16.06■□□□□ 0.16
KDM4C-206ENST00000438023 HNRNPMP52272 730 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■■■□ 24.8
KDM4C-206ENST00000438023 RALGAPBQ86X10 1494 aa16.05■□□□□ 0.16
KDM4C-206ENST00000438023 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
KDM4C-206ENST00000438023 KIAA0754O94854 1291 aa16.05■□□□□ 0.16
KDM4C-206ENST00000438023 TPM1P09493 284 aa16.05■□□□□ 0.16
KDM4C-206ENST00000438023 ERCC4Q92889 916 aaPredicted RBP16.05■□□□□ 0.16
KDM4C-206ENST00000438023 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
KDM4C-206ENST00000438023 RIPK4P57078 832 aa16.04■□□□□ 0.16
KDM4C-206ENST00000438023 MYRIPQ8NFW9 859 aa16.04■□□□□ 0.16
KDM4C-206ENST00000438023 CAMK4Q16566 473 aa16.04■□□□□ 0.16
KDM4C-206ENST00000438023 C17orf53Q8N3J3 647 aaPredicted RBP16.04■□□□□ 0.16
KDM4C-206ENST00000438023 RBSNQ9H1K0 784 aa16.04■□□□□ 0.16
KDM4C-206ENST00000438023 FSD2A1L4K1 749 aa16.04■□□□□ 0.16
KDM4C-206ENST00000438023 EIF3JO75822 258 aaKnown RBP16.04■□□□□ 0.16
KDM4C-206ENST00000438023 CT47B1P0C2W7 299 aaPredicted RBP16.04■□□□□ 0.16
KDM4C-206ENST00000438023 CDR1P51861 262 aa16.04■□□□□ 0.16
KDM4C-206ENST00000438023 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
KDM4C-206ENST00000438023 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
KDM4C-206ENST00000438023 CCDC34Q96HJ3 373 aa16.03■□□□□ 0.16
KDM4C-206ENST00000438023 URI1O94763 535 aaPredicted RBP16.03■□□□□ 0.16
KDM4C-206ENST00000438023 TSR1Q2NL82 804 aaKnown RBP16.03■□□□□ 0.16
KDM4C-206ENST00000438023 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
KDM4C-206ENST00000438023 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
KDM4C-206ENST00000438023 RASSF4Q9H2L5 321 aa16.03■□□□□ 0.16
KDM4C-206ENST00000438023 ANTXR1Q9H6X2 564 aa16.03■□□□□ 0.16
KDM4C-206ENST00000438023 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
KDM4C-206ENST00000438023 NUP62CLQ9H1M0 184 aa16.03■□□□□ 0.16
KDM4C-206ENST00000438023 USP19O94966 1318 aa16.02■□□□□ 0.16
KDM4C-206ENST00000438023 NKTRP30414 1462 aaKnown RBP16.02■□□□□ 0.16
KDM4C-206ENST00000438023 GAS2L3Q86XJ1 694 aa16.02■□□□□ 0.16
KDM4C-206ENST00000438023 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
KDM4C-206ENST00000438023 KINO60870 393 aaKnown RBP16.02■□□□□ 0.15
KDM4C-206ENST00000438023 CCDC183Q5T5S1 534 aa16.02■□□□□ 0.15
KDM4C-206ENST00000438023 API5Q9BZZ5 524 aaKnown RBP16.02■□□□□ 0.15
KDM4C-206ENST00000438023 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.15
KDM4C-206ENST00000438023 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.15
KDM4C-206ENST00000438023 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.15
KDM4C-206ENST00000438023 DISP3Q9P2K9 1392 aa16.01■□□□□ 0.15
KDM4C-206ENST00000438023 UPF3BQ9BZI7 483 aaKnown RBP16.01■□□□□ 0.15
KDM4C-206ENST00000438023 STK26Q9P289 416 aa16.01■□□□□ 0.15
KDM4C-206ENST00000438023 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
KDM4C-206ENST00000438023 GCC1Q96CN9 775 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms