RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
LINC00271-202ENST00000436554 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
LINC00271-202ENST00000436554 TRIM37O94972 964 aa17.11■□□□□ 0.33
LINC00271-202ENST00000436554 CHRNA2Q15822 529 aa17.1■□□□□ 0.33
LINC00271-202ENST00000436554 CAMKK2Q96RR4 588 aa17.1■□□□□ 0.33
LINC00271-202ENST00000436554 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
LINC00271-202ENST00000436554 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
LINC00271-202ENST00000436554 KDM2AQ9Y2K7 1162 aa17.09■□□□□ 0.33
LINC00271-202ENST00000436554 ABCA3Q99758 1704 aa17.08■□□□□ 0.32
LINC00271-202ENST00000436554 SPATA31A1Q5TZJ5 1347 aa17.08■□□□□ 0.32
LINC00271-202ENST00000436554 APBA3O96018 575 aa17.08■□□□□ 0.32
LINC00271-202ENST00000436554 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
LINC00271-202ENST00000436554 ZC3H6P61129 1189 aaKnown RBP17.07■□□□□ 0.32
LINC00271-202ENST00000436554 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
LINC00271-202ENST00000436554 DISP2A7MBM2 1401 aa17.06■□□□□ 0.32
LINC00271-202ENST00000436554 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
LINC00271-202ENST00000436554 COL14A1Q05707 1796 aaKnown RBP17.05■□□□□ 0.32
LINC00271-202ENST00000436554 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
LINC00271-202ENST00000436554 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
LINC00271-202ENST00000436554 EVA1CP58658 441 aa17.05■□□□□ 0.32
LINC00271-202ENST00000436554 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
LINC00271-202ENST00000436554 TRPM3Q9HCF6 1732 aaPredicted RBP17.04■□□□□ 0.32
LINC00271-202ENST00000436554 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
LINC00271-202ENST00000436554 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
LINC00271-202ENST00000436554 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
LINC00271-202ENST00000436554 ALS2Q96Q42 1657 aa17.02■□□□□ 0.32
LINC00271-202ENST00000436554 ADGRB1O14514 1584 aa17.02■□□□□ 0.31
LINC00271-202ENST00000436554 ADGRB2O60241 1585 aa17.02■□□□□ 0.31
LINC00271-202ENST00000436554 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
LINC00271-202ENST00000436554 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
LINC00271-202ENST00000436554 TULP4Q9NRJ4 1543 aa17.01■□□□□ 0.31
LINC00271-202ENST00000436554 NBPF8Q3BBV2 869 aa17■□□□□ 0.31
LINC00271-202ENST00000436554 NBPF14Q5TI25 921 aa17■□□□□ 0.31
LINC00271-202ENST00000436554 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
LINC00271-202ENST00000436554 CDK19Q9BWU1 502 aa17■□□□□ 0.31
LINC00271-202ENST00000436554 THSD7AQ9UPZ6 1657 aa17■□□□□ 0.31
LINC00271-202ENST00000436554 YY1P25490 414 aa16.98■□□□□ 0.31
LINC00271-202ENST00000436554 TCP11L2Q8N4U5 519 aa16.98■□□□□ 0.31
LINC00271-202ENST00000436554 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
LINC00271-202ENST00000436554 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
LINC00271-202ENST00000436554 ACEP12821 1306 aa16.96■□□□□ 0.31
LINC00271-202ENST00000436554 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
LINC00271-202ENST00000436554 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
LINC00271-202ENST00000436554 TNS1Q9HBL0 1735 aaKnown RBP16.96■□□□□ 0.3
LINC00271-202ENST00000436554 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
LINC00271-202ENST00000436554 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
LINC00271-202ENST00000436554 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
LINC00271-202ENST00000436554 RAB3GAP2Q9H2M9 1393 aa16.93■□□□□ 0.3
LINC00271-202ENST00000436554 KCNQ2O43526 872 aa16.93■□□□□ 0.3
LINC00271-202ENST00000436554 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
LINC00271-202ENST00000436554 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
LINC00271-202ENST00000436554 ATP7BP35670 1465 aa16.93■□□□□ 0.3
LINC00271-202ENST00000436554 THRAP3Q9Y2W1 955 aaKnown RBP16.92■□□□□ 0.3
LINC00271-202ENST00000436554 CAMTA1Q9Y6Y1 1673 aa16.91■□□□□ 0.3
LINC00271-202ENST00000436554 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
LINC00271-202ENST00000436554 GCP02774 474 aa16.91■□□□□ 0.3
LINC00271-202ENST00000436554 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
LINC00271-202ENST00000436554 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
LINC00271-202ENST00000436554 CPDO75976 1380 aa16.89■□□□□ 0.29
LINC00271-202ENST00000436554 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
LINC00271-202ENST00000436554 USP19O94966 1318 aa16.88■□□□□ 0.29
LINC00271-202ENST00000436554 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
LINC00271-202ENST00000436554 PLSCR1O15162 318 aa16.86■□□□□ 0.29
LINC00271-202ENST00000436554 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
LINC00271-202ENST00000436554 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
LINC00271-202ENST00000436554 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
LINC00271-202ENST00000436554 PTF1AQ7RTS3 328 aa16.85■□□□□ 0.29
LINC00271-202ENST00000436554 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
LINC00271-202ENST00000436554 NLRP6P59044 892 aa16.83■□□□□ 0.28
LINC00271-202ENST00000436554 DDB1Q16531 1140 aa16.83■□□□□ 0.28
LINC00271-202ENST00000436554 PROM2Q8N271 834 aa16.83■□□□□ 0.28
LINC00271-202ENST00000436554 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
LINC00271-202ENST00000436554 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
LINC00271-202ENST00000436554 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
LINC00271-202ENST00000436554 ITSN1Q15811 1721 aa16.82■□□□□ 0.28
LINC00271-202ENST00000436554 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
LINC00271-202ENST00000436554 RREB1Q92766 1687 aa16.82■□□□□ 0.28
LINC00271-202ENST00000436554 COL5A2P05997 1499 aaPredicted RBP16.82■□□□□ 0.28
LINC00271-202ENST00000436554 NINLQ9Y2I6 1382 aa16.82■□□□□ 0.28
LINC00271-202ENST00000436554 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
LINC00271-202ENST00000436554 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
LINC00271-202ENST00000436554 ARHGEF28Q8N1W1 1705 aaKnown RBP16.82■□□□□ 0.28
LINC00271-202ENST00000436554 CRB1P82279 1406 aa16.81■□□□□ 0.28
LINC00271-202ENST00000436554 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
LINC00271-202ENST00000436554 PPIP5K1Q6PFW1 1433 aa16.8■□□□□ 0.28
LINC00271-202ENST00000436554 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
LINC00271-202ENST00000436554 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
LINC00271-202ENST00000436554 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
LINC00271-202ENST00000436554 LMO7Q8WWI1 1683 aa16.8■□□□□ 0.28
LINC00271-202ENST00000436554 OVOS2A0A0G2JMS6 1433 aa16.79■□□□□ 0.28
LINC00271-202ENST00000436554 OVOS2A0A0J9YW53 1432 aa16.79■□□□□ 0.28
LINC00271-202ENST00000436554 OVOS2Q6IE36 1432 aa16.79■□□□□ 0.28
LINC00271-202ENST00000436554 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
LINC00271-202ENST00000436554 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
LINC00271-202ENST00000436554 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
LINC00271-202ENST00000436554 BRD4O60885 1362 aaPredicted RBP16.77■□□□□ 0.27
LINC00271-202ENST00000436554 PTGER2P43116 358 aa16.76■□□□□ 0.27
LINC00271-202ENST00000436554 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
LINC00271-202ENST00000436554 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
LINC00271-202ENST00000436554 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms