RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 SYMPKQ92797 1274 aaKnown RBP8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 SPSB2Q99619 263 aa8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 RNF223E7ERA6 249 aa8.15□□□□□ -1.1
HMGB1P45-201ENST00000435986 GGCXP38435 758 aa8.15□□□□□ -1.1
HMGB1P45-201ENST00000435986 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
HMGB1P45-201ENST00000435986 LYPD8Q6UX82 237 aa8.14□□□□□ -1.11
HMGB1P45-201ENST00000435986 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P45-201ENST00000435986 SLC6A16Q9GZN6 736 aa8.14□□□□□ -1.11
HMGB1P45-201ENST00000435986 POM121CA8CG34 1229 aa8.13□□□□□ -1.11
HMGB1P45-201ENST00000435986 PPEF1O14829 653 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P45-201ENST00000435986 IRF5Q13568 498 aa8.13□□□□□ -1.11
HMGB1P45-201ENST00000435986 NR6A1Q15406 480 aa8.13□□□□□ -1.11
HMGB1P45-201ENST00000435986 ARMC2Q8NEN0 867 aa8.13□□□□□ -1.11
HMGB1P45-201ENST00000435986 EMID1Q96A84 441 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P45-201ENST00000435986 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 VAC14Q08AM6 782 aa8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 MSS51Q4VC12 460 aa8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 ANKLE1Q8NAG6 615 aa8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 PODXL2Q9NZ53 605 aa8.12□□□□□ -1.11
HMGB1P45-201ENST00000435986 PTPRNQ16849 979 aa8.11□□□□□ -1.11
HMGB1P45-201ENST00000435986 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P45-201ENST00000435986 JUNDP17535 347 aa8.1□□□□□ -1.11
HMGB1P45-201ENST00000435986 PBXIP1Q96AQ6 731 aa8.1□□□□□ -1.11
HMGB1P45-201ENST00000435986 V9GY48 417 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P45-201ENST00000435986 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P45-201ENST00000435986 CTHP32929 405 aa8.09□□□□□ -1.11
HMGB1P45-201ENST00000435986 PLA2G2CQ5R387 149 aa8.09□□□□□ -1.11
HMGB1P45-201ENST00000435986 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
HMGB1P45-201ENST00000435986 FKBPLQ9UIM3 349 aa8.09□□□□□ -1.11
HMGB1P45-201ENST00000435986 PATL2C9JE40 543 aaKnown RBP8.08□□□□□ -1.12
HMGB1P45-201ENST00000435986 NR1H3Q13133 447 aa8.08□□□□□ -1.12
HMGB1P45-201ENST00000435986 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
HMGB1P45-201ENST00000435986 ZBBXA8MT70 800 aa8.07□□□□□ -1.12
HMGB1P45-201ENST00000435986 CSB-PGBD3P0DP91 1061 aa8.07□□□□□ -1.12
HMGB1P45-201ENST00000435986 MMP16P51512 607 aa8.07□□□□□ -1.12
HMGB1P45-201ENST00000435986 MCCD1P59942 119 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P45-201ENST00000435986 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
HMGB1P45-201ENST00000435986 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
HMGB1P45-201ENST00000435986 ALG2Q9H553 416 aa8.07□□□□□ -1.12
HMGB1P45-201ENST00000435986 LCE2BO14633 110 aa8.06□□□□□ -1.12
HMGB1P45-201ENST00000435986 CCNYL3P0C7X3 344 aa8.06□□□□□ -1.12
HMGB1P45-201ENST00000435986 NBPF14Q5TI25 921 aa8.06□□□□□ -1.12
HMGB1P45-201ENST00000435986 LIAT1Q6ZQX7 453 aa8.06□□□□□ -1.12
HMGB1P45-201ENST00000435986 GPSM3Q9Y4H4 160 aa8.06□□□□□ -1.12
HMGB1P45-201ENST00000435986 DXOO77932 396 aaKnown RBP8.05□□□□□ -1.12
HMGB1P45-201ENST00000435986 RFX1P22670 979 aa8.05□□□□□ -1.12
HMGB1P45-201ENST00000435986 PTK2Q05397 1052 aa8.05□□□□□ -1.12
HMGB1P45-201ENST00000435986 TRIM26Q12899 539 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P45-201ENST00000435986 FCF1Q9Y324 198 aaKnown RBP8.05□□□□□ -1.12
HMGB1P45-201ENST00000435986 LMOD1P29536 600 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P45-201ENST00000435986 SLC19A1P41440 591 aa8.04□□□□□ -1.12
HMGB1P45-201ENST00000435986 RETREG2Q8NC44 543 aa8.04□□□□□ -1.12
HMGB1P45-201ENST00000435986 NUDT12Q9BQG2 462 aa8.04□□□□□ -1.12
HMGB1P45-201ENST00000435986 PALM3A6NDB9 673 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P45-201ENST00000435986 F12P00748 615 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P45-201ENST00000435986 EVA1BQ9NVM1 165 aa8.03□□□□□ -1.12
HMGB1P45-201ENST00000435986 GFRA3O60609 400 aa8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 GPR37L1O60883 481 aa8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 KCNH2Q12809 1159 aa8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 SPRYD7Q5W111 196 aa8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 PDXDC2PQ6P474 469 aa8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 ADAMTS19Q8TE59 1207 aa8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 TFIP11Q9UBB9 837 aaKnown RBP8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
HMGB1P45-201ENST00000435986 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
HMGB1P45-201ENST00000435986 AEBP1Q8IUX7 1158 aa8.01□□□□□ -1.13
HMGB1P45-201ENST00000435986 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
HMGB1P45-201ENST00000435986 CCDC9Q9Y3X0 531 aaKnown RBP8.01□□□□□ -1.13
HMGB1P45-201ENST00000435986 ATP9BO43861 1147 aa8□□□□□ -1.13
HMGB1P45-201ENST00000435986 FBXO45P0C2W1 286 aa8□□□□□ -1.13
HMGB1P45-201ENST00000435986 CFAP70Q5T0N1 1121 aa8□□□□□ -1.13
HMGB1P45-201ENST00000435986 ZNF598Q86UK7 904 aaKnown RBP8□□□□□ -1.13
HMGB1P45-201ENST00000435986 MAP10Q9P2G4 905 aa8□□□□□ -1.13
HMGB1P45-201ENST00000435986 RPIAP49247 311 aa7.99□□□□□ -1.13
HMGB1P45-201ENST00000435986 SLFNL1Q499Z3 407 aa7.99□□□□□ -1.13
HMGB1P45-201ENST00000435986 Q6ZNB5 142 aa7.99□□□□□ -1.13
HMGB1P45-201ENST00000435986 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
HMGB1P45-201ENST00000435986 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P45-201ENST00000435986 LZTS3O60299 673 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P45-201ENST00000435986 ZBTB33Q86T24 672 aa7.98□□□□□ -1.13
HMGB1P45-201ENST00000435986 CCDC24Q8N4L8 307 aa7.98□□□□□ -1.13
HMGB1P45-201ENST00000435986 ARHGAP9Q9BRR9 750 aa7.98□□□□□ -1.13
HMGB1P45-201ENST00000435986 ZNF697Q5TEC3 545 aa7.97□□□□□ -1.13
HMGB1P45-201ENST00000435986 B4GALNT3Q6L9W6 998 aa7.97□□□□□ -1.13
HMGB1P45-201ENST00000435986 PCDHB9Q9Y5E1 797 aa7.97□□□□□ -1.13
HMGB1P45-201ENST00000435986 MAFBQ9Y5Q3 323 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P45-201ENST00000435986 ATG7O95352 703 aa7.96□□□□□ -1.14
HMGB1P45-201ENST00000435986 SKIP12755 728 aa7.96□□□□□ -1.14
HMGB1P45-201ENST00000435986 PDZRN3Q9UPQ7 1066 aa7.96□□□□□ -1.14
HMGB1P45-201ENST00000435986 NRG2O14511 850 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 GDF9O60383 454 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 PRR20EP86478 221 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 PRR20CP86479 221 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 PRR20DP86480 221 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 PRR20BP86481 221 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 PRR20AP86496 221 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms