RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 TRPC5Q9UL62 973 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC4-202ENST00000434101 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-202ENST00000434101 CABLES1Q8TDN4 633 aa18.74■□□□□ 0.59
TRAPPC4-202ENST00000434101 SBNO2Q9Y2G9 1366 aa18.73■□□□□ 0.59
TRAPPC4-202ENST00000434101 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
TRAPPC4-202ENST00000434101 TIMELESSQ9UNS1 1208 aa18.72■□□□□ 0.59
TRAPPC4-202ENST00000434101 NWD2Q9ULI1 1742 aa18.71■□□□□ 0.59
TRAPPC4-202ENST00000434101 CRYBG1Q9Y4K1 1723 aa18.71■□□□□ 0.59
TRAPPC4-202ENST00000434101 ATRNO75882 1429 aa18.71■□□□□ 0.59
TRAPPC4-202ENST00000434101 BCL9LQ86UU0 1499 aa18.71■□□□□ 0.59
TRAPPC4-202ENST00000434101 BRD4O60885 1362 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC4-202ENST00000434101 SLIT2O94813 1529 aa18.7■□□□□ 0.58
TRAPPC4-202ENST00000434101 PLCH1Q4KWH8 1693 aa18.7■□□□□ 0.58
TRAPPC4-202ENST00000434101 ATAD2Q6PL18 1390 aa18.69■□□□□ 0.58
TRAPPC4-202ENST00000434101 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
TRAPPC4-202ENST00000434101 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
TRAPPC4-202ENST00000434101 COL14A1Q05707 1796 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-202ENST00000434101 PHRF1Q9P1Y6 1649 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-202ENST00000434101 AKAP12Q02952 1782 aa18.66■□□□□ 0.58
TRAPPC4-202ENST00000434101 ABTB2Q8N961 1025 aa18.66■□□□□ 0.58
TRAPPC4-202ENST00000434101 RGS12O14924 1447 aa18.66■□□□□ 0.58
TRAPPC4-202ENST00000434101 USP6P35125 1406 aa18.66■□□□□ 0.58
TRAPPC4-202ENST00000434101 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
TRAPPC4-202ENST00000434101 FAM83GA6ND36 823 aa18.64■□□□□ 0.57
TRAPPC4-202ENST00000434101 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC4-202ENST00000434101 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC4-202ENST00000434101 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC4-202ENST00000434101 NUTM2GQ5VZR2 741 aa18.63■□□□□ 0.57
TRAPPC4-202ENST00000434101 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
TRAPPC4-202ENST00000434101 PRDM11Q9NQV5 511 aa18.62■□□□□ 0.57
TRAPPC4-202ENST00000434101 NRAPQ86VF7 1730 aa18.62■□□□□ 0.57
TRAPPC4-202ENST00000434101 VPS72Q15906 364 aa18.61■□□□□ 0.57
TRAPPC4-202ENST00000434101 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
TRAPPC4-202ENST00000434101 USP19O94966 1318 aa18.6■□□□□ 0.57
TRAPPC4-202ENST00000434101 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
TRAPPC4-202ENST00000434101 GLI3P10071 1580 aa18.59■□□□□ 0.57
TRAPPC4-202ENST00000434101 NRKQ7Z2Y5 1582 aa18.59■□□□□ 0.57
TRAPPC4-202ENST00000434101 BTG4Q9NY30 223 aa18.59■□□□□ 0.57
TRAPPC4-202ENST00000434101 CCDC9Q9Y3X0 531 aaKnown RBP18.59■□□□□ 0.57
TRAPPC4-202ENST00000434101 MON2Q7Z3U7 1717 aa18.59■□□□□ 0.57
TRAPPC4-202ENST00000434101 CPSF1Q10570 1443 aaKnown RBP18.58■□□□□ 0.57
TRAPPC4-202ENST00000434101 SSH2Q76I76 1423 aa18.58■□□□□ 0.57
TRAPPC4-202ENST00000434101 KIAA0232Q92628 1395 aa18.58■□□□□ 0.57
TRAPPC4-202ENST00000434101 USP47Q96K76 1375 aa18.58■□□□□ 0.57
TRAPPC4-202ENST00000434101 TESK2Q96S53 571 aa18.58■□□□□ 0.56
TRAPPC4-202ENST00000434101 KTN1Q86UP2 1357 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-202ENST00000434101 PIK3C2AO00443 1686 aa18.57■□□□□ 0.56
TRAPPC4-202ENST00000434101 TTC21AQ8NDW8 1320 aa18.57■□□□□ 0.56
TRAPPC4-202ENST00000434101 NLRP6P59044 892 aa18.57■□□□□ 0.56
TRAPPC4-202ENST00000434101 ZC3H6P61129 1189 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-202ENST00000434101 TMC1Q8TDI8 760 aa18.57■□□□□ 0.56
TRAPPC4-202ENST00000434101 TTC21BQ7Z4L5 1316 aa18.56■□□□□ 0.56
TRAPPC4-202ENST00000434101 GCP02774 474 aa18.55■□□□□ 0.56
TRAPPC4-202ENST00000434101 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-202ENST00000434101 UPF1Q92900 1129 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRAPPC4-202ENST00000434101 CPDO75976 1380 aa18.55■□□□□ 0.56
TRAPPC4-202ENST00000434101 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
TRAPPC4-202ENST00000434101 CHRNA2Q15822 529 aa18.54■□□□□ 0.56
TRAPPC4-202ENST00000434101 SLIT3O75094 1523 aa18.54■□□□□ 0.56
TRAPPC4-202ENST00000434101 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
TRAPPC4-202ENST00000434101 TMF1P82094 1093 aa18.53■□□□□ 0.56
TRAPPC4-202ENST00000434101 TERF2IPQ9NYB0 399 aa18.53■□□□□ 0.56
TRAPPC4-202ENST00000434101 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.56
TRAPPC4-202ENST00000434101 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.55
TRAPPC4-202ENST00000434101 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
TRAPPC4-202ENST00000434101 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC4-202ENST00000434101 CDCA8Q53HL2 280 aa18.5■□□□□ 0.55
TRAPPC4-202ENST00000434101 SEPT12Q8IYM1 358 aa18.5■□□□□ 0.55
TRAPPC4-202ENST00000434101 KCNH5Q8NCM2 988 aa18.5■□□□□ 0.55
TRAPPC4-202ENST00000434101 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
TRAPPC4-202ENST00000434101 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
TRAPPC4-202ENST00000434101 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
TRAPPC4-202ENST00000434101 EVA1CP58658 441 aa18.49■□□□□ 0.55
TRAPPC4-202ENST00000434101 STRN4Q9NRL3 753 aa18.49■□□□□ 0.55
TRAPPC4-202ENST00000434101 USP54Q70EL1 1684 aa18.49■□□□□ 0.55
TRAPPC4-202ENST00000434101 CAMTA1Q9Y6Y1 1673 aa18.48■□□□□ 0.55
TRAPPC4-202ENST00000434101 A0A1W2PP64 1363 aa18.48■□□□□ 0.55
TRAPPC4-202ENST00000434101 A0A0G2JS52 829 aa18.48■□□□□ 0.55
TRAPPC4-202ENST00000434101 MYT1Q01538 1121 aa18.48■□□□□ 0.55
TRAPPC4-202ENST00000434101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRAPPC4-202ENST00000434101 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
TRAPPC4-202ENST00000434101 USP31Q70CQ4 1352 aa18.46■□□□□ 0.55
TRAPPC4-202ENST00000434101 ZBTB7CA1YPR0 619 aa18.46■□□□□ 0.55
TRAPPC4-202ENST00000434101 FAM98CQ17RN3 349 aaKnown RBP18.46■□□□□ 0.55
TRAPPC4-202ENST00000434101 SPATA31A1Q5TZJ5 1347 aa18.46■□□□□ 0.55
TRAPPC4-202ENST00000434101 COL18A1P39060 1754 aa18.45■□□□□ 0.54
TRAPPC4-202ENST00000434101 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
TRAPPC4-202ENST00000434101 NME9Q86XW9 330 aa18.44■□□□□ 0.54
TRAPPC4-202ENST00000434101 COL5A2P05997 1499 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC4-202ENST00000434101 THSD7AQ9UPZ6 1657 aa18.44■□□□□ 0.54
TRAPPC4-202ENST00000434101 ANKRD36BQ8N2N9 1353 aa18.43■□□□□ 0.54
TRAPPC4-202ENST00000434101 NFAT5O94916 1531 aa18.43■□□□□ 0.54
TRAPPC4-202ENST00000434101 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
TRAPPC4-202ENST00000434101 SOX12O15370 315 aa18.42■□□□□ 0.54
TRAPPC4-202ENST00000434101 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
TRAPPC4-202ENST00000434101 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
TRAPPC4-202ENST00000434101 LTN1O94822 1766 aa18.41■□□□□ 0.54
TRAPPC4-202ENST00000434101 ABCC6O95255 1503 aa18.41■□□□□ 0.54
TRAPPC4-202ENST00000434101 EIF4G2P78344 907 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRAPPC4-202ENST00000434101 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms