RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 STARD3NLO95772 234 aa16.06■□□□□ 0.16
CDK12-201ENST00000430627 PTCD1O75127 700 aaKnown RBP16.06■□□□□ 0.16
CDK12-201ENST00000430627 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
CDK12-201ENST00000430627 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
CDK12-201ENST00000430627 EXOC5O00471 708 aa16.05■□□□□ 0.16
CDK12-201ENST00000430627 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
CDK12-201ENST00000430627 PSMD1Q99460 953 aa16.05■□□□□ 0.16
CDK12-201ENST00000430627 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
CDK12-201ENST00000430627 FSD1Q9BTV5 496 aa16.05■□□□□ 0.16
CDK12-201ENST00000430627 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
CDK12-201ENST00000430627 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
CDK12-201ENST00000430627 NOP2P46087 812 aaKnown RBP16.04■□□□□ 0.16
CDK12-201ENST00000430627 ST5P78524 1137 aa16.04■□□□□ 0.16
CDK12-201ENST00000430627 SIL1Q9H173 461 aa16.04■□□□□ 0.16
CDK12-201ENST00000430627 ERC2O15083 957 aa16.04■□□□□ 0.16
CDK12-201ENST00000430627 RAPGEF3O95398 923 aa16.04■□□□□ 0.16
CDK12-201ENST00000430627 POLR3DP05423 398 aaPredicted RBP16.04■□□□□ 0.16
CDK12-201ENST00000430627 TNNT3P45378 269 aaPredicted RBP16.04■□□□□ 0.16
CDK12-201ENST00000430627 GJA3Q9Y6H8 435 aa16.04■□□□□ 0.16
CDK12-201ENST00000430627 NUP133Q8WUM0 1156 aa16.04■□□□□ 0.16
CDK12-201ENST00000430627 TNIP1Q15025 636 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 DNAI2Q9GZS0 605 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 DESP17661 470 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 TRMT1LQ7Z2T5 733 aaKnown RBP16.03■□□□□ 0.16
CDK12-201ENST00000430627 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 ACSBG1Q96GR2 724 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDK12-201ENST00000430627 KCNA4P22459 653 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.03■□□□□ 0.168e-8■■■■□ 25
CDK12-201ENST00000430627 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
CDK12-201ENST00000430627 LRP2BPQ9P2M1 347 aa16.02■□□□□ 0.16
CDK12-201ENST00000430627 ABCF2Q9UG63 623 aa16.01■□□□□ 0.15
CDK12-201ENST00000430627 EAPPQ56P03 285 aaPredicted RBP16.01■□□□□ 0.15
CDK12-201ENST00000430627 BICD2Q8TD16 824 aa16■□□□□ 0.15
CDK12-201ENST00000430627 GAS2L2Q8NHY3 880 aa16■□□□□ 0.15
CDK12-201ENST00000430627 PRAM1Q96QH2 718 aa16■□□□□ 0.15
CDK12-201ENST00000430627 NACAP1Q9BZK3 213 aa16■□□□□ 0.15
CDK12-201ENST00000430627 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
CDK12-201ENST00000430627 LMTK3Q96Q04 1460 aa16■□□□□ 0.15
CDK12-201ENST00000430627 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
CDK12-201ENST00000430627 CCDC96Q2M329 555 aa15.99■□□□□ 0.15
CDK12-201ENST00000430627 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
CDK12-201ENST00000430627 STK32BQ9NY57 414 aa15.99■□□□□ 0.15
CDK12-201ENST00000430627 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
CDK12-201ENST00000430627 SKIDA1Q1XH10 827 aa15.98■□□□□ 0.15
CDK12-201ENST00000430627 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
CDK12-201ENST00000430627 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK12-201ENST00000430627 CIZ1Q9ULV3 898 aaPredicted RBP15.98■□□□□ 0.15
CDK12-201ENST00000430627 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
CDK12-201ENST00000430627 DZIP1Q86YF9 867 aaKnown RBP15.98■□□□□ 0.15
CDK12-201ENST00000430627 ANKRD62A6NC57 917 aa15.98■□□□□ 0.15
CDK12-201ENST00000430627 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
CDK12-201ENST00000430627 MPHOSPH6Q99547 160 aaKnown RBP15.97■□□□□ 0.15
CDK12-201ENST00000430627 VPS37CA5D8V6 355 aaPredicted RBP15.97■□□□□ 0.15
CDK12-201ENST00000430627 TDO2P48775 406 aa15.97■□□□□ 0.15
CDK12-201ENST00000430627 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
CDK12-201ENST00000430627 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
CDK12-201ENST00000430627 CAVIN4Q5BKX8 364 aa15.96■□□□□ 0.15
CDK12-201ENST00000430627 CCDC69A6NI79 296 aa15.96■□□□□ 0.15
CDK12-201ENST00000430627 PLS1Q14651 629 aa15.96■□□□□ 0.15
CDK12-201ENST00000430627 AIDAQ96BJ3 306 aa15.96■□□□□ 0.15
CDK12-201ENST00000430627 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
CDK12-201ENST00000430627 TXLNAP40222 546 aa15.96■□□□□ 0.15
CDK12-201ENST00000430627 PTMSP20962 102 aa15.95■□□□□ 0.14
CDK12-201ENST00000430627 ZKSCAN2Q63HK3 967 aa15.95■□□□□ 0.14
CDK12-201ENST00000430627 SSR1P43307 286 aaKnown RBP15.95■□□□□ 0.14
CDK12-201ENST00000430627 LRSAM1Q6UWE0 723 aa15.95■□□□□ 0.14
CDK12-201ENST00000430627 HDAC9Q9UKV0 1011 aa15.95■□□□□ 0.14
CDK12-201ENST00000430627 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
CDK12-201ENST00000430627 UQCRHP07919 91 aa15.94■□□□□ 0.14
CDK12-201ENST00000430627 TANGO6Q9C0B7 1094 aa15.94■□□□□ 0.14
CDK12-201ENST00000430627 API5Q9BZZ5 524 aaKnown RBP15.94■□□□□ 0.14
CDK12-201ENST00000430627 CDK19Q9BWU1 502 aa15.94■□□□□ 0.14
CDK12-201ENST00000430627 TTLL5Q6EMB2 1281 aa15.94■□□□□ 0.14
CDK12-201ENST00000430627 VEZTQ9HBM0 779 aa15.94■□□□□ 0.14
CDK12-201ENST00000430627 CCDC173Q0VFZ6 552 aa15.93■□□□□ 0.14
CDK12-201ENST00000430627 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
CDK12-201ENST00000430627 TAF12Q16514 161 aa15.93■□□□□ 0.14
CDK12-201ENST00000430627 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
CDK12-201ENST00000430627 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
CDK12-201ENST00000430627 HSPA2P54652 639 aa15.92■□□□□ 0.14
CDK12-201ENST00000430627 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
CDK12-201ENST00000430627 NEFHP12036 1026 aa15.92■□□□□ 0.14
CDK12-201ENST00000430627 GNAI1P63096 354 aa15.92■□□□□ 0.14
CDK12-201ENST00000430627 F8W031 263 aaPredicted RBP15.92■□□□□ 0.14
CDK12-201ENST00000430627 CUL5Q93034 780 aa15.92■□□□□ 0.14
CDK12-201ENST00000430627 COMMD10Q9Y6G5 202 aa15.92■□□□□ 0.14
CDK12-201ENST00000430627 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
CDK12-201ENST00000430627 HOMER2Q9NSB8 354 aa15.91■□□□□ 0.14
CDK12-201ENST00000430627 CBX1P83916 185 aa15.91■□□□□ 0.14
CDK12-201ENST00000430627 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
CDK12-201ENST00000430627 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
CDK12-201ENST00000430627 ZNF354CQ86Y25 554 aa15.91■□□□□ 0.14
CDK12-201ENST00000430627 MKNK2Q9HBH9 465 aa15.91■□□□□ 0.14
CDK12-201ENST00000430627 ATP6V1DQ9Y5K8 247 aa15.91■□□□□ 0.14
CDK12-201ENST00000430627 LPXNO60711 386 aa15.9■□□□□ 0.14
CDK12-201ENST00000430627 FOXO3O43524 673 aa15.9■□□□□ 0.14
CDK12-201ENST00000430627 NOD1Q9Y239 953 aa15.9■□□□□ 0.14
CDK12-201ENST00000430627 SURF6O75683 361 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms