RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 NBPF1Q3BBV0 1214 aa25.35■■□□□ 1.65
RCC1-209ENST00000430407 PLCH1Q4KWH8 1693 aa25.34■■□□□ 1.65
RCC1-209ENST00000430407 FAM98CQ17RN3 349 aaKnown RBP25.32■■□□□ 1.64
RCC1-209ENST00000430407 DEFB132Q7Z7B7 95 aa25.32■■□□□ 1.64
RCC1-209ENST00000430407 NUDT16Q96DE0 195 aaKnown RBP25.31■■□□□ 1.64
RCC1-209ENST00000430407 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
RCC1-209ENST00000430407 ABCA3Q99758 1704 aa25.31■■□□□ 1.64
RCC1-209ENST00000430407 ARHGEF28Q8N1W1 1705 aaKnown RBP25.29■■□□□ 1.64
RCC1-209ENST00000430407 TRPM3Q9HCF6 1732 aaPredicted RBP25.28■■□□□ 1.64
RCC1-209ENST00000430407 BAG6P46379 1132 aa25.27■■□□□ 1.64
RCC1-209ENST00000430407 CDK19Q9BWU1 502 aa25.27■■□□□ 1.64
RCC1-209ENST00000430407 COL14A1Q05707 1796 aaKnown RBP25.26■■□□□ 1.63
RCC1-209ENST00000430407 BRWD3Q6RI45 1802 aa25.26■■□□□ 1.63
RCC1-209ENST00000430407 ALS2Q96Q42 1657 aa25.25■■□□□ 1.63
RCC1-209ENST00000430407 SPATA31A5Q5VU36 1347 aa25.24■■□□□ 1.63
RCC1-209ENST00000430407 SPATA31A7Q8IWB4 1347 aa25.24■■□□□ 1.63
RCC1-209ENST00000430407 TONSLQ96HA7 1378 aa25.23■■□□□ 1.63
RCC1-209ENST00000430407 CCDC61Q9Y6R9 512 aa25.23■■□□□ 1.63
RCC1-209ENST00000430407 ATP7BP35670 1465 aa25.22■■□□□ 1.63
RCC1-209ENST00000430407 CENPJQ9HC77 1338 aaPredicted RBP25.21■■□□□ 1.63
RCC1-209ENST00000430407 ROCK2O75116 1388 aaKnown RBP25.2■■□□□ 1.63
RCC1-209ENST00000430407 NUTM2GQ5VZR2 741 aa25.2■■□□□ 1.62
RCC1-209ENST00000430407 STRN4Q9NRL3 753 aa25.2■■□□□ 1.62
RCC1-209ENST00000430407 KIAA0232Q92628 1395 aa25.19■■□□□ 1.62
RCC1-209ENST00000430407 ACEP12821 1306 aa25.19■■□□□ 1.62
RCC1-209ENST00000430407 ZC3H6P61129 1189 aaKnown RBP25.19■■□□□ 1.62
RCC1-209ENST00000430407 NBPF8Q3BBV2 869 aa25.19■■□□□ 1.62
RCC1-209ENST00000430407 ITSN1Q15811 1721 aa25.19■■□□□ 1.62
RCC1-209ENST00000430407 NRAPQ86VF7 1730 aa25.19■■□□□ 1.62
RCC1-209ENST00000430407 TRPM1Q7Z4N2 1603 aa25.19■■□□□ 1.62
RCC1-209ENST00000430407 CHRNA2Q15822 529 aa25.18■■□□□ 1.62
RCC1-209ENST00000430407 EP400Q96L91 3159 aa25.17■■□□□ 1.62
RCC1-209ENST00000430407 EVA1CP58658 441 aa25.17■■□□□ 1.62
RCC1-209ENST00000430407 SRPK2P78362 688 aaKnown RBP25.17■■□□□ 1.62
RCC1-209ENST00000430407 POLR3AO14802 1390 aaPredicted RBP25.17■■□□□ 1.62
RCC1-209ENST00000430407 PLEKHG3A1L390 1219 aa25.16■■□□□ 1.62
RCC1-209ENST00000430407 FAM182BQ5T319 152 aa25.16■■□□□ 1.62
RCC1-209ENST00000430407 ABTB2Q8N961 1025 aa25.16■■□□□ 1.62
RCC1-209ENST00000430407 SPATA31A1Q5TZJ5 1347 aa25.14■■□□□ 1.62
RCC1-209ENST00000430407 USP35Q9P2H5 1018 aa25.13■■□□□ 1.61
RCC1-209ENST00000430407 EN1Q05925 392 aaPredicted RBP25.12■■□□□ 1.61
RCC1-209ENST00000430407 NLRP13Q86W25 1043 aa25.11■■□□□ 1.61
RCC1-209ENST00000430407 PCGF6Q9BYE7 350 aa25.11■■□□□ 1.61
RCC1-209ENST00000430407 CRYBG1Q9Y4K1 1723 aa25.1■■□□□ 1.61
RCC1-209ENST00000430407 PSDA5PKW4 1024 aaPredicted RBP25.1■■□□□ 1.61
RCC1-209ENST00000430407 FAM196AQ6ZSG2 479 aa25.1■■□□□ 1.61
RCC1-209ENST00000430407 CARD11Q9BXL7 1154 aa25.08■■□□□ 1.61
RCC1-209ENST00000430407 CABP2Q9NPB3 220 aa25.08■■□□□ 1.61
RCC1-209ENST00000430407 PPIP5K1Q6PFW1 1433 aa25.07■■□□□ 1.6
RCC1-209ENST00000430407 PDE3BQ13370 1112 aa25.07■■□□□ 1.6
RCC1-209ENST00000430407 PHRF1Q9P1Y6 1649 aaKnown RBP25.06■■□□□ 1.6
RCC1-209ENST00000430407 QRICH2Q9H0J4 1663 aa25.06■■□□□ 1.6
RCC1-209ENST00000430407 EVC2Q86UK5 1308 aa25.06■■□□□ 1.6
RCC1-209ENST00000430407 SSH2Q76I76 1423 aa25.05■■□□□ 1.6
RCC1-209ENST00000430407 THSD7AQ9UPZ6 1657 aa25.05■■□□□ 1.6
RCC1-209ENST00000430407 BARGINQ6ZT62 677 aa25.05■■□□□ 1.6
RCC1-209ENST00000430407 CLSPNQ9HAW4 1339 aa25.05■■□□□ 1.6
RCC1-209ENST00000430407 TOPAZ1Q8N9V7 1692 aa25.04■■□□□ 1.6
RCC1-209ENST00000430407 TRIM37O94972 964 aa25.04■■□□□ 1.6
RCC1-209ENST00000430407 GCP02774 474 aa25.04■■□□□ 1.6
RCC1-209ENST00000430407 BRD4O60885 1362 aaPredicted RBP25.04■■□□□ 1.6
RCC1-209ENST00000430407 CPDO75976 1380 aa25.04■■□□□ 1.6
RCC1-209ENST00000430407 RGPD1P0DJD0 1748 aa25.03■■□□□ 1.6
RCC1-209ENST00000430407 LARP1Q6PKG0 1096 aaKnown RBP25.03■■□□□ 1.6
RCC1-209ENST00000430407 TCP11L2Q8N4U5 519 aa25.03■■□□□ 1.6
RCC1-209ENST00000430407 USP19O94966 1318 aa25.03■■□□□ 1.6
RCC1-209ENST00000430407 DISP2A7MBM2 1401 aa25.02■■□□□ 1.6
RCC1-209ENST00000430407 ZBTB7CA1YPR0 619 aa25.01■■□□□ 1.59
RCC1-209ENST00000430407 APBA3O96018 575 aa25.01■■□□□ 1.59
RCC1-209ENST00000430407 R3HDM1Q15032 1099 aaKnown RBP25.01■■□□□ 1.59
RCC1-209ENST00000430407 EZH2Q15910 746 aaKnown RBP25.01■■□□□ 1.59
RCC1-209ENST00000430407 CABP1Q9NZU7 370 aa25.01■■□□□ 1.59
RCC1-209ENST00000430407 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
RCC1-209ENST00000430407 NLRP6P59044 892 aa25■■□□□ 1.59
RCC1-209ENST00000430407 NRKQ7Z2Y5 1582 aa24.99■■□□□ 1.59
RCC1-209ENST00000430407 SBNO2Q9Y2G9 1366 aa24.98■■□□□ 1.59
RCC1-209ENST00000430407 TIMELESSQ9UNS1 1208 aa24.98■■□□□ 1.59
RCC1-209ENST00000430407 CAMTA1Q9Y6Y1 1673 aa24.97■■□□□ 1.59
RCC1-209ENST00000430407 CAMKK2Q96RR4 588 aa24.97■■□□□ 1.59
RCC1-209ENST00000430407 LRP5O75197 1615 aa24.97■■□□□ 1.59
RCC1-209ENST00000430407 SRCAPQ6ZRS2 3230 aa24.96■■□□□ 1.59
RCC1-209ENST00000430407 PARD3Q8TEW0 1356 aa24.95■■□□□ 1.59
RCC1-209ENST00000430407 USP6P35125 1406 aa24.95■■□□□ 1.58
RCC1-209ENST00000430407 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
RCC1-209ENST00000430407 NBPF14Q5TI25 921 aa24.91■■□□□ 1.58
RCC1-209ENST00000430407 ZNF692Q9BU19 519 aaPredicted RBP24.91■■□□□ 1.58
RCC1-209ENST00000430407 CRB1P82279 1406 aa24.91■■□□□ 1.58
RCC1-209ENST00000430407 COL5A2P05997 1499 aaPredicted RBP24.9■■□□□ 1.58
RCC1-209ENST00000430407 TNS1Q9HBL0 1735 aaKnown RBP24.9■■□□□ 1.58
RCC1-209ENST00000430407 TOM1L2Q6ZVM7 507 aa24.9■■□□□ 1.58
RCC1-209ENST00000430407 LMO7Q8WWI1 1683 aa24.9■■□□□ 1.58
RCC1-209ENST00000430407 AATKQ6ZMQ8 1374 aa24.9■■□□□ 1.58
RCC1-209ENST00000430407 SLC24A1O60721 1099 aa24.88■■□□□ 1.57
RCC1-209ENST00000430407 KCNH5Q8NCM2 988 aa24.87■■□□□ 1.57
RCC1-209ENST00000430407 CCER1Q8TC90 406 aaPredicted RBP24.87■■□□□ 1.57
RCC1-209ENST00000430407 DDB1Q16531 1140 aa24.85■■□□□ 1.57
RCC1-209ENST00000430407 ST20-MTHFSA0A0A6YYL1 179 aa24.84■■□□□ 1.57
RCC1-209ENST00000430407 PUS7Q96PZ0 661 aaKnown RBP24.84■■□□□ 1.57
RCC1-209ENST00000430407 TTC21BQ7Z4L5 1316 aa24.84■■□□□ 1.57
RCC1-209ENST00000430407 SLIT3O75094 1523 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms