RNA–Protein interactions for RNA: ENST00000430077.6

SLC6A8-204, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2 BASIC

Gene SLC6A8, Length 1,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-204ENST00000430077 TTC21BQ7Z4L5 1316 aa22.15■■□□□ 1.14
SLC6A8-204ENST00000430077 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
SLC6A8-204ENST00000430077 MRS2Q9HD23 443 aa22.14■■□□□ 1.13
SLC6A8-204ENST00000430077 SSH2Q76I76 1423 aa22.13■■□□□ 1.13
SLC6A8-204ENST00000430077 KIF20BQ96Q89 1820 aa22.13■■□□□ 1.13
SLC6A8-204ENST00000430077 PPP2R1AP30153 589 aa22.13■■□□□ 1.13
SLC6A8-204ENST00000430077 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
SLC6A8-204ENST00000430077 FOXO3O43524 673 aa22.12■■□□□ 1.13
SLC6A8-204ENST00000430077 PSME1Q06323 249 aa22.11■■□□□ 1.13
SLC6A8-204ENST00000430077 KIF1AQ12756 1690 aa22.11■■□□□ 1.13
SLC6A8-204ENST00000430077 ZRANB1Q9UGI0 708 aa22.11■■□□□ 1.13
SLC6A8-204ENST00000430077 TTC21AQ8NDW8 1320 aa22.1■■□□□ 1.13
SLC6A8-204ENST00000430077 BRD4O60885 1362 aaPredicted RBP22.09■■□□□ 1.13
SLC6A8-204ENST00000430077 SLAIN2Q9P270 581 aa22.09■■□□□ 1.13
SLC6A8-204ENST00000430077 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
SLC6A8-204ENST00000430077 PAK3O75914 559 aaPredicted RBP22.09■■□□□ 1.13
SLC6A8-204ENST00000430077 XPCQ01831 940 aaPredicted RBP22.09■■□□□ 1.13
SLC6A8-204ENST00000430077 COG3Q96JB2 828 aa22.07■■□□□ 1.12
SLC6A8-204ENST00000430077 BRINP3Q76B58 766 aa22.06■■□□□ 1.12
SLC6A8-204ENST00000430077 DDX17Q92841 729 aaKnown RBP22.05■■□□□ 1.12
SLC6A8-204ENST00000430077 OVOS2A0A0J9YW53 1432 aa22.04■■□□□ 1.12
SLC6A8-204ENST00000430077 OVOS2Q6IE36 1432 aa22.04■■□□□ 1.12
SLC6A8-204ENST00000430077 KRT28Q7Z3Y7 464 aa22.03■■□□□ 1.12
SLC6A8-204ENST00000430077 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
SLC6A8-204ENST00000430077 PIK3C2AO00443 1686 aa22.03■■□□□ 1.12
SLC6A8-204ENST00000430077 ABTB2Q8N961 1025 aa22.03■■□□□ 1.12
SLC6A8-204ENST00000430077 NPHP3Q7Z494 1330 aa22.02■■□□□ 1.12
SLC6A8-204ENST00000430077 NUTM2GQ5VZR2 741 aa22.02■■□□□ 1.12
SLC6A8-204ENST00000430077 NLRP6P59044 892 aa22■■□□□ 1.11
SLC6A8-204ENST00000430077 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
SLC6A8-204ENST00000430077 FBLN1P23142 703 aa22■■□□□ 1.11
SLC6A8-204ENST00000430077 MTHFSP49914 203 aa22■■□□□ 1.11
SLC6A8-204ENST00000430077 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
SLC6A8-204ENST00000430077 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
SLC6A8-204ENST00000430077 TRPM3Q9HCF6 1732 aaPredicted RBP21.98■■□□□ 1.11
SLC6A8-204ENST00000430077 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
SLC6A8-204ENST00000430077 SOX12O15370 315 aa21.97■■□□□ 1.11
SLC6A8-204ENST00000430077 LMOD2Q6P5Q4 547 aa21.97■■□□□ 1.11
SLC6A8-204ENST00000430077 PXDNQ92626 1479 aa21.96■■□□□ 1.11
SLC6A8-204ENST00000430077 AATKQ6ZMQ8 1374 aa21.95■■□□□ 1.1
SLC6A8-204ENST00000430077 POLKQ9UBT6 870 aa21.94■■□□□ 1.1
SLC6A8-204ENST00000430077 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
SLC6A8-204ENST00000430077 SBNO1A3KN83 1393 aa21.94■■□□□ 1.1
SLC6A8-204ENST00000430077 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
SLC6A8-204ENST00000430077 CFAP53Q96M91 514 aa21.93■■□□□ 1.1
SLC6A8-204ENST00000430077 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
SLC6A8-204ENST00000430077 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
SLC6A8-204ENST00000430077 USP54Q70EL1 1684 aa21.92■■□□□ 1.1
SLC6A8-204ENST00000430077 PLEKHG5O94827 1062 aa21.92■■□□□ 1.1
SLC6A8-204ENST00000430077 TNS3Q68CZ2 1445 aa21.91■■□□□ 1.1
SLC6A8-204ENST00000430077 ROBO1Q9Y6N7 1651 aa21.91■■□□□ 1.1
SLC6A8-204ENST00000430077 SOS2Q07890 1332 aaPredicted RBP21.9■■□□□ 1.1
SLC6A8-204ENST00000430077 ALS2Q96Q42 1657 aa21.9■■□□□ 1.1
SLC6A8-204ENST00000430077 SMG6Q86US8 1419 aaKnown RBP21.9■■□□□ 1.1
SLC6A8-204ENST00000430077 TOM1O60784 492 aa21.9■■□□□ 1.1
SLC6A8-204ENST00000430077 WDR43Q15061 677 aaKnown RBP eCLIP21.89■■□□□ 1.094e-9■■■□□ 15.5
SLC6A8-204ENST00000430077 SPATA31A3Q5VYP0 1347 aa21.89■■□□□ 1.09
SLC6A8-204ENST00000430077 NHSL1Q5SYE7 1610 aa21.89■■□□□ 1.09
SLC6A8-204ENST00000430077 MAP2P11137 1827 aaKnown RBP21.88■■□□□ 1.09
SLC6A8-204ENST00000430077 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
SLC6A8-204ENST00000430077 PIP4K2BP78356 416 aa21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 CERKQ8TCT0 537 aa21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 USP19O94966 1318 aa21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 MAP3K19Q56UN5 1328 aa21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 PNPLA6Q8IY17 1366 aa21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 COL3A1P02461 1466 aaPredicted RBP21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 IQSEC2Q5JU85 1478 aa21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 CDK12Q9NYV4 1490 aaPredicted RBP21.86■■□□□ 1.09
SLC6A8-204ENST00000430077 ARHGEF10O15013 1369 aa21.85■■□□□ 1.09
SLC6A8-204ENST00000430077 KCNH5Q8NCM2 988 aa21.85■■□□□ 1.09
SLC6A8-204ENST00000430077 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
SLC6A8-204ENST00000430077 SLIT3O75094 1523 aa21.84■■□□□ 1.09
SLC6A8-204ENST00000430077 NFAT5O94916 1531 aa21.84■■□□□ 1.09
SLC6A8-204ENST00000430077 GCP02774 474 aa21.83■■□□□ 1.09
SLC6A8-204ENST00000430077 SHPRHQ149N8 1683 aa21.83■■□□□ 1.09
SLC6A8-204ENST00000430077 MED1Q15648 1581 aaPredicted RBP21.83■■□□□ 1.08
SLC6A8-204ENST00000430077 INSRP06213 1382 aa21.82■■□□□ 1.08
SLC6A8-204ENST00000430077 DIAPH1O60610 1272 aaKnown RBP21.82■■□□□ 1.08
SLC6A8-204ENST00000430077 HNRNPUQ00839 825 aaKnown RBP eCLIP21.82■■□□□ 1.08
SLC6A8-204ENST00000430077 PEAK1Q9H792 1746 aa21.82■■□□□ 1.08
SLC6A8-204ENST00000430077 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
SLC6A8-204ENST00000430077 AMPHP49418 695 aa21.81■■□□□ 1.08
SLC6A8-204ENST00000430077 CABLES1Q8TDN4 633 aa21.81■■□□□ 1.08
SLC6A8-204ENST00000430077 FLT4P35916 1363 aa21.8■■□□□ 1.08
SLC6A8-204ENST00000430077 ZBTB7CA1YPR0 619 aa21.79■■□□□ 1.08
SLC6A8-204ENST00000430077 U2SURPO15042 1029 aaKnown RBP21.79■■□□□ 1.08
SLC6A8-204ENST00000430077 NUDCQ9Y266 331 aa21.79■■□□□ 1.08
SLC6A8-204ENST00000430077 HSP90AB2PQ58FF8 381 aa21.79■■□□□ 1.08
SLC6A8-204ENST00000430077 U2AF1L5P0DN76 240 aaPredicted RBP21.78■■□□□ 1.08
SLC6A8-204ENST00000430077 U2AF1Q01081 240 aaKnown RBP eCLIP21.78■■□□□ 1.08
SLC6A8-204ENST00000430077 SENP3-EIF4A1A0A087X0R7 540 aa21.77■■□□□ 1.08
SLC6A8-204ENST00000430077 BLMP54132 1417 aaPredicted RBP21.77■■□□□ 1.08
SLC6A8-204ENST00000430077 PHRF1Q9P1Y6 1649 aaKnown RBP21.77■■□□□ 1.08
SLC6A8-204ENST00000430077 KIF24Q5T7B8 1368 aa21.76■■□□□ 1.07
SLC6A8-204ENST00000430077 HOXC9P31274 260 aa21.76■■□□□ 1.07
SLC6A8-204ENST00000430077 IL13P35225 146 aa21.76■■□□□ 1.07
SLC6A8-204ENST00000430077 LRRC59Q96AG4 307 aaKnown RBP21.76■■□□□ 1.07
SLC6A8-204ENST00000430077 ZC3H6P61129 1189 aaKnown RBP21.75■■□□□ 1.07
SLC6A8-204ENST00000430077 ARHGEF25Q86VW2 580 aa21.75■■□□□ 1.07
SLC6A8-204ENST00000430077 LTN1O94822 1766 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms