RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 DYNC1I1O14576 645 aa13.74□□□□□ -0.21
SEMA4D-209ENST00000429836 HS1BP3Q53T59 392 aa13.74□□□□□ -0.21
SEMA4D-209ENST00000429836 CHAMP1Q96JM3 812 aa13.74□□□□□ -0.21
SEMA4D-209ENST00000429836 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
SEMA4D-209ENST00000429836 TSC1Q92574 1164 aa13.74□□□□□ -0.21
SEMA4D-209ENST00000429836 TBC1D9Q6ZT07 1266 aa13.73□□□□□ -0.21
SEMA4D-209ENST00000429836 LMBRD1Q9NUN5 540 aa13.73□□□□□ -0.21
SEMA4D-209ENST00000429836 IQGAP3Q86VI3 1631 aa13.73□□□□□ -0.21
SEMA4D-209ENST00000429836 MTHFSP49914 203 aa13.73□□□□□ -0.21
SEMA4D-209ENST00000429836 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
SEMA4D-209ENST00000429836 ERVK-7P63135 1459 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 ABCA8O94911 1581 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 ANKRD45Q5TZF3 282 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 SASS6Q6UVJ0 657 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 ZBTB40Q9NUA8 1239 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 PRPF40AO75400 957 aaKnown RBP13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
SEMA4D-209ENST00000429836 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
SEMA4D-209ENST00000429836 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.21
SEMA4D-209ENST00000429836 BMP2KLQ5H9B9 411 aa13.71□□□□□ -0.21
SEMA4D-209ENST00000429836 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.22
SEMA4D-209ENST00000429836 RNF214Q8ND24 703 aa13.71□□□□□ -0.22
SEMA4D-209ENST00000429836 GPT2Q8TD30 523 aa13.71□□□□□ -0.22
SEMA4D-209ENST00000429836 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
SEMA4D-209ENST00000429836 ATP10AO60312 1499 aa13.7□□□□□ -0.22
SEMA4D-209ENST00000429836 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
SEMA4D-209ENST00000429836 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
SEMA4D-209ENST00000429836 MPNDQ8N594 471 aa13.7□□□□□ -0.22
SEMA4D-209ENST00000429836 C1orf115Q9H7X2 142 aa13.7□□□□□ -0.22
SEMA4D-209ENST00000429836 CDC42BPBQ9Y5S2 1711 aa13.7□□□□□ -0.22
SEMA4D-209ENST00000429836 SYCE3A1L190 88 aa13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 KANK1Q14678 1352 aa13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 DMTNQ08495 405 aa13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 KIF16BQ96L93 1317 aa13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 ZSCAN20P17040 1043 aaPredicted RBP13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
SEMA4D-209ENST00000429836 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
SEMA4D-209ENST00000429836 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-209ENST00000429836 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-209ENST00000429836 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
SEMA4D-209ENST00000429836 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
SEMA4D-209ENST00000429836 TTC37Q6PGP7 1564 aa13.67□□□□□ -0.22
SEMA4D-209ENST00000429836 CBX1P83916 185 aa13.67□□□□□ -0.22
SEMA4D-209ENST00000429836 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
SEMA4D-209ENST00000429836 FGD1P98174 961 aa13.67□□□□□ -0.22
SEMA4D-209ENST00000429836 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-209ENST00000429836 ZGPATQ8N5A5 531 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-209ENST00000429836 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
SEMA4D-209ENST00000429836 PTMAP06454 111 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-209ENST00000429836 CYP2E1P05181 493 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-209ENST00000429836 NUCB2P80303 420 aa13.66□□□□□ -0.22
SEMA4D-209ENST00000429836 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
SEMA4D-209ENST00000429836 SPHKAPQ2M3C7 1700 aa13.66□□□□□ -0.22
SEMA4D-209ENST00000429836 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
SEMA4D-209ENST00000429836 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
SEMA4D-209ENST00000429836 MCM5P33992 734 aa13.65□□□□□ -0.22
SEMA4D-209ENST00000429836 LRSAM1Q6UWE0 723 aa13.65□□□□□ -0.22
SEMA4D-209ENST00000429836 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
SEMA4D-209ENST00000429836 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
SEMA4D-209ENST00000429836 DUOX2Q9NRD8 1548 aa13.64□□□□□ -0.23
SEMA4D-209ENST00000429836 ZNF518AQ6AHZ1 1483 aa13.64□□□□□ -0.23
SEMA4D-209ENST00000429836 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
SEMA4D-209ENST00000429836 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-209ENST00000429836 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
SEMA4D-209ENST00000429836 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
SEMA4D-209ENST00000429836 PREX2Q70Z35 1606 aa13.64□□□□□ -0.23
SEMA4D-209ENST00000429836 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 PPIP5K1Q6PFW1 1433 aa13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 ARHGAP5Q13017 1502 aa13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 CDC45O75419 566 aa13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 CT47B1P0C2W7 299 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
SEMA4D-209ENST00000429836 KIAA2012Q0VF49 1180 aa13.62□□□□□ -0.23
SEMA4D-209ENST00000429836 RABEP1Q15276 862 aa13.62□□□□□ -0.23
SEMA4D-209ENST00000429836 NOS1P29475 1434 aa13.62□□□□□ -0.23
SEMA4D-209ENST00000429836 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
SEMA4D-209ENST00000429836 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
SEMA4D-209ENST00000429836 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
SEMA4D-209ENST00000429836 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
SEMA4D-209ENST00000429836 GSPT1P15170 499 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 PTPRTO14522 1441 aa13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 CD109Q6YHK3 1445 aa13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 PPP4R3BQ5MIZ7 849 aa13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-209ENST00000429836 SIRT2Q8IXJ6 389 aa13.6□□□□□ -0.23
SEMA4D-209ENST00000429836 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
SEMA4D-209ENST00000429836 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
SEMA4D-209ENST00000429836 IGSF3O75054 1194 aa13.59□□□□□ -0.23
SEMA4D-209ENST00000429836 GCC1Q96CN9 775 aa13.59□□□□□ -0.23
SEMA4D-209ENST00000429836 ZBTB7BO15156 539 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms