RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
SENP3-202ENST00000429205 WDR43Q15061 677 aaKnown RBP eCLIP17.56■□□□□ 0.4
SENP3-202ENST00000429205 HSP90AA2PQ14568 343 aaPredicted RBP17.55■□□□□ 0.4
SENP3-202ENST00000429205 HDGFL2Q7Z4V5 671 aaPredicted RBP17.55■□□□□ 0.4
SENP3-202ENST00000429205 NAP1L2Q9ULW6 460 aaPredicted RBP17.55■□□□□ 0.4
SENP3-202ENST00000429205 ZNF142P52746 1687 aaPredicted RBP17.55■□□□□ 0.4
SENP3-202ENST00000429205 NSD2O96028 1365 aa17.55■□□□□ 0.4
SENP3-202ENST00000429205 IRX6P78412 446 aaPredicted RBP17.54■□□□□ 0.4
SENP3-202ENST00000429205 AMOTL2Q9Y2J4 779 aa17.54■□□□□ 0.4
SENP3-202ENST00000429205 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.4
SENP3-202ENST00000429205 GGNBP2Q9H3C7 697 aa17.52■□□□□ 0.4
SENP3-202ENST00000429205 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.4
SENP3-202ENST00000429205 NCKAP5LQ9HCH0 1330 aa17.52■□□□□ 0.39
SENP3-202ENST00000429205 FYB1O15117 783 aa17.52■□□□□ 0.39
SENP3-202ENST00000429205 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
SENP3-202ENST00000429205 POLR3AO14802 1390 aaPredicted RBP17.51■□□□□ 0.39
SENP3-202ENST00000429205 DIP2AQ14689 1571 aa17.51■□□□□ 0.39
SENP3-202ENST00000429205 NUDCQ9Y266 331 aa17.51■□□□□ 0.39
SENP3-202ENST00000429205 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
SENP3-202ENST00000429205 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.5■□□□□ 0.39
SENP3-202ENST00000429205 ATP7BP35670 1465 aa17.5■□□□□ 0.39
SENP3-202ENST00000429205 MTHFSP49914 203 aa17.49■□□□□ 0.39
SENP3-202ENST00000429205 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
SENP3-202ENST00000429205 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
SENP3-202ENST00000429205 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
SENP3-202ENST00000429205 SAMD1Q6SPF0 538 aaPredicted RBP17.48■□□□□ 0.39
SENP3-202ENST00000429205 SETD1BQ9UPS6 1966 aaKnown RBP17.48■□□□□ 0.39
SENP3-202ENST00000429205 PTCH1Q13635 1447 aa17.47■□□□□ 0.39
SENP3-202ENST00000429205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
SENP3-202ENST00000429205 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
SENP3-202ENST00000429205 NUTM2FA1L443 756 aa17.47■□□□□ 0.39
SENP3-202ENST00000429205 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
SENP3-202ENST00000429205 NBR1Q14596 966 aa17.46■□□□□ 0.39
SENP3-202ENST00000429205 ADGRB2O60241 1585 aa17.46■□□□□ 0.38
SENP3-202ENST00000429205 HSP90B1P14625 803 aaKnown RBP17.45■□□□□ 0.38
SENP3-202ENST00000429205 CCDC146Q8IYE0 955 aa17.45■□□□□ 0.38
SENP3-202ENST00000429205 PRDM4Q9UKN5 801 aa17.45■□□□□ 0.38
SENP3-202ENST00000429205 KCNA6P17658 529 aa17.45■□□□□ 0.38
SENP3-202ENST00000429205 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
SENP3-202ENST00000429205 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
SENP3-202ENST00000429205 XRN1Q8IZH2 1706 aaKnown RBP17.45■□□□□ 0.38
SENP3-202ENST00000429205 CHRM1P11229 460 aaPredicted RBP17.43■□□□□ 0.38
SENP3-202ENST00000429205 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
SENP3-202ENST00000429205 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
SENP3-202ENST00000429205 PIK3R4Q99570 1358 aa17.43■□□□□ 0.38
SENP3-202ENST00000429205 KIF20BQ96Q89 1820 aa17.43■□□□□ 0.38
SENP3-202ENST00000429205 CFAP53Q96M91 514 aa17.43■□□□□ 0.38
SENP3-202ENST00000429205 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
SENP3-202ENST00000429205 CDC42BPGQ6DT37 1551 aa17.42■□□□□ 0.38
SENP3-202ENST00000429205 ANKRD26Q9UPS8 1709 aa17.42■□□□□ 0.38
SENP3-202ENST00000429205 APAF1O14727 1248 aa17.4■□□□□ 0.38
SENP3-202ENST00000429205 DHX37Q8IY37 1157 aaKnown RBP17.4■□□□□ 0.38
SENP3-202ENST00000429205 NME9Q86XW9 330 aa17.4■□□□□ 0.38
SENP3-202ENST00000429205 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
SENP3-202ENST00000429205 SHPRHQ149N8 1683 aa17.4■□□□□ 0.38
SENP3-202ENST00000429205 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
SENP3-202ENST00000429205 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
SENP3-202ENST00000429205 ACEP12821 1306 aa17.38■□□□□ 0.37
SENP3-202ENST00000429205 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
SENP3-202ENST00000429205 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
SENP3-202ENST00000429205 TOPAZ1Q8N9V7 1692 aa17.38■□□□□ 0.37
SENP3-202ENST00000429205 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
SENP3-202ENST00000429205 ZNF521Q96K83 1311 aa17.37■□□□□ 0.37
SENP3-202ENST00000429205 FBLN1P23142 703 aa17.37■□□□□ 0.37
SENP3-202ENST00000429205 MON2Q7Z3U7 1717 aa17.37■□□□□ 0.37
SENP3-202ENST00000429205 AKAP12Q02952 1782 aa17.37■□□□□ 0.37
SENP3-202ENST00000429205 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
SENP3-202ENST00000429205 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
SENP3-202ENST00000429205 HSP90AA1P07900 732 aaKnown RBP17.36■□□□□ 0.37
SENP3-202ENST00000429205 BBXQ8WY36 941 aaPredicted RBP17.36■□□□□ 0.37
SENP3-202ENST00000429205 RBM33Q96EV2 1170 aaKnown RBP17.36■□□□□ 0.37
SENP3-202ENST00000429205 CHD2O14647 1828 aaKnown RBP17.36■□□□□ 0.37
SENP3-202ENST00000429205 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
SENP3-202ENST00000429205 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
SENP3-202ENST00000429205 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
SENP3-202ENST00000429205 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
SENP3-202ENST00000429205 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
SENP3-202ENST00000429205 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
SENP3-202ENST00000429205 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
SENP3-202ENST00000429205 RGPD8O14715 1765 aaPredicted RBP17.34■□□□□ 0.37
SENP3-202ENST00000429205 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.37
SENP3-202ENST00000429205 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.37
SENP3-202ENST00000429205 GTF2E1P29083 439 aaPredicted RBP17.33■□□□□ 0.37
SENP3-202ENST00000429205 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.37
SENP3-202ENST00000429205 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
SENP3-202ENST00000429205 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
SENP3-202ENST00000429205 COG3Q96JB2 828 aa17.33■□□□□ 0.36
SENP3-202ENST00000429205 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.36
SENP3-202ENST00000429205 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
SENP3-202ENST00000429205 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
SENP3-202ENST00000429205 USP6P35125 1406 aa17.32■□□□□ 0.36
SENP3-202ENST00000429205 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
SENP3-202ENST00000429205 IPO9Q96P70 1041 aaKnown RBP17.31■□□□□ 0.36
SENP3-202ENST00000429205 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
SENP3-202ENST00000429205 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
SENP3-202ENST00000429205 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
SENP3-202ENST00000429205 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
SENP3-202ENST00000429205 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
SENP3-202ENST00000429205 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
SENP3-202ENST00000429205 NEFMP07197 916 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms