RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
CDH3-202ENST00000429102 IQGAP3Q86VI3 1631 aa15.58■□□□□ 0.08
CDH3-202ENST00000429102 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
CDH3-202ENST00000429102 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
CDH3-202ENST00000429102 CDK19Q9BWU1 502 aa15.57■□□□□ 0.08
CDH3-202ENST00000429102 ADGRL1O94910 1474 aa15.57■□□□□ 0.08
CDH3-202ENST00000429102 UNC13BO14795 1591 aa15.57■□□□□ 0.08
CDH3-202ENST00000429102 MPNDQ8N594 471 aa15.57■□□□□ 0.08
CDH3-202ENST00000429102 MIS18AQ9NYP9 233 aa15.57■□□□□ 0.08
CDH3-202ENST00000429102 SLC4A10Q6U841 1118 aa15.56■□□□□ 0.08
CDH3-202ENST00000429102 DDX49Q9Y6V7 483 aaKnown RBP15.56■□□□□ 0.08
CDH3-202ENST00000429102 SYNMO15061 1565 aa15.56■□□□□ 0.08
CDH3-202ENST00000429102 TBC1D9Q6ZT07 1266 aa15.55■□□□□ 0.08
CDH3-202ENST00000429102 A0A1W2PP64 1363 aa15.55■□□□□ 0.08
CDH3-202ENST00000429102 OTUD7AQ8TE49 926 aaPredicted RBP15.55■□□□□ 0.08
CDH3-202ENST00000429102 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
CDH3-202ENST00000429102 TSHZ3Q63HK5 1081 aa15.55■□□□□ 0.08
CDH3-202ENST00000429102 MCTP1Q6DN14 999 aa15.55■□□□□ 0.08
CDH3-202ENST00000429102 DTNBO60941 627 aa15.54■□□□□ 0.08
CDH3-202ENST00000429102 GAS2L2Q8NHY3 880 aa15.54■□□□□ 0.08
CDH3-202ENST00000429102 PLEKHF1Q96S99 279 aa15.54■□□□□ 0.08
CDH3-202ENST00000429102 SMC5Q8IY18 1101 aa15.53■□□□□ 0.08
CDH3-202ENST00000429102 GBP4Q96PP9 640 aa15.53■□□□□ 0.08
CDH3-202ENST00000429102 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
CDH3-202ENST00000429102 NINLQ9Y2I6 1382 aa15.53■□□□□ 0.08
CDH3-202ENST00000429102 NUCB1Q02818 461 aa15.53■□□□□ 0.08
CDH3-202ENST00000429102 NME9Q86XW9 330 aa15.53■□□□□ 0.08
CDH3-202ENST00000429102 C8orf58Q8NAV2 365 aa15.53■□□□□ 0.08
CDH3-202ENST00000429102 HDAC1Q13547 482 aaPredicted RBP15.53■□□□□ 0.08
CDH3-202ENST00000429102 DDX11L8A8MPP1 907 aa15.52■□□□□ 0.07
CDH3-202ENST00000429102 MRE11P49959 708 aa15.52■□□□□ 0.07
CDH3-202ENST00000429102 TWISTNBQ3B726 338 aaPredicted RBP15.52■□□□□ 0.07
CDH3-202ENST00000429102 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
CDH3-202ENST00000429102 CCDC27Q2M243 656 aa15.51■□□□□ 0.07
CDH3-202ENST00000429102 PKP1Q13835 747 aa15.51■□□□□ 0.07
CDH3-202ENST00000429102 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
CDH3-202ENST00000429102 KDM5AP29375 1690 aaKnown RBP15.51■□□□□ 0.07
CDH3-202ENST00000429102 NLRP1Q9C000 1473 aa15.51■□□□□ 0.07
CDH3-202ENST00000429102 CAVIN1Q6NZI2 390 aaKnown RBP15.5■□□□□ 0.07
CDH3-202ENST00000429102 TRPM2O94759 1503 aa15.5■□□□□ 0.07
CDH3-202ENST00000429102 MBIPQ9NS73 344 aa15.5■□□□□ 0.07
CDH3-202ENST00000429102 CD109Q6YHK3 1445 aa15.5■□□□□ 0.07
CDH3-202ENST00000429102 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
CDH3-202ENST00000429102 ESPNB1AK53 854 aa15.49■□□□□ 0.07
CDH3-202ENST00000429102 MCM10Q7L590 875 aa15.49■□□□□ 0.07
CDH3-202ENST00000429102 SIRT2Q8IXJ6 389 aa15.49■□□□□ 0.07
CDH3-202ENST00000429102 GOLGA6L22H0YM25 854 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 ZBTB7BO15156 539 aaPredicted RBP15.48■□□□□ 0.07
CDH3-202ENST00000429102 TXNDC2Q86VQ3 553 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 ANP32BQ92688 251 aaKnown RBP15.48■□□□□ 0.07
CDH3-202ENST00000429102 POLKQ9UBT6 870 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 ZNF518AQ6AHZ1 1483 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 ABCC1P33527 1531 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 VAMP4O75379 141 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 RNF214Q8ND24 703 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 ANKRD36BQ8N2N9 1353 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
CDH3-202ENST00000429102 GLIPR1L2Q4G1C9 344 aa15.48■□□□□ 0.07
CDH3-202ENST00000429102 RBM27Q9P2N5 1060 aaKnown RBP15.48■□□□□ 0.07
CDH3-202ENST00000429102 K7ELQ4 463 aaPredicted RBP15.47■□□□□ 0.07
CDH3-202ENST00000429102 AEBP1Q8IUX7 1158 aa15.47■□□□□ 0.07
CDH3-202ENST00000429102 F6X3S4 739 aa15.46■□□□□ 0.07
CDH3-202ENST00000429102 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.07
CDH3-202ENST00000429102 AAMPQ13685 434 aa15.46■□□□□ 0.07
CDH3-202ENST00000429102 NPATQ14207 1427 aa15.46■□□□□ 0.07
CDH3-202ENST00000429102 FSD2A1L4K1 749 aa15.46■□□□□ 0.07
CDH3-202ENST00000429102 RBM10P98175 930 aaKnown RBP15.46■□□□□ 0.07
CDH3-202ENST00000429102 ZGPATQ8N5A5 531 aaKnown RBP15.46■□□□□ 0.07
CDH3-202ENST00000429102 IQGAP1P46940 1657 aa15.45■□□□□ 0.06
CDH3-202ENST00000429102 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
CDH3-202ENST00000429102 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
CDH3-202ENST00000429102 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
CDH3-202ENST00000429102 NASPP49321 788 aaPredicted RBP15.44■□□□□ 0.06
CDH3-202ENST00000429102 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
CDH3-202ENST00000429102 ABCA6Q8N139 1617 aa15.44■□□□□ 0.06
CDH3-202ENST00000429102 SULT6B1Q6IMI4 303 aa15.44■□□□□ 0.06
CDH3-202ENST00000429102 GSPT1P15170 499 aaKnown RBP15.44■□□□□ 0.06
CDH3-202ENST00000429102 KIF2CQ99661 725 aa15.44■□□□□ 0.06
CDH3-202ENST00000429102 LARP6Q9BRS8 491 aaKnown RBP15.44■□□□□ 0.06
CDH3-202ENST00000429102 ZFYVE16Q7Z3T8 1539 aa15.44■□□□□ 0.06
CDH3-202ENST00000429102 LAMC1P11047 1609 aa15.43■□□□□ 0.06
CDH3-202ENST00000429102 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
CDH3-202ENST00000429102 MYOM1P52179 1685 aa15.43■□□□□ 0.06
CDH3-202ENST00000429102 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
CDH3-202ENST00000429102 NFE2L2Q16236 605 aa15.43■□□□□ 0.06
CDH3-202ENST00000429102 FCHSD2O94868 740 aa15.43■□□□□ 0.06
CDH3-202ENST00000429102 BMP2KLQ5H9B9 411 aa15.43■□□□□ 0.06
CDH3-202ENST00000429102 CHD1O14646 1710 aa15.43■□□□□ 0.06
CDH3-202ENST00000429102 CDC45O75419 566 aa15.43■□□□□ 0.06
CDH3-202ENST00000429102 RILPL2Q969X0 211 aa15.42■□□□□ 0.06
CDH3-202ENST00000429102 GNAI1P63096 354 aa15.42■□□□□ 0.06
CDH3-202ENST00000429102 PLCB2Q00722 1185 aa15.42■□□□□ 0.06
CDH3-202ENST00000429102 EXOC6BQ9Y2D4 811 aa15.42■□□□□ 0.06
CDH3-202ENST00000429102 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
CDH3-202ENST00000429102 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
CDH3-202ENST00000429102 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
CDH3-202ENST00000429102 BAG4O95429 457 aaKnown RBP15.41■□□□□ 0.06
CDH3-202ENST00000429102 RBM25P49756 843 aaKnown RBP15.41■□□□□ 0.06
CDH3-202ENST00000429102 RAB3GAP1Q15042 981 aa15.41■□□□□ 0.06
CDH3-202ENST00000429102 UBE2Q2Q8WVN8 375 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms