RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 AK9Q5TCS8 1911 aa19.81■□□□□ 0.76
C9orf3-206ENST00000428313 BMP2KLQ5H9B9 411 aa19.81■□□□□ 0.76
C9orf3-206ENST00000428313 DZIP1LQ8IYY4 767 aaKnown RBP19.81■□□□□ 0.76
C9orf3-206ENST00000428313 PIBF1Q8WXW3 757 aa19.81■□□□□ 0.76
C9orf3-206ENST00000428313 ZNF777Q9ULD5 760 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-206ENST00000428313 DNTTIP2Q5QJE6 756 aaKnown RBP19.81■□□□□ 0.76
C9orf3-206ENST00000428313 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
C9orf3-206ENST00000428313 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
C9orf3-206ENST00000428313 FTSJ3Q8IY81 847 aaKnown RBP19.79■□□□□ 0.76
C9orf3-206ENST00000428313 PLA2R1Q13018 1463 aa19.79■□□□□ 0.76
C9orf3-206ENST00000428313 UNC13BO14795 1591 aa19.79■□□□□ 0.76
C9orf3-206ENST00000428313 SHPRHQ149N8 1683 aa19.79■□□□□ 0.76
C9orf3-206ENST00000428313 MAST1Q9Y2H9 1570 aa19.79■□□□□ 0.76
C9orf3-206ENST00000428313 REREQ9P2R6 1566 aa19.79■□□□□ 0.76
C9orf3-206ENST00000428313 NUCB1Q02818 461 aa19.78■□□□□ 0.76
C9orf3-206ENST00000428313 DDX19BQ9UMR2 479 aa19.78■□□□□ 0.76
C9orf3-206ENST00000428313 PTMAP06454 111 aaKnown RBP19.78■□□□□ 0.76
C9orf3-206ENST00000428313 CT47B1P0C2W7 299 aaPredicted RBP19.78■□□□□ 0.76
C9orf3-206ENST00000428313 PDCL2Q8N4E4 241 aa19.78■□□□□ 0.76
C9orf3-206ENST00000428313 RGL3Q3MIN7 710 aa19.77■□□□□ 0.76
C9orf3-206ENST00000428313 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
C9orf3-206ENST00000428313 GPT2Q8TD30 523 aa19.77■□□□□ 0.76
C9orf3-206ENST00000428313 KDM5AP29375 1690 aaKnown RBP19.77■□□□□ 0.76
C9orf3-206ENST00000428313 CCDC27Q2M243 656 aa19.77■□□□□ 0.75
C9orf3-206ENST00000428313 FEZ1Q99689 392 aa19.77■□□□□ 0.75
C9orf3-206ENST00000428313 CWC22Q9HCG8 908 aaKnown RBP19.76■□□□□ 0.75
C9orf3-206ENST00000428313 ATP10BO94823 1461 aa19.76■□□□□ 0.75
C9orf3-206ENST00000428313 NOLC1Q14978 699 aaKnown RBP eCLIP19.76■□□□□ 0.75
C9orf3-206ENST00000428313 BCL2L13Q9BXK5 485 aa19.76■□□□□ 0.75
C9orf3-206ENST00000428313 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
C9orf3-206ENST00000428313 RUNDC1Q96C34 613 aa19.75■□□□□ 0.75
C9orf3-206ENST00000428313 SPTLC3Q9NUV7 552 aa19.75■□□□□ 0.75
C9orf3-206ENST00000428313 YEATS2Q9ULM3 1422 aa19.75■□□□□ 0.75
C9orf3-206ENST00000428313 FKBP5Q13451 457 aaPredicted RBP19.74■□□□□ 0.75
C9orf3-206ENST00000428313 ANKRD7Q92527 254 aa19.74■□□□□ 0.75
C9orf3-206ENST00000428313 ATP10AO60312 1499 aa19.74■□□□□ 0.75
C9orf3-206ENST00000428313 MBD3O95983 291 aa19.74■□□□□ 0.75
C9orf3-206ENST00000428313 TSC1Q92574 1164 aa19.74■□□□□ 0.75
C9orf3-206ENST00000428313 JARID2Q92833 1246 aaPredicted RBP19.74■□□□□ 0.75
C9orf3-206ENST00000428313 RBM27Q9P2N5 1060 aaKnown RBP19.74■□□□□ 0.75
C9orf3-206ENST00000428313 CEP152O94986 1710 aa19.74■□□□□ 0.75
C9orf3-206ENST00000428313 GABPB1Q06547 395 aaPredicted RBP19.73■□□□□ 0.75
C9orf3-206ENST00000428313 RABEP1Q15276 862 aa19.73■□□□□ 0.75
C9orf3-206ENST00000428313 TMEM63CQ9P1W3 806 aa19.73■□□□□ 0.75
C9orf3-206ENST00000428313 PREX2Q70Z35 1606 aa19.73■□□□□ 0.75
C9orf3-206ENST00000428313 SYCE3A1L190 88 aa19.73■□□□□ 0.75
C9orf3-206ENST00000428313 PRPF40AO75400 957 aaKnown RBP19.72■□□□□ 0.75
C9orf3-206ENST00000428313 SLC20A2Q08357 652 aa19.72■□□□□ 0.75
C9orf3-206ENST00000428313 RBM42Q9BTD8 480 aaKnown RBP19.72■□□□□ 0.75
C9orf3-206ENST00000428313 CGNQ9P2M7 1197 aaKnown RBP19.72■□□□□ 0.75
C9orf3-206ENST00000428313 MADDQ8WXG6 1647 aa19.72■□□□□ 0.75
C9orf3-206ENST00000428313 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-206ENST00000428313 CDK11BP21127 795 aaKnown RBP19.72■□□□□ 0.75
C9orf3-206ENST00000428313 ZNF830Q96NB3 372 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-206ENST00000428313 IQGAP3Q86VI3 1631 aa19.71■□□□□ 0.75
C9orf3-206ENST00000428313 CHD1LQ86WJ1 897 aa19.71■□□□□ 0.75
C9orf3-206ENST00000428313 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
C9orf3-206ENST00000428313 OGFRQ9NZT2 677 aa19.71■□□□□ 0.75
C9orf3-206ENST00000428313 ZNF771Q7L3S4 317 aaPredicted RBP19.7■□□□□ 0.74
C9orf3-206ENST00000428313 TSPY26PQ9H489 355 aa19.7■□□□□ 0.74
C9orf3-206ENST00000428313 CLTCL1P53675 1640 aa19.7■□□□□ 0.74
C9orf3-206ENST00000428313 SAMD9LQ8IVG5 1584 aa19.69■□□□□ 0.74
C9orf3-206ENST00000428313 SPDYE4A6NLX3 237 aa19.69■□□□□ 0.74
C9orf3-206ENST00000428313 UVSSAQ2YD98 709 aa19.69■□□□□ 0.74
C9orf3-206ENST00000428313 TBC1D9Q6ZT07 1266 aa19.69■□□□□ 0.74
C9orf3-206ENST00000428313 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
C9orf3-206ENST00000428313 JPH4Q96JJ6 628 aa19.69■□□□□ 0.74
C9orf3-206ENST00000428313 TCP11L2Q8N4U5 519 aa19.68■□□□□ 0.74
C9orf3-206ENST00000428313 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
C9orf3-206ENST00000428313 CTIFO43310 598 aaKnown RBP19.67■□□□□ 0.74
C9orf3-206ENST00000428313 TRIM27P14373 513 aa19.67■□□□□ 0.74
C9orf3-206ENST00000428313 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
C9orf3-206ENST00000428313 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
C9orf3-206ENST00000428313 CFAP44Q96MT7 982 aa19.67■□□□□ 0.74
C9orf3-206ENST00000428313 ZBTB40Q9NUA8 1239 aa19.67■□□□□ 0.74
C9orf3-206ENST00000428313 TTC37Q6PGP7 1564 aa19.67■□□□□ 0.74
C9orf3-206ENST00000428313 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
C9orf3-206ENST00000428313 LNPKQ9C0E8 428 aa19.67■□□□□ 0.74
C9orf3-206ENST00000428313 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
C9orf3-206ENST00000428313 U2AF2P26368 475 aaKnown RBP eCLIP19.65■□□□□ 0.743e-8■□□□□ 10.2
C9orf3-206ENST00000428313 CCDC66A2RUB6 948 aa19.65■□□□□ 0.74
C9orf3-206ENST00000428313 VGLL3A8MV65 326 aa19.65■□□□□ 0.74
C9orf3-206ENST00000428313 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
C9orf3-206ENST00000428313 RNF214Q8ND24 703 aa19.65■□□□□ 0.74
C9orf3-206ENST00000428313 SYAP1Q96A49 352 aaPredicted RBP19.65■□□□□ 0.74
C9orf3-206ENST00000428313 CHAF1AQ13111 956 aaPredicted RBP19.64■□□□□ 0.74
C9orf3-206ENST00000428313 SYCP1Q15431 976 aa19.64■□□□□ 0.74
C9orf3-206ENST00000428313 NEUROD2Q15784 382 aa19.64■□□□□ 0.74
C9orf3-206ENST00000428313 ADGRL1O94910 1474 aa19.64■□□□□ 0.73
C9orf3-206ENST00000428313 IRX5P78411 483 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-206ENST00000428313 RRP7AQ9Y3A4 280 aaKnown RBP19.64■□□□□ 0.73
C9orf3-206ENST00000428313 DUOX2Q9NRD8 1548 aa19.64■□□□□ 0.73
C9orf3-206ENST00000428313 CDC45O75419 566 aa19.63■□□□□ 0.73
C9orf3-206ENST00000428313 PKP1Q13835 747 aa19.63■□□□□ 0.73
C9orf3-206ENST00000428313 DNAJC2Q99543 621 aaKnown RBP19.63■□□□□ 0.73
C9orf3-206ENST00000428313 SMC4Q9NTJ3 1288 aa19.63■□□□□ 0.73
C9orf3-206ENST00000428313 ZDHHC9Q9Y397 364 aa19.63■□□□□ 0.73
C9orf3-206ENST00000428313 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
C9orf3-206ENST00000428313 PHF14O94880 888 aa19.62■□□□□ 0.73
C9orf3-206ENST00000428313 GCC1Q96CN9 775 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms