RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 RBM6P78332 1123 aaKnown RBP27.44■■□□□ 1.98
COL9A2-204ENST00000427563 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
COL9A2-204ENST00000427563 PPIP5K1Q6PFW1 1433 aa27.41■■□□□ 1.98
COL9A2-204ENST00000427563 TRPC5Q9UL62 973 aaPredicted RBP27.41■■□□□ 1.98
COL9A2-204ENST00000427563 NWD2Q9ULI1 1742 aa27.38■■□□□ 1.97
COL9A2-204ENST00000427563 PHRF1Q9P1Y6 1649 aaKnown RBP27.38■■□□□ 1.97
COL9A2-204ENST00000427563 PAK3O75914 559 aaPredicted RBP27.38■■□□□ 1.97
COL9A2-204ENST00000427563 GLI3P10071 1580 aa27.37■■□□□ 1.97
COL9A2-204ENST00000427563 NRAPQ86VF7 1730 aa27.36■■□□□ 1.97
COL9A2-204ENST00000427563 CARD11Q9BXL7 1154 aa27.36■■□□□ 1.97
COL9A2-204ENST00000427563 FAM83GA6ND36 823 aa27.35■■□□□ 1.97
COL9A2-204ENST00000427563 HAP1P54257 671 aaPredicted RBP27.35■■□□□ 1.97
COL9A2-204ENST00000427563 UNC5CLQ8IV45 518 aa27.35■■□□□ 1.97
COL9A2-204ENST00000427563 EVC2Q86UK5 1308 aa27.35■■□□□ 1.97
COL9A2-204ENST00000427563 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
COL9A2-204ENST00000427563 CABP1Q9NZU7 370 aa27.33■■□□□ 1.97
COL9A2-204ENST00000427563 SBNO2Q9Y2G9 1366 aa27.33■■□□□ 1.97
COL9A2-204ENST00000427563 COL14A1Q05707 1796 aaKnown RBP27.32■■□□□ 1.96
COL9A2-204ENST00000427563 AKAP12Q02952 1782 aa27.31■■□□□ 1.96
COL9A2-204ENST00000427563 NUTM2GQ5VZR2 741 aa27.31■■□□□ 1.96
COL9A2-204ENST00000427563 GJD4Q96KN9 370 aaPredicted RBP27.31■■□□□ 1.96
COL9A2-204ENST00000427563 UPF1Q92900 1129 aaKnown RBP eCLIP27.29■■□□□ 1.96
COL9A2-204ENST00000427563 USP6P35125 1406 aa27.29■■□□□ 1.96
COL9A2-204ENST00000427563 SSH2Q76I76 1423 aa27.29■■□□□ 1.96
COL9A2-204ENST00000427563 NRKQ7Z2Y5 1582 aa27.28■■□□□ 1.96
COL9A2-204ENST00000427563 PIK3C2AO00443 1686 aa27.24■■□□□ 1.95
COL9A2-204ENST00000427563 USP19O94966 1318 aa27.24■■□□□ 1.95
COL9A2-204ENST00000427563 VPS72Q15906 364 aa27.24■■□□□ 1.95
COL9A2-204ENST00000427563 BRWD3Q6RI45 1802 aa27.24■■□□□ 1.95
COL9A2-204ENST00000427563 KIAA0232Q92628 1395 aa27.23■■□□□ 1.95
COL9A2-204ENST00000427563 ABTB2Q8N961 1025 aa27.23■■□□□ 1.95
COL9A2-204ENST00000427563 BTG4Q9NY30 223 aa27.22■■□□□ 1.95
COL9A2-204ENST00000427563 BRD4O60885 1362 aaPredicted RBP27.22■■□□□ 1.95
COL9A2-204ENST00000427563 ATAD2Q6PL18 1390 aa27.22■■□□□ 1.95
COL9A2-204ENST00000427563 CPSF1Q10570 1443 aaKnown RBP27.21■■□□□ 1.95
COL9A2-204ENST00000427563 CD163L1Q9NR16 1453 aa27.2■■□□□ 1.95
COL9A2-204ENST00000427563 MON2Q7Z3U7 1717 aa27.2■■□□□ 1.94
COL9A2-204ENST00000427563 TESK2Q96S53 571 aa27.2■■□□□ 1.94
COL9A2-204ENST00000427563 CLSPNQ9HAW4 1339 aa27.19■■□□□ 1.94
COL9A2-204ENST00000427563 LMO7Q8WWI1 1683 aa27.18■■□□□ 1.94
COL9A2-204ENST00000427563 SLIT3O75094 1523 aa27.18■■□□□ 1.94
COL9A2-204ENST00000427563 ZC3H6P61129 1189 aaKnown RBP27.18■■□□□ 1.94
COL9A2-204ENST00000427563 CHRNA2Q15822 529 aa27.18■■□□□ 1.94
COL9A2-204ENST00000427563 PRDM11Q9NQV5 511 aa27.18■■□□□ 1.94
COL9A2-204ENST00000427563 EP400Q96L91 3159 aa27.18■■□□□ 1.94
COL9A2-204ENST00000427563 ST20-MTHFSA0A0A6YYL1 179 aa27.16■■□□□ 1.94
COL9A2-204ENST00000427563 CPDO75976 1380 aa27.14■■□□□ 1.94
COL9A2-204ENST00000427563 ONECUT3O60422 494 aaPredicted RBP27.14■■□□□ 1.94
COL9A2-204ENST00000427563 NLRP13Q86W25 1043 aa27.14■■□□□ 1.94
COL9A2-204ENST00000427563 CAMTA1Q9Y6Y1 1673 aa27.14■■□□□ 1.93
COL9A2-204ENST00000427563 TTC21BQ7Z4L5 1316 aa27.14■■□□□ 1.93
COL9A2-204ENST00000427563 GCP02774 474 aa27.13■■□□□ 1.93
COL9A2-204ENST00000427563 ZNF692Q9BU19 519 aaPredicted RBP27.12■■□□□ 1.93
COL9A2-204ENST00000427563 CCDC9Q9Y3X0 531 aaKnown RBP27.12■■□□□ 1.93
COL9A2-204ENST00000427563 SPATA31A5Q5VU36 1347 aa27.11■■□□□ 1.93
COL9A2-204ENST00000427563 SPATA31A7Q8IWB4 1347 aa27.11■■□□□ 1.93
COL9A2-204ENST00000427563 KTN1Q86UP2 1357 aaKnown RBP27.1■■□□□ 1.93
COL9A2-204ENST00000427563 NLRP6P59044 892 aa27.1■■□□□ 1.93
COL9A2-204ENST00000427563 SEPT12Q8IYM1 358 aa27.1■■□□□ 1.93
COL9A2-204ENST00000427563 SLC12A5Q9H2X9 1139 aa27.1■■□□□ 1.93
COL9A2-204ENST00000427563 TIMELESSQ9UNS1 1208 aa27.1■■□□□ 1.93
COL9A2-204ENST00000427563 USP47Q96K76 1375 aa27.09■■□□□ 1.93
COL9A2-204ENST00000427563 COL18A1P39060 1754 aa27.09■■□□□ 1.93
COL9A2-204ENST00000427563 THSD7AQ9UPZ6 1657 aa27.08■■□□□ 1.93
COL9A2-204ENST00000427563 USP54Q70EL1 1684 aa27.08■■□□□ 1.92
COL9A2-204ENST00000427563 PUS7Q96PZ0 661 aaKnown RBP27.07■■□□□ 1.92
COL9A2-204ENST00000427563 FAM98CQ17RN3 349 aaKnown RBP27.06■■□□□ 1.92
COL9A2-204ENST00000427563 TTC21AQ8NDW8 1320 aa27.06■■□□□ 1.92
COL9A2-204ENST00000427563 ZRANB1Q9UGI0 708 aa27.05■■□□□ 1.92
COL9A2-204ENST00000427563 TMC1Q8TDI8 760 aa27.04■■□□□ 1.92
COL9A2-204ENST00000427563 STRN4Q9NRL3 753 aa27.04■■□□□ 1.92
COL9A2-204ENST00000427563 SPATA31A1Q5TZJ5 1347 aa27.04■■□□□ 1.92
COL9A2-204ENST00000427563 A0A1W2PP64 1363 aa27.04■■□□□ 1.92
COL9A2-204ENST00000427563 NFAT5O94916 1531 aa27.04■■□□□ 1.92
COL9A2-204ENST00000427563 COL5A2P05997 1499 aaPredicted RBP27.02■■□□□ 1.92
COL9A2-204ENST00000427563 RGPD5Q99666 1765 aa27.02■■□□□ 1.92
COL9A2-204ENST00000427563 CCER1Q8TC90 406 aaPredicted RBP27.01■■□□□ 1.91
COL9A2-204ENST00000427563 LARP1Q6PKG0 1096 aaKnown RBP27■■□□□ 1.91
COL9A2-204ENST00000427563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27■■□□□ 1.91
COL9A2-204ENST00000427563 AATKQ6ZMQ8 1374 aa26.99■■□□□ 1.91
COL9A2-204ENST00000427563 USP31Q70CQ4 1352 aa26.99■■□□□ 1.91
COL9A2-204ENST00000427563 NME9Q86XW9 330 aa26.99■■□□□ 1.91
COL9A2-204ENST00000427563 EDC4Q6P2E9 1401 aaKnown RBP26.99■■□□□ 1.91
COL9A2-204ENST00000427563 KRT27Q7Z3Y8 459 aa26.97■■□□□ 1.91
COL9A2-204ENST00000427563 ZBTB7CA1YPR0 619 aa26.96■■□□□ 1.91
COL9A2-204ENST00000427563 HDGFL2Q7Z4V5 671 aaPredicted RBP26.96■■□□□ 1.91
COL9A2-204ENST00000427563 ARHGEF25Q86VW2 580 aa26.96■■□□□ 1.91
COL9A2-204ENST00000427563 AXIN2Q9Y2T1 843 aa26.96■■□□□ 1.91
COL9A2-204ENST00000427563 SOX12O15370 315 aa26.95■■□□□ 1.9
COL9A2-204ENST00000427563 EVA1CP58658 441 aa26.95■■□□□ 1.9
COL9A2-204ENST00000427563 NINLQ9Y2I6 1382 aa26.95■■□□□ 1.9
COL9A2-204ENST00000427563 A0A0G2JS52 829 aa26.94■■□□□ 1.9
COL9A2-204ENST00000427563 MYT1Q01538 1121 aa26.94■■□□□ 1.9
COL9A2-204ENST00000427563 MYOM1P52179 1685 aa26.93■■□□□ 1.9
COL9A2-204ENST00000427563 TERF2IPQ9NYB0 399 aa26.93■■□□□ 1.9
COL9A2-204ENST00000427563 USP35Q9P2H5 1018 aa26.93■■□□□ 1.9
COL9A2-204ENST00000427563 OVOS2A0A0J9YW53 1432 aa26.92■■□□□ 1.9
COL9A2-204ENST00000427563 OVOS2Q6IE36 1432 aa26.92■■□□□ 1.9
COL9A2-204ENST00000427563 TMF1P82094 1093 aa26.92■■□□□ 1.9
COL9A2-204ENST00000427563 KCNH5Q8NCM2 988 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms