RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 ADGRB2O60241 1585 aa12.9□□□□□ -0.35
VNN3-208ENST00000427187 DLC1Q96QB1 1528 aa12.89□□□□□ -0.35
VNN3-208ENST00000427187 TRAK1Q9UPV9 953 aa12.89□□□□□ -0.35
VNN3-208ENST00000427187 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
VNN3-208ENST00000427187 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
VNN3-208ENST00000427187 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
VNN3-208ENST00000427187 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
VNN3-208ENST00000427187 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
VNN3-208ENST00000427187 EZH2Q15910 746 aaKnown RBP12.88□□□□□ -0.35
VNN3-208ENST00000427187 GPRASP1Q5JY77 1395 aa12.88□□□□□ -0.35
VNN3-208ENST00000427187 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
VNN3-208ENST00000427187 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
VNN3-208ENST00000427187 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
VNN3-208ENST00000427187 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
VNN3-208ENST00000427187 TRIM37O94972 964 aa12.85□□□□□ -0.35
VNN3-208ENST00000427187 NGDNQ8NEJ9 315 aaKnown RBP12.85□□□□□ -0.35
VNN3-208ENST00000427187 STRN4Q9NRL3 753 aa12.85□□□□□ -0.35
VNN3-208ENST00000427187 KIAA0232Q92628 1395 aa12.84□□□□□ -0.35
VNN3-208ENST00000427187 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
VNN3-208ENST00000427187 USP35Q9P2H5 1018 aa12.84□□□□□ -0.35
VNN3-208ENST00000427187 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
VNN3-208ENST00000427187 DISP2A7MBM2 1401 aa12.84□□□□□ -0.35
VNN3-208ENST00000427187 SPATA31A1Q5TZJ5 1347 aa12.84□□□□□ -0.35
VNN3-208ENST00000427187 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
VNN3-208ENST00000427187 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
VNN3-208ENST00000427187 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
VNN3-208ENST00000427187 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
VNN3-208ENST00000427187 EIF3AQ14152 1382 aaKnown RBP12.81□□□□□ -0.36
VNN3-208ENST00000427187 APBA3O96018 575 aa12.81□□□□□ -0.36
VNN3-208ENST00000427187 ATP7BP35670 1465 aa12.8□□□□□ -0.36
VNN3-208ENST00000427187 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
VNN3-208ENST00000427187 ARHGEF28Q8N1W1 1705 aaKnown RBP12.8□□□□□ -0.36
VNN3-208ENST00000427187 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
VNN3-208ENST00000427187 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
VNN3-208ENST00000427187 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
VNN3-208ENST00000427187 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
VNN3-208ENST00000427187 RREB1Q92766 1687 aa12.79□□□□□ -0.36
VNN3-208ENST00000427187 SSH2Q76I76 1423 aa12.78□□□□□ -0.36
VNN3-208ENST00000427187 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.36
VNN3-208ENST00000427187 RAB3GAP2Q9H2M9 1393 aa12.77□□□□□ -0.37
VNN3-208ENST00000427187 CAMTA1Q9Y6Y1 1673 aa12.77□□□□□ -0.37
VNN3-208ENST00000427187 EVA1CP58658 441 aa12.76□□□□□ -0.37
VNN3-208ENST00000427187 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
VNN3-208ENST00000427187 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
VNN3-208ENST00000427187 TOPAZ1Q8N9V7 1692 aa12.76□□□□□ -0.37
VNN3-208ENST00000427187 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
VNN3-208ENST00000427187 LMO7Q8WWI1 1683 aa12.74□□□□□ -0.37
VNN3-208ENST00000427187 ACEP12821 1306 aa12.74□□□□□ -0.37
VNN3-208ENST00000427187 YY1P25490 414 aa12.74□□□□□ -0.37
VNN3-208ENST00000427187 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
VNN3-208ENST00000427187 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
VNN3-208ENST00000427187 ZBTB7CA1YPR0 619 aa12.73□□□□□ -0.37
VNN3-208ENST00000427187 NBPF8Q3BBV2 869 aa12.73□□□□□ -0.37
VNN3-208ENST00000427187 TCP11L2Q8N4U5 519 aa12.73□□□□□ -0.37
VNN3-208ENST00000427187 ABTB2Q8N961 1025 aa12.73□□□□□ -0.37
VNN3-208ENST00000427187 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
VNN3-208ENST00000427187 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
VNN3-208ENST00000427187 PPP1R1BQ9UD71 204 aaPredicted RBP12.72□□□□□ -0.37
VNN3-208ENST00000427187 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.38
VNN3-208ENST00000427187 UTRNP46939 3433 aa12.7□□□□□ -0.38
VNN3-208ENST00000427187 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
VNN3-208ENST00000427187 COL5A2P05997 1499 aaPredicted RBP12.7□□□□□ -0.38
VNN3-208ENST00000427187 USP19O94966 1318 aa12.69□□□□□ -0.38
VNN3-208ENST00000427187 PTF1AQ7RTS3 328 aa12.69□□□□□ -0.38
VNN3-208ENST00000427187 SPON1Q9HCB6 807 aa12.69□□□□□ -0.38
VNN3-208ENST00000427187 CPDO75976 1380 aa12.69□□□□□ -0.38
VNN3-208ENST00000427187 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
VNN3-208ENST00000427187 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
VNN3-208ENST00000427187 KCNQ2O43526 872 aa12.68□□□□□ -0.38
VNN3-208ENST00000427187 GCP02774 474 aa12.68□□□□□ -0.38
VNN3-208ENST00000427187 LRRC37A3O60309 1634 aa12.68□□□□□ -0.38
VNN3-208ENST00000427187 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
VNN3-208ENST00000427187 SBF2Q86WG5 1849 aa12.67□□□□□ -0.38
VNN3-208ENST00000427187 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
VNN3-208ENST00000427187 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
VNN3-208ENST00000427187 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
VNN3-208ENST00000427187 OVOS2A0A0G2JMS6 1433 aa12.66□□□□□ -0.38
VNN3-208ENST00000427187 OVOS2A0A0J9YW53 1432 aa12.66□□□□□ -0.38
VNN3-208ENST00000427187 CRB1P82279 1406 aa12.66□□□□□ -0.38
VNN3-208ENST00000427187 OVOS2Q6IE36 1432 aa12.66□□□□□ -0.38
VNN3-208ENST00000427187 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
VNN3-208ENST00000427187 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
VNN3-208ENST00000427187 NLRP13Q86W25 1043 aa12.66□□□□□ -0.38
VNN3-208ENST00000427187 THRAP3Q9Y2W1 955 aaKnown RBP12.66□□□□□ -0.38
VNN3-208ENST00000427187 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
VNN3-208ENST00000427187 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
VNN3-208ENST00000427187 WNK3Q9BYP7 1800 aa12.64□□□□□ -0.39
VNN3-208ENST00000427187 MYOM1P52179 1685 aa12.64□□□□□ -0.39
VNN3-208ENST00000427187 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
VNN3-208ENST00000427187 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
VNN3-208ENST00000427187 KIAA1210Q9ULL0 1709 aa12.63□□□□□ -0.39
VNN3-208ENST00000427187 ZBTB7AO95365 584 aa12.63□□□□□ -0.39
VNN3-208ENST00000427187 NLRP6P59044 892 aa12.63□□□□□ -0.39
VNN3-208ENST00000427187 DDB1Q16531 1140 aa12.63□□□□□ -0.39
VNN3-208ENST00000427187 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
VNN3-208ENST00000427187 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
VNN3-208ENST00000427187 COL18A1P39060 1754 aa12.62□□□□□ -0.39
VNN3-208ENST00000427187 AKAP12Q02952 1782 aa12.62□□□□□ -0.39
VNN3-208ENST00000427187 PIK3C2AO00443 1686 aa12.62□□□□□ -0.39
VNN3-208ENST00000427187 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms