RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 NBPF8Q3BBV2 869 aa10.65□□□□□ -0.7
LINC01049-201ENST00000426840 PROSER2Q86WR7 435 aaPredicted RBP10.65□□□□□ -0.7
LINC01049-201ENST00000426840 MFRPQ9BY79 579 aa10.65□□□□□ -0.7
LINC01049-201ENST00000426840 TONSLQ96HA7 1378 aa10.65□□□□□ -0.71
LINC01049-201ENST00000426840 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
LINC01049-201ENST00000426840 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
LINC01049-201ENST00000426840 PRAG1Q86YV5 1406 aa10.64□□□□□ -0.71
LINC01049-201ENST00000426840 CPS1P31327 1500 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 LRRC7Q96NW7 1537 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 NLRP6P59044 892 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 ILDR1Q86SU0 546 aaPredicted RBP10.63□□□□□ -0.71
LINC01049-201ENST00000426840 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 STK26Q9P289 416 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 NWD1Q149M9 1564 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
LINC01049-201ENST00000426840 ABCC11Q96J66 1382 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 ASXL1Q8IXJ9 1541 aa10.63□□□□□ -0.71
LINC01049-201ENST00000426840 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
LINC01049-201ENST00000426840 TMEM94Q12767 1356 aa10.62□□□□□ -0.71
LINC01049-201ENST00000426840 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
LINC01049-201ENST00000426840 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
LINC01049-201ENST00000426840 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
LINC01049-201ENST00000426840 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
LINC01049-201ENST00000426840 ROBO2Q9HCK4 1378 aa10.61□□□□□ -0.71
LINC01049-201ENST00000426840 XRN1Q8IZH2 1706 aaKnown RBP10.61□□□□□ -0.71
LINC01049-201ENST00000426840 NKTRP30414 1462 aaKnown RBP10.61□□□□□ -0.71
LINC01049-201ENST00000426840 ADGRB1O14514 1584 aa10.6□□□□□ -0.71
LINC01049-201ENST00000426840 WAPLQ7Z5K2 1190 aa10.6□□□□□ -0.71
LINC01049-201ENST00000426840 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
LINC01049-201ENST00000426840 NCOA3Q9Y6Q9 1424 aa10.59□□□□□ -0.71
LINC01049-201ENST00000426840 LAMC1P11047 1609 aa10.59□□□□□ -0.71
LINC01049-201ENST00000426840 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
LINC01049-201ENST00000426840 G3V3G9 751 aa10.59□□□□□ -0.71
LINC01049-201ENST00000426840 L3MBTL3Q96JM7 780 aaPredicted RBP10.59□□□□□ -0.71
LINC01049-201ENST00000426840 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
LINC01049-201ENST00000426840 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
LINC01049-201ENST00000426840 IQSEC2Q5JU85 1478 aa10.59□□□□□ -0.71
LINC01049-201ENST00000426840 TECPR2O15040 1411 aa10.58□□□□□ -0.72
LINC01049-201ENST00000426840 MAMSTRQ6ZN01 415 aa10.58□□□□□ -0.72
LINC01049-201ENST00000426840 PTCH1Q13635 1447 aa10.58□□□□□ -0.72
LINC01049-201ENST00000426840 PLEKHH1Q9ULM0 1364 aa10.57□□□□□ -0.72
LINC01049-201ENST00000426840 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
LINC01049-201ENST00000426840 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
LINC01049-201ENST00000426840 FAM135BQ49AJ0 1406 aa10.57□□□□□ -0.72
LINC01049-201ENST00000426840 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
LINC01049-201ENST00000426840 PRAM1Q96QH2 718 aa10.56□□□□□ -0.72
LINC01049-201ENST00000426840 GPRASP1Q5JY77 1395 aa10.55□□□□□ -0.72
LINC01049-201ENST00000426840 DLC1Q96QB1 1528 aa10.55□□□□□ -0.72
LINC01049-201ENST00000426840 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
LINC01049-201ENST00000426840 ROCK2O75116 1388 aaKnown RBP10.54□□□□□ -0.72
LINC01049-201ENST00000426840 UBAP1LF5GYI3 381 aa10.54□□□□□ -0.72
LINC01049-201ENST00000426840 TOM1O60784 492 aa10.54□□□□□ -0.72
LINC01049-201ENST00000426840 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
LINC01049-201ENST00000426840 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
LINC01049-201ENST00000426840 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
LINC01049-201ENST00000426840 POGKQ9P215 609 aa10.54□□□□□ -0.72
LINC01049-201ENST00000426840 RALGAPBQ86X10 1494 aa10.54□□□□□ -0.72
LINC01049-201ENST00000426840 MSH6P52701 1360 aa10.53□□□□□ -0.72
LINC01049-201ENST00000426840 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.53□□□□□ -0.72
LINC01049-201ENST00000426840 PPP1R37O75864 691 aa10.53□□□□□ -0.72
LINC01049-201ENST00000426840 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01049-201ENST00000426840 FBXO41Q8TF61 875 aa10.53□□□□□ -0.72
LINC01049-201ENST00000426840 ADGRL3Q9HAR2 1447 aa10.52□□□□□ -0.73
LINC01049-201ENST00000426840 ATF3P18847 181 aa10.52□□□□□ -0.73
LINC01049-201ENST00000426840 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
LINC01049-201ENST00000426840 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
LINC01049-201ENST00000426840 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
LINC01049-201ENST00000426840 MICALL2Q8IY33 904 aa10.51□□□□□ -0.73
LINC01049-201ENST00000426840 SLAIN1Q8ND83 568 aa10.51□□□□□ -0.73
LINC01049-201ENST00000426840 MINK1Q8N4C8 1332 aaPredicted RBP10.51□□□□□ -0.73
LINC01049-201ENST00000426840 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
LINC01049-201ENST00000426840 NALCNQ8IZF0 1738 aa10.5□□□□□ -0.73
LINC01049-201ENST00000426840 ARHGEF28Q8N1W1 1705 aaKnown RBP10.5□□□□□ -0.73
LINC01049-201ENST00000426840 DCCP43146 1447 aa10.5□□□□□ -0.73
LINC01049-201ENST00000426840 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
LINC01049-201ENST00000426840 BBXQ8WY36 941 aaPredicted RBP10.49□□□□□ -0.73
LINC01049-201ENST00000426840 HIRIP3Q9BW71 556 aaPredicted RBP10.49□□□□□ -0.73
LINC01049-201ENST00000426840 WASLO00401 505 aaPredicted RBP10.48□□□□□ -0.73
LINC01049-201ENST00000426840 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
LINC01049-201ENST00000426840 MST1RQ04912 1400 aa10.48□□□□□ -0.73
LINC01049-201ENST00000426840 ST20-MTHFSA0A0A6YYL1 179 aa10.47□□□□□ -0.73
LINC01049-201ENST00000426840 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
LINC01049-201ENST00000426840 ORAI2Q96SN7 254 aa10.47□□□□□ -0.73
LINC01049-201ENST00000426840 CDK19Q9BWU1 502 aa10.47□□□□□ -0.73
LINC01049-201ENST00000426840 TMEM121BQ9BXQ6 578 aaPredicted RBP10.47□□□□□ -0.73
LINC01049-201ENST00000426840 BRINP3Q76B58 766 aa10.46□□□□□ -0.73
LINC01049-201ENST00000426840 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.74
LINC01049-201ENST00000426840 CDC42BPGQ6DT37 1551 aa10.46□□□□□ -0.74
LINC01049-201ENST00000426840 PRR36Q9H6K5 1346 aa10.45□□□□□ -0.74
LINC01049-201ENST00000426840 TESK2Q96S53 571 aa10.45□□□□□ -0.74
LINC01049-201ENST00000426840 ADGRB2O60241 1585 aa10.44□□□□□ -0.74
LINC01049-201ENST00000426840 EIF3AQ14152 1382 aaKnown RBP10.44□□□□□ -0.74
LINC01049-201ENST00000426840 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
LINC01049-201ENST00000426840 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
LINC01049-201ENST00000426840 FMN2Q9NZ56 1722 aa10.44□□□□□ -0.74
LINC01049-201ENST00000426840 USP47Q96K76 1375 aa10.43□□□□□ -0.74
LINC01049-201ENST00000426840 SBNO2Q9Y2G9 1366 aa10.43□□□□□ -0.74
LINC01049-201ENST00000426840 ESCO1Q5FWF5 840 aa10.43□□□□□ -0.74
LINC01049-201ENST00000426840 NUDT16Q96DE0 195 aaKnown RBP10.43□□□□□ -0.74
LINC01049-201ENST00000426840 EVC2Q86UK5 1308 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms