RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 ABCA8O94911 1581 aa12.67□□□□□ -0.38
CTCFL-206ENST00000426658 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-206ENST00000426658 CASC1Q6TDU7 716 aa12.67□□□□□ -0.38
CTCFL-206ENST00000426658 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
CTCFL-206ENST00000426658 DIAPH1O60610 1272 aaKnown RBP12.66□□□□□ -0.38
CTCFL-206ENST00000426658 DNTTIP2Q5QJE6 756 aaKnown RBP12.66□□□□□ -0.38
CTCFL-206ENST00000426658 SNX21Q969T3 373 aa12.66□□□□□ -0.38
CTCFL-206ENST00000426658 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-206ENST00000426658 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
CTCFL-206ENST00000426658 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
CTCFL-206ENST00000426658 SMC5Q8IY18 1101 aa12.65□□□□□ -0.38
CTCFL-206ENST00000426658 ATP10AO60312 1499 aa12.65□□□□□ -0.39
CTCFL-206ENST00000426658 FBLN1P23142 703 aa12.64□□□□□ -0.39
CTCFL-206ENST00000426658 ZSCAN30Q86W11 494 aa12.64□□□□□ -0.39
CTCFL-206ENST00000426658 SSFA2P28290 1259 aa12.64□□□□□ -0.39
CTCFL-206ENST00000426658 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
CTCFL-206ENST00000426658 NLRP1Q9C000 1473 aa12.64□□□□□ -0.39
CTCFL-206ENST00000426658 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
CTCFL-206ENST00000426658 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-206ENST00000426658 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
CTCFL-206ENST00000426658 CAVIN1Q6NZI2 390 aaKnown RBP12.63□□□□□ -0.39
CTCFL-206ENST00000426658 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
CTCFL-206ENST00000426658 FAM13BQ9NYF5 915 aa12.63□□□□□ -0.39
CTCFL-206ENST00000426658 UNC13BO14795 1591 aa12.63□□□□□ -0.39
CTCFL-206ENST00000426658 R3HCC1Q9Y3T6 440 aaKnown RBP12.63□□□□□ -0.39
CTCFL-206ENST00000426658 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 NUCB1Q02818 461 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 GAS2L3Q86XJ1 694 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 NUCB2P80303 420 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
CTCFL-206ENST00000426658 GCC1Q96CN9 775 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 CCDC9Q9Y3X0 531 aaKnown RBP12.62□□□□□ -0.39
CTCFL-206ENST00000426658 EID1Q9Y6B2 187 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 IQGAP3Q86VI3 1631 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 CDC45O75419 566 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
CTCFL-206ENST00000426658 KDM5AP29375 1690 aaKnown RBP12.61□□□□□ -0.39
CTCFL-206ENST00000426658 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
CTCFL-206ENST00000426658 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
CTCFL-206ENST00000426658 PDCL3Q9H2J4 239 aa12.61□□□□□ -0.39
CTCFL-206ENST00000426658 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
CTCFL-206ENST00000426658 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
CTCFL-206ENST00000426658 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
CTCFL-206ENST00000426658 PREX2Q70Z35 1606 aa12.6□□□□□ -0.39
CTCFL-206ENST00000426658 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
CTCFL-206ENST00000426658 MYO5CQ9NQX4 1742 aa12.6□□□□□ -0.39
CTCFL-206ENST00000426658 TRAPPC8Q9Y2L5 1435 aa12.59□□□□□ -0.39
CTCFL-206ENST00000426658 ST18O60284 1047 aa12.59□□□□□ -0.39
CTCFL-206ENST00000426658 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
CTCFL-206ENST00000426658 TRIM6-TRIM34B2RNG4 842 aa12.59□□□□□ -0.39
CTCFL-206ENST00000426658 BAG4O95429 457 aaKnown RBP12.59□□□□□ -0.39
CTCFL-206ENST00000426658 TBC1D9Q6ZT07 1266 aa12.59□□□□□ -0.39
CTCFL-206ENST00000426658 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
CTCFL-206ENST00000426658 RABEP1Q15276 862 aa12.58□□□□□ -0.4
CTCFL-206ENST00000426658 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-206ENST00000426658 MADDQ8WXG6 1647 aa12.58□□□□□ -0.4
CTCFL-206ENST00000426658 GAS2L2Q8NHY3 880 aa12.58□□□□□ -0.4
CTCFL-206ENST00000426658 TTC37Q6PGP7 1564 aa12.58□□□□□ -0.4
CTCFL-206ENST00000426658 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-206ENST00000426658 CABP1Q9NZU7 370 aa12.57□□□□□ -0.4
CTCFL-206ENST00000426658 PRPF40AO75400 957 aaKnown RBP12.57□□□□□ -0.4
CTCFL-206ENST00000426658 PTPRTO14522 1441 aa12.57□□□□□ -0.4
CTCFL-206ENST00000426658 PLCH2O75038 1416 aa12.57□□□□□ -0.4
CTCFL-206ENST00000426658 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
CTCFL-206ENST00000426658 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
CTCFL-206ENST00000426658 ALDH1L2Q3SY69 923 aa12.56□□□□□ -0.4
CTCFL-206ENST00000426658 RILPL2Q969X0 211 aa12.56□□□□□ -0.4
CTCFL-206ENST00000426658 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-206ENST00000426658 ABCC11Q96J66 1382 aa12.56□□□□□ -0.4
CTCFL-206ENST00000426658 NOS1P29475 1434 aa12.56□□□□□ -0.4
CTCFL-206ENST00000426658 CEBPAP49715 358 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-206ENST00000426658 CDC42BPBQ9Y5S2 1711 aa12.55□□□□□ -0.4
CTCFL-206ENST00000426658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.55□□□□□ -0.4
CTCFL-206ENST00000426658 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
CTCFL-206ENST00000426658 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
CTCFL-206ENST00000426658 MAP7D2Q96T17 732 aa12.55□□□□□ -0.4
CTCFL-206ENST00000426658 CSPP1Q1MSJ5 1256 aa12.55□□□□□ -0.4
CTCFL-206ENST00000426658 INTS3Q68E01 1043 aaKnown RBP12.55□□□□□ -0.4
CTCFL-206ENST00000426658 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
CTCFL-206ENST00000426658 TRPM2O94759 1503 aa12.55□□□□□ -0.4
CTCFL-206ENST00000426658 OFD1O75665 1012 aa12.54□□□□□ -0.4
CTCFL-206ENST00000426658 OS9Q13438 667 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-206ENST00000426658 IL16Q14005 1332 aa12.54□□□□□ -0.4
CTCFL-206ENST00000426658 MPNDQ8N594 471 aa12.54□□□□□ -0.4
CTCFL-206ENST00000426658 RBM33Q96EV2 1170 aaKnown RBP12.54□□□□□ -0.4
CTCFL-206ENST00000426658 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
CTCFL-206ENST00000426658 RNF214Q8ND24 703 aa12.54□□□□□ -0.4
CTCFL-206ENST00000426658 NGDNQ8NEJ9 315 aaKnown RBP12.54□□□□□ -0.4
CTCFL-206ENST00000426658 XPCQ01831 940 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-206ENST00000426658 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
CTCFL-206ENST00000426658 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
CTCFL-206ENST00000426658 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
CTCFL-206ENST00000426658 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
CTCFL-206ENST00000426658 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
CTCFL-206ENST00000426658 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
CTCFL-206ENST00000426658 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
CTCFL-206ENST00000426658 NSD2O96028 1365 aa12.53□□□□□ -0.4
CTCFL-206ENST00000426658 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
CTCFL-206ENST00000426658 UQCRHLA0A096LP55 91 aa12.53□□□□□ -0.4
CTCFL-206ENST00000426658 UQCRHP07919 91 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms