RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 FAM161AQ3B820 660 aa3.94□□□□□ -1.78
LINC00407-201ENST00000426509 SAMD7Q7Z3H4 446 aa3.94□□□□□ -1.78
LINC00407-201ENST00000426509 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.94□□□□□ -1.78
LINC00407-201ENST00000426509 MIA2Q96PC5 1412 aa3.94□□□□□ -1.78
LINC00407-201ENST00000426509 RAPGEF6Q8TEU7 1601 aa3.93□□□□□ -1.78
LINC00407-201ENST00000426509 NBPF26B4DH59 902 aa3.93□□□□□ -1.78
LINC00407-201ENST00000426509 PIP4K2BP78356 416 aa3.93□□□□□ -1.78
LINC00407-201ENST00000426509 POTEAQ6S8J7 498 aa3.93□□□□□ -1.78
LINC00407-201ENST00000426509 TSR3Q9UJK0 312 aaKnown RBP3.93□□□□□ -1.78
LINC00407-201ENST00000426509 TIMELESSQ9UNS1 1208 aa3.93□□□□□ -1.78
LINC00407-201ENST00000426509 GTF3C3Q9Y5Q9 886 aa3.93□□□□□ -1.78
LINC00407-201ENST00000426509 ADGRG1Q9Y653 693 aa3.93□□□□□ -1.78
LINC00407-201ENST00000426509 IQSEC2Q5JU85 1478 aa3.92□□□□□ -1.78
LINC00407-201ENST00000426509 DNMT1P26358 1616 aaKnown RBP3.92□□□□□ -1.78
LINC00407-201ENST00000426509 PPP1R15AO75807 674 aaPredicted RBP3.92□□□□□ -1.78
LINC00407-201ENST00000426509 FCHSD2O94868 740 aa3.92□□□□□ -1.78
LINC00407-201ENST00000426509 SWT1Q5T5J6 900 aaKnown RBP3.92□□□□□ -1.78
LINC00407-201ENST00000426509 IFFO2Q5TF58 517 aa3.92□□□□□ -1.78
LINC00407-201ENST00000426509 LRCH3Q96II8 777 aa3.92□□□□□ -1.78
LINC00407-201ENST00000426509 YTHDC1Q96MU7 727 aaKnown RBP3.92□□□□□ -1.78
LINC00407-201ENST00000426509 IRX2Q9BZI1 471 aaPredicted RBP3.92□□□□□ -1.78
LINC00407-201ENST00000426509 HPS5Q9UPZ3 1129 aa3.92□□□□□ -1.78
LINC00407-201ENST00000426509 ARHGEF40Q8TER5 1519 aa3.91□□□□□ -1.78
LINC00407-201ENST00000426509 TULP1O00294 542 aaPredicted RBP3.91□□□□□ -1.78
LINC00407-201ENST00000426509 ABCC5O15440 1437 aa3.91□□□□□ -1.78
LINC00407-201ENST00000426509 ITGBL1O95965 494 aaPredicted RBP3.91□□□□□ -1.78
LINC00407-201ENST00000426509 DAPK1P53355 1430 aa3.91□□□□□ -1.78
LINC00407-201ENST00000426509 TROQ12816 1431 aaPredicted RBP3.91□□□□□ -1.78
LINC00407-201ENST00000426509 HIC1Q14526 733 aa3.91□□□□□ -1.78
LINC00407-201ENST00000426509 SMYD5Q6GMV2 418 aa3.91□□□□□ -1.78
LINC00407-201ENST00000426509 ZC3H15Q8WU90 426 aaKnown RBP3.91□□□□□ -1.78
LINC00407-201ENST00000426509 ROCK1Q13464 1354 aa3.9□□□□□ -1.78
LINC00407-201ENST00000426509 ABCA8O94911 1581 aa3.9□□□□□ -1.78
LINC00407-201ENST00000426509 TTC37Q6PGP7 1564 aa3.9□□□□□ -1.78
LINC00407-201ENST00000426509 NCOA1Q15788 1441 aa3.9□□□□□ -1.78
LINC00407-201ENST00000426509 UHRF1BP1Q6BDS2 1440 aa3.9□□□□□ -1.78
LINC00407-201ENST00000426509 RCCD1A6NED2 376 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 GNPATO15228 680 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 PPP4CP60510 307 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 TJAP1Q5JTD0 557 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 NYAP1Q6ZVC0 841 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 GPIHBP1Q8IV16 184 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 PXYLP1Q8TE99 480 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 PHOX2BQ99453 314 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 RRP7BPQ9NSQ0 103 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 KIF14Q15058 1648 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 ALKQ9UM73 1620 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 ATP10BO94823 1461 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 ARHGEF12Q9NZN5 1544 aa3.9□□□□□ -1.79
LINC00407-201ENST00000426509 TONSLQ96HA7 1378 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 APLP1P51693 650 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 RBM46Q8TBY0 533 aaKnown RBP3.89□□□□□ -1.79
LINC00407-201ENST00000426509 TMEM134Q9H6X4 195 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 ADGRL2O95490 1459 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 CAMSAP2Q08AD1 1489 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 NEO1Q92859 1461 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 CROCC2H7BZ55 1655 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 ITSN2Q9NZM3 1697 aa3.89□□□□□ -1.79
LINC00407-201ENST00000426509 GPATCH8Q9UKJ3 1502 aaKnown RBP3.89□□□□□ -1.79
LINC00407-201ENST00000426509 ADGBQ8N7X0 1667 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 PZPP20742 1482 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 OATP04181 439 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 SLC10A3P09131 477 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 DNAJB2P25686 324 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 METTL3Q86U44 580 aaKnown RBP3.88□□□□□ -1.79
LINC00407-201ENST00000426509 ZNF516Q92618 1163 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 CHIC2Q9UKJ5 165 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 ZNF644Q9H582 1327 aaPredicted RBP3.88□□□□□ -1.79
LINC00407-201ENST00000426509 ANKRD30BQ9BXX2 1392 aa3.88□□□□□ -1.79
LINC00407-201ENST00000426509 PREX1Q8TCU6 1659 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 POGZQ7Z3K3 1410 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 FANCAO15360 1455 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 A0A0G2JS52 829 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 HDGFP51858 240 aaKnown RBP3.87□□□□□ -1.79
LINC00407-201ENST00000426509 KCNC4Q03721 635 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 DDX10Q13206 875 aaKnown RBP3.87□□□□□ -1.79
LINC00407-201ENST00000426509 SLF2Q8IX21 1173 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 NLRP7Q8WX94 980 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 MPHOSPH9Q99550 1183 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 CDC42BPAQ5VT25 1732 aa3.87□□□□□ -1.79
LINC00407-201ENST00000426509 RPRD2Q5VT52 1461 aaKnown RBP3.86□□□□□ -1.79
LINC00407-201ENST00000426509 MBD5Q9P267 1494 aa3.86□□□□□ -1.79
LINC00407-201ENST00000426509 SHANK2Q9UPX8 1470 aa3.86□□□□□ -1.79
LINC00407-201ENST00000426509 ZFYVE16Q7Z3T8 1539 aa3.86□□□□□ -1.79
LINC00407-201ENST00000426509 ABCA9Q8IUA7 1624 aa3.86□□□□□ -1.79
LINC00407-201ENST00000426509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.86□□□□□ -1.79
LINC00407-201ENST00000426509 ZMYND10O75800 440 aa3.86□□□□□ -1.79
LINC00407-201ENST00000426509 MTRQ99707 1265 aa3.86□□□□□ -1.79
LINC00407-201ENST00000426509 HIRIP3Q9BW71 556 aaPredicted RBP3.86□□□□□ -1.79
LINC00407-201ENST00000426509 SLC24A3Q9HC58 644 aa3.86□□□□□ -1.79
LINC00407-201ENST00000426509 ZMYM4Q5VZL5 1548 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 KDM5DQ9BY66 1539 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 CAMSAP1Q5T5Y3 1602 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 RICTORQ6R327 1708 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 FER1L4A9Z1Z3 1794 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 CCER2I3L3R5 266 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 IRF6O14896 467 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 RNF40O75150 1001 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 BARGINQ6ZT62 677 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 NKX2-3Q8TAU0 364 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms