RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
SNX3-204ENST00000426155 EVC2Q86UK5 1308 aa19.37■□□□□ 0.69
SNX3-204ENST00000426155 CLSPNQ9HAW4 1339 aa19.37■□□□□ 0.69
SNX3-204ENST00000426155 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
SNX3-204ENST00000426155 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
SNX3-204ENST00000426155 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.36■□□□□ 0.69
SNX3-204ENST00000426155 SBNO2Q9Y2G9 1366 aa19.35■□□□□ 0.69
SNX3-204ENST00000426155 PLEKHG3A1L390 1219 aa19.35■□□□□ 0.69
SNX3-204ENST00000426155 NRKQ7Z2Y5 1582 aa19.33■□□□□ 0.69
SNX3-204ENST00000426155 HAP1P54257 671 aaPredicted RBP19.33■□□□□ 0.68
SNX3-204ENST00000426155 CABP1Q9NZU7 370 aa19.33■□□□□ 0.68
SNX3-204ENST00000426155 USP21Q9UK80 565 aa19.32■□□□□ 0.68
SNX3-204ENST00000426155 BCL9LQ86UU0 1499 aa19.32■□□□□ 0.68
SNX3-204ENST00000426155 MON2Q7Z3U7 1717 aa19.31■□□□□ 0.68
SNX3-204ENST00000426155 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
SNX3-204ENST00000426155 SLIT2O94813 1529 aa19.31■□□□□ 0.68
SNX3-204ENST00000426155 PIK3C2AO00443 1686 aa19.31■□□□□ 0.68
SNX3-204ENST00000426155 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
SNX3-204ENST00000426155 FNBP4Q8N3X1 1017 aaPredicted RBP19.31■□□□□ 0.68
SNX3-204ENST00000426155 NRAPQ86VF7 1730 aa19.31■□□□□ 0.68
SNX3-204ENST00000426155 QTRT2Q9H974 415 aaKnown RBP19.3■□□□□ 0.68
SNX3-204ENST00000426155 USP6P35125 1406 aa19.3■□□□□ 0.68
SNX3-204ENST00000426155 ATRNO75882 1429 aa19.29■□□□□ 0.68
SNX3-204ENST00000426155 ST20-MTHFSA0A0A6YYL1 179 aa19.29■□□□□ 0.68
SNX3-204ENST00000426155 USP47Q96K76 1375 aa19.29■□□□□ 0.68
SNX3-204ENST00000426155 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
SNX3-204ENST00000426155 RGS12O14924 1447 aa19.28■□□□□ 0.68
SNX3-204ENST00000426155 RXRBP28702 533 aa19.28■□□□□ 0.68
SNX3-204ENST00000426155 ATAD2Q6PL18 1390 aa19.28■□□□□ 0.68
SNX3-204ENST00000426155 TESK2Q96S53 571 aa19.27■□□□□ 0.68
SNX3-204ENST00000426155 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
SNX3-204ENST00000426155 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
SNX3-204ENST00000426155 GLI3P10071 1580 aa19.26■□□□□ 0.67
SNX3-204ENST00000426155 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
SNX3-204ENST00000426155 SSH2Q76I76 1423 aa19.25■□□□□ 0.67
SNX3-204ENST00000426155 FAM83GA6ND36 823 aa19.24■□□□□ 0.67
SNX3-204ENST00000426155 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
SNX3-204ENST00000426155 TRPC5Q9UL62 973 aaPredicted RBP19.24■□□□□ 0.67
SNX3-204ENST00000426155 CPSF1Q10570 1443 aaKnown RBP19.24■□□□□ 0.67
SNX3-204ENST00000426155 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
SNX3-204ENST00000426155 KIAA0232Q92628 1395 aa19.21■□□□□ 0.67
SNX3-204ENST00000426155 UNC5CLQ8IV45 518 aa19.21■□□□□ 0.67
SNX3-204ENST00000426155 USP19O94966 1318 aa19.21■□□□□ 0.67
SNX3-204ENST00000426155 SLIT3O75094 1523 aa19.2■□□□□ 0.66
SNX3-204ENST00000426155 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
SNX3-204ENST00000426155 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
SNX3-204ENST00000426155 BRWD3Q6RI45 1802 aa19.2■□□□□ 0.66
SNX3-204ENST00000426155 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
SNX3-204ENST00000426155 ZC3H6P61129 1189 aaKnown RBP19.19■□□□□ 0.66
SNX3-204ENST00000426155 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
SNX3-204ENST00000426155 MYOM1P52179 1685 aa19.19■□□□□ 0.66
SNX3-204ENST00000426155 LMO7Q8WWI1 1683 aa19.19■□□□□ 0.66
SNX3-204ENST00000426155 CHRNA2Q15822 529 aa19.18■□□□□ 0.66
SNX3-204ENST00000426155 PRDM11Q9NQV5 511 aa19.18■□□□□ 0.66
SNX3-204ENST00000426155 BTG4Q9NY30 223 aa19.18■□□□□ 0.66
SNX3-204ENST00000426155 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
SNX3-204ENST00000426155 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
SNX3-204ENST00000426155 USP54Q70EL1 1684 aa19.17■□□□□ 0.66
SNX3-204ENST00000426155 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
SNX3-204ENST00000426155 GJD4Q96KN9 370 aaPredicted RBP19.17■□□□□ 0.66
SNX3-204ENST00000426155 NLRP6P59044 892 aa19.16■□□□□ 0.66
SNX3-204ENST00000426155 NLRP13Q86W25 1043 aa19.16■□□□□ 0.66
SNX3-204ENST00000426155 ZNF692Q9BU19 519 aaPredicted RBP19.15■□□□□ 0.66
SNX3-204ENST00000426155 RGPD5Q99666 1765 aa19.14■□□□□ 0.66
SNX3-204ENST00000426155 VPS72Q15906 364 aa19.14■□□□□ 0.65
SNX3-204ENST00000426155 CAMTA1Q9Y6Y1 1673 aa19.14■□□□□ 0.65
SNX3-204ENST00000426155 COL18A1P39060 1754 aa19.14■□□□□ 0.65
SNX3-204ENST00000426155 GCP02774 474 aa19.13■□□□□ 0.65
SNX3-204ENST00000426155 HOXD11P31277 338 aaPredicted RBP19.13■□□□□ 0.65
SNX3-204ENST00000426155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.13■□□□□ 0.65
SNX3-204ENST00000426155 ZRANB1Q9UGI0 708 aa19.13■□□□□ 0.65
SNX3-204ENST00000426155 CCDC9Q9Y3X0 531 aaKnown RBP19.13■□□□□ 0.65
SNX3-204ENST00000426155 NFAT5O94916 1531 aa19.12■□□□□ 0.65
SNX3-204ENST00000426155 CPDO75976 1380 aa19.12■□□□□ 0.65
SNX3-204ENST00000426155 TTC21AQ8NDW8 1320 aa19.12■□□□□ 0.65
SNX3-204ENST00000426155 TMF1P82094 1093 aa19.12■□□□□ 0.65
SNX3-204ENST00000426155 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
SNX3-204ENST00000426155 LTN1O94822 1766 aa19.11■□□□□ 0.65
SNX3-204ENST00000426155 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
SNX3-204ENST00000426155 ZBTB7CA1YPR0 619 aa19.11■□□□□ 0.65
SNX3-204ENST00000426155 SOX12O15370 315 aa19.11■□□□□ 0.65
SNX3-204ENST00000426155 HDGFL2Q7Z4V5 671 aaPredicted RBP19.11■□□□□ 0.65
SNX3-204ENST00000426155 NME9Q86XW9 330 aa19.11■□□□□ 0.65
SNX3-204ENST00000426155 EP400Q96L91 3159 aa19.1■□□□□ 0.65
SNX3-204ENST00000426155 NINLQ9Y2I6 1382 aa19.09■□□□□ 0.65
SNX3-204ENST00000426155 STRN4Q9NRL3 753 aa19.09■□□□□ 0.65
SNX3-204ENST00000426155 THSD7AQ9UPZ6 1657 aa19.08■□□□□ 0.65
SNX3-204ENST00000426155 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
SNX3-204ENST00000426155 KIF20BQ96Q89 1820 aa19.08■□□□□ 0.64
SNX3-204ENST00000426155 HSPA5P11021 654 aaKnown RBP19.07■□□□□ 0.64
SNX3-204ENST00000426155 COL5A2P05997 1499 aaPredicted RBP19.07■□□□□ 0.64
SNX3-204ENST00000426155 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
SNX3-204ENST00000426155 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
SNX3-204ENST00000426155 SPATA31A5Q5VU36 1347 aa19.06■□□□□ 0.64
SNX3-204ENST00000426155 SPATA31A7Q8IWB4 1347 aa19.06■□□□□ 0.64
SNX3-204ENST00000426155 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
SNX3-204ENST00000426155 UPF1Q92900 1129 aaKnown RBP eCLIP19.06■□□□□ 0.64
SNX3-204ENST00000426155 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
SNX3-204ENST00000426155 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
SNX3-204ENST00000426155 FAM98CQ17RN3 349 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms