RNA–Protein interactions for RNA: ENST00000425992.2

VDAC1-204, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-204ENST00000425992 TRPC5Q9UL62 973 aaPredicted RBP33.91■■■■□ 3.02
VDAC1-204ENST00000425992 PLEKHG3A1L390 1219 aa33.9■■■■□ 3.02
VDAC1-204ENST00000425992 PAK3O75914 559 aaPredicted RBP33.9■■■■□ 3.02
VDAC1-204ENST00000425992 SLIT2O94813 1529 aa33.89■■■■□ 3.02
VDAC1-204ENST00000425992 RGS12O14924 1447 aa33.89■■■■□ 3.02
VDAC1-204ENST00000425992 PPIP5K1Q6PFW1 1433 aa33.89■■■■□ 3.02
VDAC1-204ENST00000425992 NWD2Q9ULI1 1742 aa33.86■■■■□ 3.01
VDAC1-204ENST00000425992 EVC2Q86UK5 1308 aa33.84■■■■□ 3.01
VDAC1-204ENST00000425992 CARD11Q9BXL7 1154 aa33.84■■■■□ 3.01
VDAC1-204ENST00000425992 PHRF1Q9P1Y6 1649 aaKnown RBP33.82■■■■□ 3.01
VDAC1-204ENST00000425992 UNC5CLQ8IV45 518 aa33.81■■■■□ 3
VDAC1-204ENST00000425992 PCGF6Q9BYE7 350 aa33.81■■■■□ 3
VDAC1-204ENST00000425992 COL14A1Q05707 1796 aaKnown RBP33.78■■■■□ 3
VDAC1-204ENST00000425992 NRAPQ86VF7 1730 aa33.77■■■■□ 3
VDAC1-204ENST00000425992 FAM83GA6ND36 823 aa33.77■■■■□ 3
VDAC1-204ENST00000425992 CABP1Q9NZU7 370 aa33.77■■■■□ 3
VDAC1-204ENST00000425992 GLI3P10071 1580 aa33.77■■■■□ 3
VDAC1-204ENST00000425992 SBNO2Q9Y2G9 1366 aa33.75■■■□□ 2.99
VDAC1-204ENST00000425992 NUTM2GQ5VZR2 741 aa33.75■■■□□ 2.99
VDAC1-204ENST00000425992 GJD4Q96KN9 370 aaPredicted RBP33.75■■■□□ 2.99
VDAC1-204ENST00000425992 AKAP12Q02952 1782 aa33.73■■■□□ 2.99
VDAC1-204ENST00000425992 USP6P35125 1406 aa33.7■■■□□ 2.99
VDAC1-204ENST00000425992 UPF1Q92900 1129 aaKnown RBP eCLIP33.7■■■□□ 2.99
VDAC1-204ENST00000425992 ABTB2Q8N961 1025 aa33.69■■■□□ 2.98
VDAC1-204ENST00000425992 NRKQ7Z2Y5 1582 aa33.68■■■□□ 2.98
VDAC1-204ENST00000425992 VPS72Q15906 364 aa33.67■■■□□ 2.98
VDAC1-204ENST00000425992 BRD4O60885 1362 aaPredicted RBP33.67■■■□□ 2.98
VDAC1-204ENST00000425992 ATAD2Q6PL18 1390 aa33.67■■■□□ 2.98
VDAC1-204ENST00000425992 BTG4Q9NY30 223 aa33.66■■■□□ 2.98
VDAC1-204ENST00000425992 KIAA0232Q92628 1395 aa33.64■■■□□ 2.98
VDAC1-204ENST00000425992 CLSPNQ9HAW4 1339 aa33.64■■■□□ 2.98
VDAC1-204ENST00000425992 PRDM11Q9NQV5 511 aa33.64■■■□□ 2.98
VDAC1-204ENST00000425992 BRWD3Q6RI45 1802 aa33.64■■■□□ 2.98
VDAC1-204ENST00000425992 PIK3C2AO00443 1686 aa33.64■■■□□ 2.98
VDAC1-204ENST00000425992 SSH2Q76I76 1423 aa33.63■■■□□ 2.97
VDAC1-204ENST00000425992 USP19O94966 1318 aa33.63■■■□□ 2.97
VDAC1-204ENST00000425992 CCDC9Q9Y3X0 531 aaKnown RBP33.62■■■□□ 2.97
VDAC1-204ENST00000425992 ZC3H6P61129 1189 aaKnown RBP33.61■■■□□ 2.97
VDAC1-204ENST00000425992 MON2Q7Z3U7 1717 aa33.6■■■□□ 2.97
VDAC1-204ENST00000425992 CHRNA2Q15822 529 aa33.59■■■□□ 2.97
VDAC1-204ENST00000425992 NLRP13Q86W25 1043 aa33.59■■■□□ 2.97
VDAC1-204ENST00000425992 CPSF1Q10570 1443 aaKnown RBP33.59■■■□□ 2.97
VDAC1-204ENST00000425992 EP400Q96L91 3159 aa33.57■■■□□ 2.96
VDAC1-204ENST00000425992 ST20-MTHFSA0A0A6YYL1 179 aa33.56■■■□□ 2.96
VDAC1-204ENST00000425992 ZNF692Q9BU19 519 aaPredicted RBP33.56■■■□□ 2.96
VDAC1-204ENST00000425992 TESK2Q96S53 571 aa33.55■■■□□ 2.96
VDAC1-204ENST00000425992 SLIT3O75094 1523 aa33.54■■■□□ 2.96
VDAC1-204ENST00000425992 TIMELESSQ9UNS1 1208 aa33.54■■■□□ 2.96
VDAC1-204ENST00000425992 LMO7Q8WWI1 1683 aa33.54■■■□□ 2.96
VDAC1-204ENST00000425992 TTC21BQ7Z4L5 1316 aa33.53■■■□□ 2.96
VDAC1-204ENST00000425992 NLRP6P59044 892 aa33.53■■■□□ 2.96
VDAC1-204ENST00000425992 CD163L1Q9NR16 1453 aa33.52■■■□□ 2.96
VDAC1-204ENST00000425992 CPDO75976 1380 aa33.52■■■□□ 2.96
VDAC1-204ENST00000425992 KTN1Q86UP2 1357 aaKnown RBP33.52■■■□□ 2.96
VDAC1-204ENST00000425992 GCP02774 474 aa33.52■■■□□ 2.96
VDAC1-204ENST00000425992 ONECUT3O60422 494 aaPredicted RBP33.5■■■□□ 2.95
VDAC1-204ENST00000425992 SEPT12Q8IYM1 358 aa33.5■■■□□ 2.95
VDAC1-204ENST00000425992 USP47Q96K76 1375 aa33.49■■■□□ 2.95
VDAC1-204ENST00000425992 CAMTA1Q9Y6Y1 1673 aa33.49■■■□□ 2.95
VDAC1-204ENST00000425992 SPATA31A5Q5VU36 1347 aa33.49■■■□□ 2.95
VDAC1-204ENST00000425992 SPATA31A7Q8IWB4 1347 aa33.49■■■□□ 2.95
VDAC1-204ENST00000425992 TMC1Q8TDI8 760 aa33.48■■■□□ 2.95
VDAC1-204ENST00000425992 TTC21AQ8NDW8 1320 aa33.47■■■□□ 2.95
VDAC1-204ENST00000425992 FAM98CQ17RN3 349 aaKnown RBP33.46■■■□□ 2.95
VDAC1-204ENST00000425992 CCER1Q8TC90 406 aaPredicted RBP33.46■■■□□ 2.95
VDAC1-204ENST00000425992 PUS7Q96PZ0 661 aaKnown RBP33.46■■■□□ 2.95
VDAC1-204ENST00000425992 SLC12A5Q9H2X9 1139 aa33.46■■■□□ 2.95
VDAC1-204ENST00000425992 STRN4Q9NRL3 753 aa33.45■■■□□ 2.95
VDAC1-204ENST00000425992 THSD7AQ9UPZ6 1657 aa33.43■■■□□ 2.94
VDAC1-204ENST00000425992 USP54Q70EL1 1684 aa33.42■■■□□ 2.94
VDAC1-204ENST00000425992 COL18A1P39060 1754 aa33.42■■■□□ 2.94
VDAC1-204ENST00000425992 SPATA31A1Q5TZJ5 1347 aa33.4■■■□□ 2.94
VDAC1-204ENST00000425992 A0A0G2JS52 829 aa33.4■■■□□ 2.94
VDAC1-204ENST00000425992 MYT1Q01538 1121 aa33.4■■■□□ 2.94
VDAC1-204ENST00000425992 HDGFL2Q7Z4V5 671 aaPredicted RBP33.4■■■□□ 2.94
VDAC1-204ENST00000425992 A0A1W2PP64 1363 aa33.39■■■□□ 2.94
VDAC1-204ENST00000425992 ZBTB7CA1YPR0 619 aa33.39■■■□□ 2.94
VDAC1-204ENST00000425992 SLC24A1O60721 1099 aa33.39■■■□□ 2.94
VDAC1-204ENST00000425992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.39■■■□□ 2.94
VDAC1-204ENST00000425992 EVA1CP58658 441 aa33.38■■■□□ 2.93
VDAC1-204ENST00000425992 RGPD5Q99666 1765 aa33.38■■■□□ 2.93
VDAC1-204ENST00000425992 COL5A2P05997 1499 aaPredicted RBP33.37■■■□□ 2.93
VDAC1-204ENST00000425992 KRT27Q7Z3Y8 459 aa33.37■■■□□ 2.93
VDAC1-204ENST00000425992 ZRANB1Q9UGI0 708 aa33.37■■■□□ 2.93
VDAC1-204ENST00000425992 NFAT5O94916 1531 aa33.37■■■□□ 2.93
VDAC1-204ENST00000425992 EDC4Q6P2E9 1401 aaKnown RBP33.36■■■□□ 2.93
VDAC1-204ENST00000425992 TERF2IPQ9NYB0 399 aa33.36■■■□□ 2.93
VDAC1-204ENST00000425992 AATKQ6ZMQ8 1374 aa33.35■■■□□ 2.93
VDAC1-204ENST00000425992 LARP1Q6PKG0 1096 aaKnown RBP33.35■■■□□ 2.93
VDAC1-204ENST00000425992 NINLQ9Y2I6 1382 aa33.34■■■□□ 2.93
VDAC1-204ENST00000425992 NME9Q86XW9 330 aa33.34■■■□□ 2.93
VDAC1-204ENST00000425992 SOX12O15370 315 aa33.33■■■□□ 2.93
VDAC1-204ENST00000425992 TMF1P82094 1093 aa33.33■■■□□ 2.93
VDAC1-204ENST00000425992 KCNH5Q8NCM2 988 aa33.33■■■□□ 2.93
VDAC1-204ENST00000425992 USP31Q70CQ4 1352 aa33.33■■■□□ 2.93
VDAC1-204ENST00000425992 USP35Q9P2H5 1018 aa33.32■■■□□ 2.92
VDAC1-204ENST00000425992 ARHGEF25Q86VW2 580 aa33.3■■■□□ 2.92
VDAC1-204ENST00000425992 LTN1O94822 1766 aa33.29■■■□□ 2.92
VDAC1-204ENST00000425992 CCDC125Q86Z20 511 aa33.28■■■□□ 2.92
VDAC1-204ENST00000425992 AXIN2Q9Y2T1 843 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms