RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
TPM3P4-201ENST00000425942 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
TPM3P4-201ENST00000425942 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
TPM3P4-201ENST00000425942 TOM1O60784 492 aa12.8□□□□□ -0.36
TPM3P4-201ENST00000425942 TULP4Q9NRJ4 1543 aa12.79□□□□□ -0.36
TPM3P4-201ENST00000425942 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
TPM3P4-201ENST00000425942 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
TPM3P4-201ENST00000425942 C19orf44Q9H6X5 657 aa12.79□□□□□ -0.36
TPM3P4-201ENST00000425942 SBNO2Q9Y2G9 1366 aa12.79□□□□□ -0.36
TPM3P4-201ENST00000425942 MST1RQ04912 1400 aa12.79□□□□□ -0.36
TPM3P4-201ENST00000425942 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
TPM3P4-201ENST00000425942 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
TPM3P4-201ENST00000425942 ANKARQ7Z5J8 1434 aa12.78□□□□□ -0.36
TPM3P4-201ENST00000425942 USP32Q8NFA0 1604 aa12.77□□□□□ -0.36
TPM3P4-201ENST00000425942 RGPD8O14715 1765 aaPredicted RBP12.77□□□□□ -0.36
TPM3P4-201ENST00000425942 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
TPM3P4-201ENST00000425942 C14orf37Q86TY3 774 aa12.77□□□□□ -0.37
TPM3P4-201ENST00000425942 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
TPM3P4-201ENST00000425942 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
TPM3P4-201ENST00000425942 UBAP1LF5GYI3 381 aa12.76□□□□□ -0.37
TPM3P4-201ENST00000425942 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
TPM3P4-201ENST00000425942 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
TPM3P4-201ENST00000425942 ATF3P18847 181 aa12.75□□□□□ -0.37
TPM3P4-201ENST00000425942 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
TPM3P4-201ENST00000425942 SHPRHQ149N8 1683 aa12.74□□□□□ -0.37
TPM3P4-201ENST00000425942 C1orf167Q5SNV9 1468 aa12.74□□□□□ -0.37
TPM3P4-201ENST00000425942 PLEKHH1Q9ULM0 1364 aa12.74□□□□□ -0.37
TPM3P4-201ENST00000425942 C7P10643 843 aa12.74□□□□□ -0.37
TPM3P4-201ENST00000425942 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
TPM3P4-201ENST00000425942 STK26Q9P289 416 aa12.73□□□□□ -0.37
TPM3P4-201ENST00000425942 ATP7BP35670 1465 aa12.72□□□□□ -0.37
TPM3P4-201ENST00000425942 CENPJQ9HC77 1338 aaPredicted RBP12.72□□□□□ -0.37
TPM3P4-201ENST00000425942 CHRM1P11229 460 aaPredicted RBP12.72□□□□□ -0.37
TPM3P4-201ENST00000425942 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
TPM3P4-201ENST00000425942 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
TPM3P4-201ENST00000425942 POGKQ9P215 609 aa12.72□□□□□ -0.37
TPM3P4-201ENST00000425942 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
TPM3P4-201ENST00000425942 NBPF1Q3BBV0 1214 aa12.71□□□□□ -0.37
TPM3P4-201ENST00000425942 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
TPM3P4-201ENST00000425942 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
TPM3P4-201ENST00000425942 CARD11Q9BXL7 1154 aa12.7□□□□□ -0.38
TPM3P4-201ENST00000425942 AKAP12Q02952 1782 aa12.7□□□□□ -0.38
TPM3P4-201ENST00000425942 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
TPM3P4-201ENST00000425942 COL22A1Q8NFW1 1626 aaPredicted RBP12.69□□□□□ -0.38
TPM3P4-201ENST00000425942 USP47Q96K76 1375 aa12.69□□□□□ -0.38
TPM3P4-201ENST00000425942 RBM33Q96EV2 1170 aaKnown RBP12.68□□□□□ -0.38
TPM3P4-201ENST00000425942 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
TPM3P4-201ENST00000425942 MON2Q7Z3U7 1717 aa12.68□□□□□ -0.38
TPM3P4-201ENST00000425942 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
TPM3P4-201ENST00000425942 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
TPM3P4-201ENST00000425942 NRKQ7Z2Y5 1582 aa12.66□□□□□ -0.38
TPM3P4-201ENST00000425942 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
TPM3P4-201ENST00000425942 ABCA3Q99758 1704 aa12.65□□□□□ -0.38
TPM3P4-201ENST00000425942 MYOM1P52179 1685 aa12.65□□□□□ -0.38
TPM3P4-201ENST00000425942 ALS2Q96Q42 1657 aa12.65□□□□□ -0.38
TPM3P4-201ENST00000425942 WASLO00401 505 aaPredicted RBP12.65□□□□□ -0.38
TPM3P4-201ENST00000425942 ATAD2Q6PL18 1390 aa12.65□□□□□ -0.38
TPM3P4-201ENST00000425942 PXDNQ92626 1479 aa12.65□□□□□ -0.38
TPM3P4-201ENST00000425942 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
TPM3P4-201ENST00000425942 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
TPM3P4-201ENST00000425942 BRINP3Q76B58 766 aa12.64□□□□□ -0.39
TPM3P4-201ENST00000425942 MARF1Q9Y4F3 1742 aaKnown RBP12.64□□□□□ -0.39
TPM3P4-201ENST00000425942 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
TPM3P4-201ENST00000425942 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
TPM3P4-201ENST00000425942 NPHP3Q7Z494 1330 aa12.63□□□□□ -0.39
TPM3P4-201ENST00000425942 EVC2Q86UK5 1308 aa12.63□□□□□ -0.39
TPM3P4-201ENST00000425942 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
TPM3P4-201ENST00000425942 USP54Q70EL1 1684 aa12.63□□□□□ -0.39
TPM3P4-201ENST00000425942 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
TPM3P4-201ENST00000425942 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
TPM3P4-201ENST00000425942 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
TPM3P4-201ENST00000425942 BRD4O60885 1362 aaPredicted RBP12.61□□□□□ -0.39
TPM3P4-201ENST00000425942 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
TPM3P4-201ENST00000425942 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
TPM3P4-201ENST00000425942 POLR3AO14802 1390 aaPredicted RBP12.6□□□□□ -0.39
TPM3P4-201ENST00000425942 JCADQ9P266 1359 aa12.6□□□□□ -0.39
TPM3P4-201ENST00000425942 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
TPM3P4-201ENST00000425942 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
TPM3P4-201ENST00000425942 PPIP5K1Q6PFW1 1433 aa12.6□□□□□ -0.39
TPM3P4-201ENST00000425942 PHRF1Q9P1Y6 1649 aaKnown RBP12.59□□□□□ -0.39
TPM3P4-201ENST00000425942 IER5LQ5T953 404 aa12.59□□□□□ -0.39
TPM3P4-201ENST00000425942 TNS3Q68CZ2 1445 aa12.59□□□□□ -0.39
TPM3P4-201ENST00000425942 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
TPM3P4-201ENST00000425942 SBNO1A3KN83 1393 aa12.58□□□□□ -0.4
TPM3P4-201ENST00000425942 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
TPM3P4-201ENST00000425942 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
TPM3P4-201ENST00000425942 PRR36Q9H6K5 1346 aa12.58□□□□□ -0.4
TPM3P4-201ENST00000425942 SEC24BO95487 1268 aa12.57□□□□□ -0.4
TPM3P4-201ENST00000425942 HSPA1LP34931 641 aa12.57□□□□□ -0.4
TPM3P4-201ENST00000425942 PSEN1P49768 467 aa12.57□□□□□ -0.4
TPM3P4-201ENST00000425942 SRPK2P78362 688 aaKnown RBP12.57□□□□□ -0.4
TPM3P4-201ENST00000425942 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
TPM3P4-201ENST00000425942 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
TPM3P4-201ENST00000425942 KIF20BQ96Q89 1820 aa12.57□□□□□ -0.4
TPM3P4-201ENST00000425942 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
TPM3P4-201ENST00000425942 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
TPM3P4-201ENST00000425942 TESK2Q96S53 571 aa12.56□□□□□ -0.4
TPM3P4-201ENST00000425942 PIK3C2AO00443 1686 aa12.56□□□□□ -0.4
TPM3P4-201ENST00000425942 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
TPM3P4-201ENST00000425942 ST20-MTHFSA0A0A6YYL1 179 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms