RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 SSH2Q76I76 1423 aa21.39■■□□□ 1.01
SCRN1-205ENST00000425819 PSME1Q06323 249 aa21.39■■□□□ 1.01
SCRN1-205ENST00000425819 CCDC184Q52MB2 194 aa21.39■■□□□ 1.01
SCRN1-205ENST00000425819 SLAIN2Q9P270 581 aa21.39■■□□□ 1.01
SCRN1-205ENST00000425819 NRKQ7Z2Y5 1582 aa21.38■■□□□ 1.01
SCRN1-205ENST00000425819 TNNT2P45379 298 aaPredicted RBP21.38■■□□□ 1.01
SCRN1-205ENST00000425819 ZRANB1Q9UGI0 708 aa21.38■■□□□ 1.01
SCRN1-205ENST00000425819 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
SCRN1-205ENST00000425819 XPCQ01831 940 aaPredicted RBP21.36■■□□□ 1.01
SCRN1-205ENST00000425819 MRS2Q9HD23 443 aa21.36■■□□□ 1.01
SCRN1-205ENST00000425819 TTC21AQ8NDW8 1320 aa21.36■■□□□ 1.01
SCRN1-205ENST00000425819 KIF1AQ12756 1690 aa21.36■■□□□ 1.01
SCRN1-205ENST00000425819 KIF20BQ96Q89 1820 aa21.36■■□□□ 1.01
SCRN1-205ENST00000425819 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
SCRN1-205ENST00000425819 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
SCRN1-205ENST00000425819 BRINP3Q76B58 766 aa21.34■■□□□ 1.01
SCRN1-205ENST00000425819 DDX17Q92841 729 aaKnown RBP21.33■■□□□ 1.01
SCRN1-205ENST00000425819 COG3Q96JB2 828 aa21.33■■□□□ 1.01
SCRN1-205ENST00000425819 KRT28Q7Z3Y7 464 aa21.32■■□□□ 1
SCRN1-205ENST00000425819 BRD4O60885 1362 aaPredicted RBP21.32■■□□□ 1
SCRN1-205ENST00000425819 ANKRD26Q9UPS8 1709 aa21.31■■□□□ 1
SCRN1-205ENST00000425819 NUTM2GQ5VZR2 741 aa21.3■■□□□ 1
SCRN1-205ENST00000425819 NPHP3Q7Z494 1330 aa21.3■■□□□ 1
SCRN1-205ENST00000425819 ABTB2Q8N961 1025 aa21.29■■□□□ 1
SCRN1-205ENST00000425819 OVOS2A0A0J9YW53 1432 aa21.28■■□□□ 1
SCRN1-205ENST00000425819 OVOS2Q6IE36 1432 aa21.28■■□□□ 1
SCRN1-205ENST00000425819 NLRP6P59044 892 aa21.27■■□□□ 1
SCRN1-205ENST00000425819 PIK3C2AO00443 1686 aa21.27■■□□□ 1
SCRN1-205ENST00000425819 FBLN1P23142 703 aa21.27■□□□□ 0.99
SCRN1-205ENST00000425819 USP31Q70CQ4 1352 aa21.27■□□□□ 0.99
SCRN1-205ENST00000425819 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
SCRN1-205ENST00000425819 MTHFSP49914 203 aa21.25■□□□□ 0.99
SCRN1-205ENST00000425819 LMOD2Q6P5Q4 547 aa21.25■□□□□ 0.99
SCRN1-205ENST00000425819 PXDNQ92626 1479 aa21.24■□□□□ 0.99
SCRN1-205ENST00000425819 TRPM3Q9HCF6 1732 aaPredicted RBP21.24■□□□□ 0.99
SCRN1-205ENST00000425819 SOX12O15370 315 aa21.23■□□□□ 0.99
SCRN1-205ENST00000425819 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
SCRN1-205ENST00000425819 SBNO1A3KN83 1393 aa21.22■□□□□ 0.99
SCRN1-205ENST00000425819 YTHDC1Q96MU7 727 aaKnown RBP21.22■□□□□ 0.99
SCRN1-205ENST00000425819 TOM1O60784 492 aa21.21■□□□□ 0.99
SCRN1-205ENST00000425819 PLEKHG5O94827 1062 aa21.21■□□□□ 0.99
SCRN1-205ENST00000425819 AATKQ6ZMQ8 1374 aa21.21■□□□□ 0.99
SCRN1-205ENST00000425819 RRS1Q15050 365 aaKnown RBP21.2■□□□□ 0.98
SCRN1-205ENST00000425819 CERKQ8TCT0 537 aa21.2■□□□□ 0.98
SCRN1-205ENST00000425819 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
SCRN1-205ENST00000425819 POLKQ9UBT6 870 aa21.2■□□□□ 0.98
SCRN1-205ENST00000425819 PPM1GO15355 546 aaPredicted RBP21.19■□□□□ 0.98
SCRN1-205ENST00000425819 SOS2Q07890 1332 aaPredicted RBP21.19■□□□□ 0.98
SCRN1-205ENST00000425819 TNS3Q68CZ2 1445 aa21.19■□□□□ 0.98
SCRN1-205ENST00000425819 UBAP1LF5GYI3 381 aa21.19■□□□□ 0.98
SCRN1-205ENST00000425819 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
SCRN1-205ENST00000425819 ROBO1Q9Y6N7 1651 aa21.19■□□□□ 0.98
SCRN1-205ENST00000425819 SPATA31A3Q5VYP0 1347 aa21.18■□□□□ 0.98
SCRN1-205ENST00000425819 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
SCRN1-205ENST00000425819 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
SCRN1-205ENST00000425819 MARF1Q9Y4F3 1742 aaKnown RBP21.17■□□□□ 0.98
SCRN1-205ENST00000425819 IQSEC2Q5JU85 1478 aa21.17■□□□□ 0.98
SCRN1-205ENST00000425819 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
SCRN1-205ENST00000425819 ALS2Q96Q42 1657 aa21.16■□□□□ 0.98
SCRN1-205ENST00000425819 NHSL1Q5SYE7 1610 aa21.16■□□□□ 0.98
SCRN1-205ENST00000425819 SMG6Q86US8 1419 aaKnown RBP21.14■□□□□ 0.97
SCRN1-205ENST00000425819 USP19O94966 1318 aa21.13■□□□□ 0.97
SCRN1-205ENST00000425819 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
SCRN1-205ENST00000425819 WDR43Q15061 677 aaKnown RBP eCLIP21.13■□□□□ 0.97
SCRN1-205ENST00000425819 MAP3K19Q56UN5 1328 aa21.13■□□□□ 0.97
SCRN1-205ENST00000425819 KCNH5Q8NCM2 988 aa21.12■□□□□ 0.97
SCRN1-205ENST00000425819 MAP2P11137 1827 aaKnown RBP21.12■□□□□ 0.97
SCRN1-205ENST00000425819 GCP02774 474 aa21.11■□□□□ 0.97
SCRN1-205ENST00000425819 PNPLA6Q8IY17 1366 aa21.11■□□□□ 0.97
SCRN1-205ENST00000425819 CDK12Q9NYV4 1490 aaPredicted RBP21.1■□□□□ 0.97
SCRN1-205ENST00000425819 SLIT3O75094 1523 aa21.1■□□□□ 0.97
SCRN1-205ENST00000425819 AHDC1Q5TGY3 1603 aaPredicted RBP21.1■□□□□ 0.97
SCRN1-205ENST00000425819 COL3A1P02461 1466 aaPredicted RBP21.1■□□□□ 0.97
SCRN1-205ENST00000425819 CABLES1Q8TDN4 633 aa21.1■□□□□ 0.97
SCRN1-205ENST00000425819 MED1Q15648 1581 aaPredicted RBP21.1■□□□□ 0.97
SCRN1-205ENST00000425819 NFAT5O94916 1531 aa21.09■□□□□ 0.97
SCRN1-205ENST00000425819 AMPHP49418 695 aa21.09■□□□□ 0.97
SCRN1-205ENST00000425819 ADAMTS8Q9UP79 889 aa21.09■□□□□ 0.97
SCRN1-205ENST00000425819 INSRP06213 1382 aa21.09■□□□□ 0.97
SCRN1-205ENST00000425819 ZBTB7CA1YPR0 619 aa21.08■□□□□ 0.97
SCRN1-205ENST00000425819 DIAPH1O60610 1272 aaKnown RBP21.08■□□□□ 0.97
SCRN1-205ENST00000425819 PEAK1Q9H792 1746 aa21.07■□□□□ 0.96
SCRN1-205ENST00000425819 LRRC59Q96AG4 307 aaKnown RBP21.06■□□□□ 0.96
SCRN1-205ENST00000425819 FLT4P35916 1363 aa21.06■□□□□ 0.96
SCRN1-205ENST00000425819 SHPRHQ149N8 1683 aa21.06■□□□□ 0.96
SCRN1-205ENST00000425819 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
SCRN1-205ENST00000425819 NUDCQ9Y266 331 aa21.06■□□□□ 0.96
SCRN1-205ENST00000425819 U2SURPO15042 1029 aaKnown RBP21.05■□□□□ 0.96
SCRN1-205ENST00000425819 HOXC9P31274 260 aa21.04■□□□□ 0.96
SCRN1-205ENST00000425819 ZC3H6P61129 1189 aaKnown RBP21.04■□□□□ 0.96
SCRN1-205ENST00000425819 PHLPP1O60346 1717 aa21.03■□□□□ 0.96
SCRN1-205ENST00000425819 U2AF1L5P0DN76 240 aaPredicted RBP21.03■□□□□ 0.96
SCRN1-205ENST00000425819 HNRNPUQ00839 825 aaKnown RBP eCLIP21.03■□□□□ 0.96
SCRN1-205ENST00000425819 U2AF1Q01081 240 aaKnown RBP eCLIP21.03■□□□□ 0.96
SCRN1-205ENST00000425819 ARHGEF25Q86VW2 580 aa21.03■□□□□ 0.96
SCRN1-205ENST00000425819 PHRF1Q9P1Y6 1649 aaKnown RBP21.02■□□□□ 0.96
SCRN1-205ENST00000425819 IL13P35225 146 aa21.02■□□□□ 0.96
SCRN1-205ENST00000425819 RTL1A6NKG5 1358 aa21.02■□□□□ 0.96
SCRN1-205ENST00000425819 KIF24Q5T7B8 1368 aa21.02■□□□□ 0.96
SCRN1-205ENST00000425819 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms