RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
PRDM1-204ENST00000424894 CARD11Q9BXL7 1154 aa10.18□□□□□ -0.78
PRDM1-204ENST00000424894 NWD2Q9ULI1 1742 aa10.18□□□□□ -0.78
PRDM1-204ENST00000424894 COL14A1Q05707 1796 aaKnown RBP10.16□□□□□ -0.78
PRDM1-204ENST00000424894 SBNO1A3KN83 1393 aa10.16□□□□□ -0.78
PRDM1-204ENST00000424894 EIF3AQ14152 1382 aaKnown RBP10.16□□□□□ -0.78
PRDM1-204ENST00000424894 QTRT2Q9H974 415 aaKnown RBP10.16□□□□□ -0.78
PRDM1-204ENST00000424894 USP21Q9UK80 565 aa10.16□□□□□ -0.78
PRDM1-204ENST00000424894 MYOM1P52179 1685 aa10.15□□□□□ -0.78
PRDM1-204ENST00000424894 POLR3AO14802 1390 aaPredicted RBP10.15□□□□□ -0.78
PRDM1-204ENST00000424894 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
PRDM1-204ENST00000424894 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
PRDM1-204ENST00000424894 SLIT2O94813 1529 aa10.15□□□□□ -0.78
PRDM1-204ENST00000424894 ATRNO75882 1429 aa10.15□□□□□ -0.79
PRDM1-204ENST00000424894 ZNF772Q68DY9 489 aaPredicted RBP10.14□□□□□ -0.79
PRDM1-204ENST00000424894 CCER1Q8TC90 406 aaPredicted RBP10.14□□□□□ -0.79
PRDM1-204ENST00000424894 CD163L1Q9NR16 1453 aa10.14□□□□□ -0.79
PRDM1-204ENST00000424894 LTN1O94822 1766 aa10.14□□□□□ -0.79
PRDM1-204ENST00000424894 CHRNA2Q15822 529 aa10.13□□□□□ -0.79
PRDM1-204ENST00000424894 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
PRDM1-204ENST00000424894 CCDC61Q9Y6R9 512 aa10.13□□□□□ -0.79
PRDM1-204ENST00000424894 ARHGEF10O15013 1369 aa10.13□□□□□ -0.79
PRDM1-204ENST00000424894 LMO7Q8WWI1 1683 aa10.12□□□□□ -0.79
PRDM1-204ENST00000424894 ST20-MTHFSA0A0A6YYL1 179 aa10.12□□□□□ -0.79
PRDM1-204ENST00000424894 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
PRDM1-204ENST00000424894 FAM83GA6ND36 823 aa10.12□□□□□ -0.79
PRDM1-204ENST00000424894 RXRBP28702 533 aa10.12□□□□□ -0.79
PRDM1-204ENST00000424894 FNBP4Q8N3X1 1017 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-204ENST00000424894 USP6P35125 1406 aa10.12□□□□□ -0.79
PRDM1-204ENST00000424894 EVC2Q86UK5 1308 aa10.11□□□□□ -0.79
PRDM1-204ENST00000424894 ZBTB7CA1YPR0 619 aa10.11□□□□□ -0.79
PRDM1-204ENST00000424894 ZC3H6P61129 1189 aaKnown RBP10.11□□□□□ -0.79
PRDM1-204ENST00000424894 KIAA0232Q92628 1395 aa10.11□□□□□ -0.79
PRDM1-204ENST00000424894 USP47Q96K76 1375 aa10.11□□□□□ -0.79
PRDM1-204ENST00000424894 COL18A1P39060 1754 aa10.11□□□□□ -0.79
PRDM1-204ENST00000424894 SSH2Q76I76 1423 aa10.1□□□□□ -0.79
PRDM1-204ENST00000424894 SOX12O15370 315 aa10.1□□□□□ -0.79
PRDM1-204ENST00000424894 ABTB2Q8N961 1025 aa10.1□□□□□ -0.79
PRDM1-204ENST00000424894 TESK2Q96S53 571 aa10.1□□□□□ -0.79
PRDM1-204ENST00000424894 BTG4Q9NY30 223 aa10.1□□□□□ -0.79
PRDM1-204ENST00000424894 WNK3Q9BYP7 1800 aa10.1□□□□□ -0.79
PRDM1-204ENST00000424894 CAMTA1Q9Y6Y1 1673 aa10.09□□□□□ -0.79
PRDM1-204ENST00000424894 SLIT3O75094 1523 aa10.09□□□□□ -0.79
PRDM1-204ENST00000424894 RBM6P78332 1123 aaKnown RBP10.09□□□□□ -0.79
PRDM1-204ENST00000424894 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
PRDM1-204ENST00000424894 KIF20BQ96Q89 1820 aa10.09□□□□□ -0.79
PRDM1-204ENST00000424894 RGPD2P0DJD1 1756 aa10.09□□□□□ -0.79
PRDM1-204ENST00000424894 UNC5CLQ8IV45 518 aa10.08□□□□□ -0.8
PRDM1-204ENST00000424894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRDM1-204ENST00000424894 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
PRDM1-204ENST00000424894 TRPC5Q9UL62 973 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-204ENST00000424894 CCDC9Q9Y3X0 531 aaKnown RBP10.08□□□□□ -0.8
PRDM1-204ENST00000424894 CDK12Q9NYV4 1490 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-204ENST00000424894 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
PRDM1-204ENST00000424894 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
PRDM1-204ENST00000424894 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 A0A1W2PP64 1363 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
PRDM1-204ENST00000424894 SBNO2Q9Y2G9 1366 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 STRN4Q9NRL3 753 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 NFAT5O94916 1531 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 USP19O94966 1318 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 TTC21BQ7Z4L5 1316 aa10.07□□□□□ -0.8
PRDM1-204ENST00000424894 NME9Q86XW9 330 aa10.06□□□□□ -0.8
PRDM1-204ENST00000424894 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
PRDM1-204ENST00000424894 PRDM11Q9NQV5 511 aa10.06□□□□□ -0.8
PRDM1-204ENST00000424894 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
PRDM1-204ENST00000424894 NLRP6P59044 892 aa10.05□□□□□ -0.8
PRDM1-204ENST00000424894 UPF1Q92900 1129 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRDM1-204ENST00000424894 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
PRDM1-204ENST00000424894 FBLN1P23142 703 aa10.04□□□□□ -0.8
PRDM1-204ENST00000424894 FAM98CQ17RN3 349 aaKnown RBP10.04□□□□□ -0.8
PRDM1-204ENST00000424894 A0A0G2JS52 829 aa10.03□□□□□ -0.8
PRDM1-204ENST00000424894 GCP02774 474 aa10.03□□□□□ -0.8
PRDM1-204ENST00000424894 MYT1Q01538 1121 aa10.03□□□□□ -0.8
PRDM1-204ENST00000424894 VPS72Q15906 364 aa10.03□□□□□ -0.8
PRDM1-204ENST00000424894 LARP1Q6PKG0 1096 aaKnown RBP10.03□□□□□ -0.8
PRDM1-204ENST00000424894 POLR3GLQ9BT43 218 aa10.03□□□□□ -0.8
PRDM1-204ENST00000424894 TNS1Q9HBL0 1735 aaKnown RBP10.03□□□□□ -0.8
PRDM1-204ENST00000424894 LRRC37A3O60309 1634 aa10.03□□□□□ -0.8
PRDM1-204ENST00000424894 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
PRDM1-204ENST00000424894 SEPT12Q8IYM1 358 aa10.02□□□□□ -0.81
PRDM1-204ENST00000424894 AXIN2Q9Y2T1 843 aa10.02□□□□□ -0.81
PRDM1-204ENST00000424894 CLSPNQ9HAW4 1339 aa10.02□□□□□ -0.81
PRDM1-204ENST00000424894 PEAK1Q9H792 1746 aa10.02□□□□□ -0.81
PRDM1-204ENST00000424894 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
PRDM1-204ENST00000424894 NLRP13Q86W25 1043 aa10.01□□□□□ -0.81
PRDM1-204ENST00000424894 PARP4Q9UKK3 1724 aaKnown RBP10.01□□□□□ -0.81
PRDM1-204ENST00000424894 SPATA31A5Q5VU36 1347 aa10.01□□□□□ -0.81
PRDM1-204ENST00000424894 SPATA31A7Q8IWB4 1347 aa10.01□□□□□ -0.81
PRDM1-204ENST00000424894 EDC4Q6P2E9 1401 aaKnown RBP10□□□□□ -0.81
PRDM1-204ENST00000424894 C11orf95C9JLR9 678 aaPredicted RBP10□□□□□ -0.81
PRDM1-204ENST00000424894 SBF2Q86WG5 1849 aa10□□□□□ -0.81
PRDM1-204ENST00000424894 CPDO75976 1380 aa10□□□□□ -0.81
PRDM1-204ENST00000424894 OVOS2A0A0J9YW53 1432 aa9.99□□□□□ -0.81
PRDM1-204ENST00000424894 OVOS2Q6IE36 1432 aa9.99□□□□□ -0.81
PRDM1-204ENST00000424894 ANKRD26Q9UPS8 1709 aa9.99□□□□□ -0.81
PRDM1-204ENST00000424894 SPATA31A1Q5TZJ5 1347 aa9.99□□□□□ -0.81
PRDM1-204ENST00000424894 RGPD1P0DJD0 1748 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms