RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 NEUROD1Q13562 356 aa16.44■□□□□ 0.22
NDUFA3-208ENST00000422029 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.44■□□□□ 0.22
NDUFA3-208ENST00000422029 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
NDUFA3-208ENST00000422029 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
NDUFA3-208ENST00000422029 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
NDUFA3-208ENST00000422029 CABP2Q9NPB3 220 aa16.42■□□□□ 0.22
NDUFA3-208ENST00000422029 PRDM11Q9NQV5 511 aa16.42■□□□□ 0.22
NDUFA3-208ENST00000422029 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
NDUFA3-208ENST00000422029 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
NDUFA3-208ENST00000422029 ACEP12821 1306 aa16.42■□□□□ 0.22
NDUFA3-208ENST00000422029 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
NDUFA3-208ENST00000422029 NBPF8Q3BBV2 869 aa16.41■□□□□ 0.22
NDUFA3-208ENST00000422029 ALS2Q96Q42 1657 aa16.4■□□□□ 0.22
NDUFA3-208ENST00000422029 L3MBTL2Q969R5 705 aa16.4■□□□□ 0.22
NDUFA3-208ENST00000422029 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
NDUFA3-208ENST00000422029 ATP7BP35670 1465 aa16.4■□□□□ 0.22
NDUFA3-208ENST00000422029 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
NDUFA3-208ENST00000422029 CCDC125Q86Z20 511 aa16.39■□□□□ 0.21
NDUFA3-208ENST00000422029 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
NDUFA3-208ENST00000422029 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
NDUFA3-208ENST00000422029 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
NDUFA3-208ENST00000422029 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
NDUFA3-208ENST00000422029 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
NDUFA3-208ENST00000422029 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
NDUFA3-208ENST00000422029 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
NDUFA3-208ENST00000422029 SPATA31A5Q5VU36 1347 aa16.36■□□□□ 0.21
NDUFA3-208ENST00000422029 SPATA31A7Q8IWB4 1347 aa16.36■□□□□ 0.21
NDUFA3-208ENST00000422029 NRAPQ86VF7 1730 aa16.36■□□□□ 0.21
NDUFA3-208ENST00000422029 COL14A1Q05707 1796 aaKnown RBP16.36■□□□□ 0.21
NDUFA3-208ENST00000422029 CENPJQ9HC77 1338 aaPredicted RBP16.35■□□□□ 0.21
NDUFA3-208ENST00000422029 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
NDUFA3-208ENST00000422029 EVA1CP58658 441 aa16.34■□□□□ 0.21
NDUFA3-208ENST00000422029 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
NDUFA3-208ENST00000422029 ITSN1Q15811 1721 aa16.33■□□□□ 0.21
NDUFA3-208ENST00000422029 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
NDUFA3-208ENST00000422029 PPIP5K1Q6PFW1 1433 aa16.33■□□□□ 0.2
NDUFA3-208ENST00000422029 CRYBG1Q9Y4K1 1723 aa16.33■□□□□ 0.2
NDUFA3-208ENST00000422029 POLR3AO14802 1390 aaPredicted RBP16.31■□□□□ 0.2
NDUFA3-208ENST00000422029 EN1Q05925 392 aaPredicted RBP16.31■□□□□ 0.2
NDUFA3-208ENST00000422029 LARP1Q6PKG0 1096 aaKnown RBP16.31■□□□□ 0.2
NDUFA3-208ENST00000422029 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
NDUFA3-208ENST00000422029 SPATA31A1Q5TZJ5 1347 aa16.3■□□□□ 0.2
NDUFA3-208ENST00000422029 TOPAZ1Q8N9V7 1692 aa16.3■□□□□ 0.2
NDUFA3-208ENST00000422029 PHRF1Q9P1Y6 1649 aaKnown RBP16.3■□□□□ 0.2
NDUFA3-208ENST00000422029 SOX12O15370 315 aa16.29■□□□□ 0.2
NDUFA3-208ENST00000422029 EP400Q96L91 3159 aa16.28■□□□□ 0.2
NDUFA3-208ENST00000422029 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
NDUFA3-208ENST00000422029 TRIM37O94972 964 aa16.28■□□□□ 0.2
NDUFA3-208ENST00000422029 GCP02774 474 aa16.28■□□□□ 0.2
NDUFA3-208ENST00000422029 BAG6P46379 1132 aa16.27■□□□□ 0.2
NDUFA3-208ENST00000422029 NLRP6P59044 892 aa16.27■□□□□ 0.2
NDUFA3-208ENST00000422029 NLRP13Q86W25 1043 aa16.27■□□□□ 0.2
NDUFA3-208ENST00000422029 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.19
NDUFA3-208ENST00000422029 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
NDUFA3-208ENST00000422029 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
NDUFA3-208ENST00000422029 SSH2Q76I76 1423 aa16.25■□□□□ 0.19
NDUFA3-208ENST00000422029 USP19O94966 1318 aa16.24■□□□□ 0.19
NDUFA3-208ENST00000422029 NRKQ7Z2Y5 1582 aa16.24■□□□□ 0.19
NDUFA3-208ENST00000422029 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
NDUFA3-208ENST00000422029 PDE3BQ13370 1112 aa16.23■□□□□ 0.19
NDUFA3-208ENST00000422029 THSD7AQ9UPZ6 1657 aa16.22■□□□□ 0.19
NDUFA3-208ENST00000422029 APBA3O96018 575 aa16.22■□□□□ 0.19
NDUFA3-208ENST00000422029 R3HDM1Q15032 1099 aaKnown RBP16.22■□□□□ 0.19
NDUFA3-208ENST00000422029 TCP11L2Q8N4U5 519 aa16.22■□□□□ 0.19
NDUFA3-208ENST00000422029 TRPM1Q7Z4N2 1603 aa16.22■□□□□ 0.19
NDUFA3-208ENST00000422029 USP6P35125 1406 aa16.21■□□□□ 0.19
NDUFA3-208ENST00000422029 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
NDUFA3-208ENST00000422029 AXIN2Q9Y2T1 843 aa16.2■□□□□ 0.18
NDUFA3-208ENST00000422029 BARGINQ6ZT62 677 aa16.19■□□□□ 0.18
NDUFA3-208ENST00000422029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.18
NDUFA3-208ENST00000422029 CPDO75976 1380 aa16.18■□□□□ 0.18
NDUFA3-208ENST00000422029 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
NDUFA3-208ENST00000422029 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
NDUFA3-208ENST00000422029 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
NDUFA3-208ENST00000422029 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
NDUFA3-208ENST00000422029 CAMKK2Q96RR4 588 aa16.17■□□□□ 0.18
NDUFA3-208ENST00000422029 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
NDUFA3-208ENST00000422029 RGPD1P0DJD0 1748 aa16.16■□□□□ 0.18
NDUFA3-208ENST00000422029 COL5A2P05997 1499 aaPredicted RBP16.16■□□□□ 0.18
NDUFA3-208ENST00000422029 PIK3C2AO00443 1686 aa16.15■□□□□ 0.18
NDUFA3-208ENST00000422029 CSB-PGBD3P0DP91 1061 aa16.15■□□□□ 0.18
NDUFA3-208ENST00000422029 PTF1AQ7RTS3 328 aa16.15■□□□□ 0.18
NDUFA3-208ENST00000422029 TNS1Q9HBL0 1735 aaKnown RBP16.15■□□□□ 0.18
NDUFA3-208ENST00000422029 KTN1Q86UP2 1357 aaKnown RBP16.14■□□□□ 0.17
NDUFA3-208ENST00000422029 NME9Q86XW9 330 aa16.13■□□□□ 0.17
NDUFA3-208ENST00000422029 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
NDUFA3-208ENST00000422029 SLC12A5Q9H2X9 1139 aa16.13■□□□□ 0.17
NDUFA3-208ENST00000422029 CRB1P82279 1406 aa16.12■□□□□ 0.17
NDUFA3-208ENST00000422029 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
NDUFA3-208ENST00000422029 SLIT3O75094 1523 aa16.12■□□□□ 0.17
NDUFA3-208ENST00000422029 AATKQ6ZMQ8 1374 aa16.12■□□□□ 0.17
NDUFA3-208ENST00000422029 THRAP3Q9Y2W1 955 aaKnown RBP16.11■□□□□ 0.17
NDUFA3-208ENST00000422029 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
NDUFA3-208ENST00000422029 TONSLQ96HA7 1378 aa16.11■□□□□ 0.17
NDUFA3-208ENST00000422029 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
NDUFA3-208ENST00000422029 DDB1Q16531 1140 aa16.1■□□□□ 0.17
NDUFA3-208ENST00000422029 SRCAPQ6ZRS2 3230 aa16.09■□□□□ 0.17
NDUFA3-208ENST00000422029 COL18A1P39060 1754 aa16.09■□□□□ 0.17
NDUFA3-208ENST00000422029 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
NDUFA3-208ENST00000422029 AKAP12Q02952 1782 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms